{"id":"https://openalex.org/W2029506861","doi":"https://doi.org/10.1093/nar/gkj093","title":"Argonaute--a database for gene regulation by mammalian microRNAs","display_name":"Argonaute--a database for gene regulation by mammalian microRNAs","publication_year":2005,"publication_date":"2005-12-28","ids":{"openalex":"https://openalex.org/W2029506861","doi":"https://doi.org/10.1093/nar/gkj093","mag":"2029506861","pmid":"https://pubmed.ncbi.nlm.nih.gov/16381827"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkj093","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkj093","pdf_url":"https://academic.oup.com/nar/article-pdf/34/suppl_1/D115/3925296/gkj093.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/34/suppl_1/D115/3925296/gkj093.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5079151637","display_name":"Priyanka Shahi","orcid":null},"institutions":[{"id":"https://openalex.org/I177802217","display_name":"University of Mannheim","ror":"https://ror.org/031bsb921","country_code":"DE","type":"education","lineage":["https://openalex.org/I177802217"]},{"id":"https://openalex.org/I223822909","display_name":"Heidelberg University","ror":"https://ror.org/038t36y30","country_code":"DE","type":"education","lineage":["https://openalex.org/I223822909"]},{"id":"https://openalex.org/I2802164966","display_name":"University Hospital Heidelberg","ror":"https://ror.org/013czdx64","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I2802164966"]},{"id":"https://openalex.org/I4210156450","display_name":"University Medical Centre Mannheim","ror":"https://ror.org/05sxbyd35","country_code":"DE","type":"funder","lineage":["https://openalex.org/I4210156450"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"P. Shahi","raw_affiliation_strings":["Medical Research Center, University Hospital, Mannheim D-68167 Mannheim, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Medical Research Center, University Hospital, Mannheim D-68167 Mannheim, Germany","institution_ids":["https://openalex.org/I177802217","https://openalex.org/I4210156450","https://openalex.org/I223822909","https://openalex.org/I2802164966"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5079151637"],"corresponding_institution_ids":["https://openalex.org/I177802217","https://openalex.org/I223822909","https://openalex.org/I2802164966","https://openalex.org/I4210156450"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":3.7555,"has_fulltext":false,"cited_by_count":82,"citation_normalized_percentile":{"value":0.94365756,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"34","issue":"90001","first_page":"D115","last_page":"D118"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.8748909831047058},{"id":"https://openalex.org/keywords/argonaute","display_name":"Argonaute","score":0.8225952386856079},{"id":"https://openalex.org/keywords/mirbase","display_name":"MiRBase","score":0.7849024534225464},{"id":"https://openalex.org/keywords/microrna","display_name":"microRNA","score":0.6521399617195129},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.559518039226532},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.48432934284210205},{"id":"https://openalex.org/keywords/regulation-of-gene-expression","display_name":"Regulation of gene expression","score":0.44144466519355774},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.43372124433517456},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.39537104964256287},{"id":"https://openalex.org/keywords/rna-interference","display_name":"RNA interference","score":0.24468013644218445},{"id":"https://openalex.org/keywords/rna","display_name":"RNA","score":0.10076811909675598},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.08326998353004456}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8748909831047058},{"id":"https://openalex.org/C201853390","wikidata":"https://www.wikidata.org/wiki/Q413236","display_name":"Argonaute","level":5,"score":0.8225952386856079},{"id":"https://openalex.org/C49305753","wikidata":"https://www.wikidata.org/wiki/Q6826947","display_name":"MiRBase","level":4,"score":0.7849024534225464},{"id":"https://openalex.org/C145059251","wikidata":"https://www.wikidata.org/wiki/Q310899","display_name":"microRNA","level":3,"score":0.6521399617195129},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.559518039226532},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.48432934284210205},{"id":"https://openalex.org/C165864922","wikidata":"https://www.wikidata.org/wiki/Q411391","display_name":"Regulation of gene expression","level":3,"score":0.44144466519355774},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.43372124433517456},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.39537104964256287},{"id":"https://openalex.org/C166703698","wikidata":"https://www.wikidata.org/wiki/Q201993","display_name":"RNA interference","level":4,"score":0.24468013644218445},{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.10076811909675598},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.08326998353004456}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005786","descriptor_name":"Gene Expression Regulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005786","descriptor_name":"Gene Expression Regulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005786","descriptor_name":"Gene Expression Regulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051381","descriptor_name":"Rats","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051381","descriptor_name":"Rats","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051381","descriptor_name":"Rats","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/nar/gkj093","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkj093","pdf_url":"https://academic.oup.com/nar/article-pdf/34/suppl_1/D115/3925296/gkj093.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:16381827","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/16381827","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:europepmc.org:156898","is_oa":false,"landing_page_url":"http://europepmc.org/pmc/articles/PMC1347455","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:1347455","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/1347455","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkj093","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkj093","pdf_url":"https://academic.oup.com/nar/article-pdf/34/suppl_1/D115/3925296/gkj093.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":23,"referenced_works":["https://openalex.org/W144423133","https://openalex.org/W1920303762","https://openalex.org/W2000904576","https://openalex.org/W2003632995","https://openalex.org/W2014946489","https://openalex.org/W2018507242","https://openalex.org/W2027862889","https://openalex.org/W2046930479","https://openalex.org/W2059382687","https://openalex.org/W2060711522","https://openalex.org/W2062290101","https://openalex.org/W2112253571","https://openalex.org/W2117391818","https://openalex.org/W2124268899","https://openalex.org/W2124756133","https://openalex.org/W2126669746","https://openalex.org/W2127861583","https://openalex.org/W2130979840","https://openalex.org/W2137257434","https://openalex.org/W2138664009","https://openalex.org/W2145928119","https://openalex.org/W2161149887","https://openalex.org/W2164687768"],"related_works":["https://openalex.org/W2160155716","https://openalex.org/W1984936950","https://openalex.org/W3204403294","https://openalex.org/W1969104747","https://openalex.org/W2106120562","https://openalex.org/W1238611492","https://openalex.org/W2966924062","https://openalex.org/W2014845588","https://openalex.org/W4315853590","https://openalex.org/W2777367386"],"abstract_inverted_index":{"MicroRNAs":[0],"(miRNAs)":[1],"constitute":[2],"a":[3,178,187,200,210],"recently":[4],"discovered":[5],"class":[6],"of":[7,14,22,116,181,186],"small":[8],"non-coding":[9],"RNAs":[10],"that":[11,170],"regulate":[12],"expression":[13,128],"target":[15,24,77,140,161],"genes":[16,78,141,162],"either":[17,205],"by":[18,27],"decreasing":[19],"the":[20,23,52,114,194],"stability":[21],"mRNA":[25],"or":[26,107,135,202,207],"translational":[28],"inhibition.":[29],"They":[30],"are":[31,60,163],"involved":[32,156],"in":[33,57,79,120,129,157],"diverse":[34],"processes,":[35],"including":[36,142],"cellular":[37],"differentiation,":[38],"proliferation":[39],"and":[40,75,94,132,151,177,223],"apoptosis.":[41],"Recent":[42],"evidence":[43],"also":[44],"suggests":[45],"their":[46,73],"importance":[47],"for":[48,199],"cancerogenesis.":[49],"By":[50],"far":[51],"most":[53],"important":[54],"model":[55],"systems":[56],"cancer":[58],"research":[59],"mammalian":[61,71],"organisms.":[62],"Thus,":[63],"we":[64],"decided":[65],"to":[66,99,154,165,196],"compile":[67],"comprehensive":[68,172],"information":[69,90,112,167,173,198,216],"on":[70,102,113,217],"miRNAs,":[72,204],"origin":[74,115],"regulated":[76],"an":[80,117,166],"exhaustive,":[81],"curated":[82],"database":[83],"called":[84],"Argonaute":[85,87,109,213],"(http://www.ma.uni-heidelberg.de/apps/zmf/argonaute/interface).":[86],"collects":[88],"latest":[89],"from":[91,174,220],"both":[92],"literature":[93],"other":[95],"databases.":[96],"In":[97],"contrast":[98],"current":[100],"databases":[101,176],"miRNAs":[103,219],"like":[104],"miRBase::Sequences,":[105],"NONCODE":[106],"RNAdb,":[108],"hosts":[110],"additional":[111],"miRNA,":[118],"i.e.":[119],"which":[121],"host":[122],"gene":[123],"it":[124],"is":[125],"encoded,":[126],"its":[127,133,138],"different":[130],"tissues":[131],"known":[134,153],"proposed":[136],"function,":[137],"potential":[139],"Gene":[143],"Ontology":[144],"annotation,":[145],"as":[146,148],"well":[147],"miRNA":[149,158],"families":[150],"proteins":[152],"be":[155],"processing.":[159],"Additionally,":[160],"linked":[164],"retrieval":[168],"system":[169],"provides":[171],"sequence":[175],"simultaneous":[179],"search":[180],"MEDLINE":[182],"with":[183],"all":[184],"synonyms":[185],"given":[188],"gene.":[189],"The":[190],"web":[191],"interface":[192],"allows":[193],"user":[195],"get":[197],"single":[201],"multiple":[203],"selected":[206],"uploaded":[208],"through":[209],"text":[211],"file.":[212],"currently":[214],"has":[215],"839":[218],"human,":[221],"mouse":[222],"rat.":[224]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":2},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":4},{"year":2013,"cited_by_count":4},{"year":2012,"cited_by_count":6}],"updated_date":"2026-05-19T21:40:30.786675","created_date":"2025-10-10T00:00:00"}
