{"id":"https://openalex.org/W2166636467","doi":"https://doi.org/10.1093/nar/gki111","title":"STING Report: convenient web-based application for graphic and tabular presentations of protein sequence, structure and function descriptors from the STING database","display_name":"STING Report: convenient web-based application for graphic and tabular presentations of protein sequence, structure and function descriptors from the STING database","publication_year":2004,"publication_date":"2004-12-17","ids":{"openalex":"https://openalex.org/W2166636467","doi":"https://doi.org/10.1093/nar/gki111","mag":"2166636467","pmid":"https://pubmed.ncbi.nlm.nih.gov/15608194"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gki111","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gki111","pdf_url":"https://academic.oup.com/nar/article-pdf/33/suppl_1/D269/7622313/gki111.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/nar/article-pdf/33/suppl_1/D269/7622313/gki111.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5076918011","display_name":"Goran Neshich","orcid":"https://orcid.org/0000-0003-4982-0416"},"institutions":[{"id":"https://openalex.org/I199691007","display_name":"Brazilian Agricultural Research Corporation","ror":"https://ror.org/0482b5b22","country_code":"BR","type":"government","lineage":["https://openalex.org/I199691007"]}],"countries":["BR"],"is_corresponding":true,"raw_author_name":"G. Neshich","raw_affiliation_strings":["N\u00facleo de Bioinform\u00e1tica Estrutural, Embrapa/Inform\u00e1tica Agropecu\u00e1ria, 13083-886 Campinas, Brazil. neshich@cnptia.embrapa.br","N\u00facleo de Bioinform\u00e1tica Estrutural"],"affiliations":[{"raw_affiliation_string":"N\u00facleo de Bioinform\u00e1tica Estrutural, Embrapa/Inform\u00e1tica Agropecu\u00e1ria, 13083-886 Campinas, Brazil. neshich@cnptia.embrapa.br","institution_ids":["https://openalex.org/I199691007"]},{"raw_affiliation_string":"N\u00facleo de Bioinform\u00e1tica Estrutural","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5076918011"],"corresponding_institution_ids":["https://openalex.org/I199691007"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":0.9647,"has_fulltext":true,"cited_by_count":26,"citation_normalized_percentile":{"value":0.73630569,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"33","issue":"Database issue","first_page":"D269","last_page":"D274"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9962999820709229,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9962999820709229,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9955999851226807,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9718000292778015,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/sting","display_name":"Sting","score":0.9223127961158752},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5492661595344543},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.5163901448249817},{"id":"https://openalex.org/keywords/function","display_name":"Function (biology)","score":0.4260958433151245},{"id":"https://openalex.org/keywords/documentation","display_name":"Documentation","score":0.41887474060058594},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.3316156566143036},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.29699504375457764},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.15753018856048584},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.1145472526550293}],"concepts":[{"id":"https://openalex.org/C2779300339","wikidata":"https://www.wikidata.org/wiki/Q7617409","display_name":"Sting","level":2,"score":0.9223127961158752},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5492661595344543},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.5163901448249817},{"id":"https://openalex.org/C14036430","wikidata":"https://www.wikidata.org/wiki/Q3736076","display_name":"Function (biology)","level":2,"score":0.4260958433151245},{"id":"https://openalex.org/C56666940","wikidata":"https://www.wikidata.org/wiki/Q788790","display_name":"Documentation","level":2,"score":0.41887474060058594},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.3316156566143036},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.29699504375457764},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.15753018856048584},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.1145472526550293},{"id":"https://openalex.org/C97355855","wikidata":"https://www.wikidata.org/wiki/Q11473","display_name":"Thermodynamics","level":1,"score":0.0},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000596","descriptor_name":"Amino Acids","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D000596","descriptor_name":"Amino Acids","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D000596","descriptor_name":"Amino Acids","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D000596","descriptor_name":"Amino Acids","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":5,"locations":[{"id":"doi:10.1093/nar/gki111","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gki111","pdf_url":"https://academic.oup.com/nar/article-pdf/33/suppl_1/D269/7622313/gki111.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:15608194","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/15608194","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:HAL:hal-01092988v1","is_oa":true,"landing_page_url":"https://inria.hal.science/hal-01092988","pdf_url":null,"source":null,"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Research, 2005, Database issue, 33, pp.D269-D274. &#x27E8;10.1093/nar/gki111&#x27E9;","raw_type":"Journal articles"},{"id":"pmh:oai:europepmc.org:163553","is_oa":false,"landing_page_url":"http://europepmc.org/pmc/articles/PMC540065","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:540065","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/540065","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gki111","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gki111","pdf_url":"https://academic.oup.com/nar/article-pdf/33/suppl_1/D269/7622313/gki111.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2531298479","display_name":"Criacao de um centro para a pesquisa e oferta de servicos em bioinformatica (cb).","funder_award_id":"01/08895-0","funder_id":"https://openalex.org/F4320320997","funder_display_name":"Funda\u00e7\u00e3o de Amparo \u00e0 Pesquisa do Estado de S\u00e3o Paulo"}],"funders":[{"id":"https://openalex.org/F4320320997","display_name":"Funda\u00e7\u00e3o de Amparo \u00e0 Pesquisa do Estado de S\u00e3o Paulo","ror":"https://ror.org/02ddkpn78"},{"id":"https://openalex.org/F4320322025","display_name":"Conselho Nacional de Desenvolvimento Cient\u00edfico e Tecnol\u00f3gico","ror":"https://ror.org/03swz6y49"},{"id":"https://openalex.org/F4320322904","display_name":"Financiadora de Estudos e Projetos","ror":"https://ror.org/030w99567"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2166636467.pdf","grobid_xml":"https://content.openalex.org/works/W2166636467.grobid-xml"},"referenced_works_count":21,"referenced_works":["https://openalex.org/W64749174","https://openalex.org/W1533208683","https://openalex.org/W2008708467","https://openalex.org/W2049902088","https://openalex.org/W2054668663","https://openalex.org/W2059284454","https://openalex.org/W2099254366","https://openalex.org/W2105918329","https://openalex.org/W2106315897","https://openalex.org/W2110562802","https://openalex.org/W2115592403","https://openalex.org/W2130479394","https://openalex.org/W2133662205","https://openalex.org/W2141920771","https://openalex.org/W2152705200","https://openalex.org/W2157007944","https://openalex.org/W2158934671","https://openalex.org/W2163352757","https://openalex.org/W2166233246","https://openalex.org/W2171742422","https://openalex.org/W4232850925"],"related_works":["https://openalex.org/W4225487095","https://openalex.org/W4393986926","https://openalex.org/W4392534327","https://openalex.org/W345289938","https://openalex.org/W3007894895","https://openalex.org/W2921719989","https://openalex.org/W1664219817","https://openalex.org/W1992394708","https://openalex.org/W4311046939","https://openalex.org/W4328050399"],"abstract_inverted_index":{"The":[0,29,51,61,132],"Sting":[1],"Report":[2,68,139,157],"is":[3,32,158],"a":[4,21,35,83,94,98,110,118,141,146],"versatile":[5],"web-based":[6],"application":[7],"for":[8,103,117,120,149],"extraction":[9],"and":[10,40,80,123,126,170],"presentation":[11],"of":[12,20,37,45,100,106,128,134,153],"detailed":[13,124],"information":[14,31,135],"about":[15,130],"any":[16],"individual":[17],"amino":[18,104],"acid":[19],"protein":[22],"structure":[23],"stored":[24],"in":[25,140],"the":[26,43,57,66,91,121,150,162],"STING":[27,59,67,92,138,156,164,173],"Database.":[28],"extracted":[30],"presented":[33],"as":[34,113],"series":[36],"GIF":[38,52],"images":[39,53],"tables,":[41],"containing":[42],"values":[44],"up":[46],"to":[47],"125":[48],"sequence/structure/function":[49],"descriptors/parameters.":[50],"are":[54],"generated":[55,136],"by":[56],"Gold":[58,163],"modules.":[60],"HTML":[62],"page":[63],"resulting":[64],"from":[65],"query":[69],"can":[70,77,96],"be":[71,78],"printed":[72],"and,":[73],"most":[74],"importantly,":[75],"it":[76],"composed":[79],"visualized":[81],"on":[82],"computer":[84],"platform":[85],"with":[86,137],"an":[87,114],"elementary":[88],"configuration.":[89],"Using":[90],"Report,":[93],"user":[95],"generate":[97],"collection":[99,111],"customized":[101],"reports":[102],"acids":[105],"specific":[107],"interest.":[108],"Such":[109],"comes":[112],"ideal":[115],"match":[116],"demand":[119],"rapid":[122],"consultation":[125],"documentation":[127],"data":[129],"structure/function.":[131],"inclusion":[133],"research":[142],"report":[143],"or":[144],"even":[145],"textbook,":[147],"allows":[148],"increased":[151],"density":[152],"its":[154],"contents.":[155],"freely":[159],"accessible":[160],"within":[161],"Suite":[165],"at":[166],"http://www.cbi.cnptia.embrapa.br,":[167],"http://www.es.embnet.org/SMS/,":[168],"http://gibk26.bse.kyutech.ac.jp/SMS/":[169],"http://trantor.bioc.columbia.edu/SMS":[171],"(option:":[172],"Report).":[174]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":2},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":3},{"year":2016,"cited_by_count":1},{"year":2014,"cited_by_count":3},{"year":2013,"cited_by_count":1},{"year":2012,"cited_by_count":1}],"updated_date":"2026-04-21T08:09:41.155169","created_date":"2025-10-10T00:00:00"}
