{"id":"https://openalex.org/W2121293808","doi":"https://doi.org/10.1093/nar/gkh477","title":"SuperPose: a simple server for sophisticated structural superposition","display_name":"SuperPose: a simple server for sophisticated structural superposition","publication_year":2004,"publication_date":"2004-07-01","ids":{"openalex":"https://openalex.org/W2121293808","doi":"https://doi.org/10.1093/nar/gkh477","mag":"2121293808","pmid":"https://pubmed.ncbi.nlm.nih.gov/15215457"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkh477","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkh477","pdf_url":"https://academic.oup.com/nar/article-pdf/32/suppl_2/W590/6211965/gkh477.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/nar/article-pdf/32/suppl_2/W590/6211965/gkh477.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5039345792","display_name":"R. Maiti","orcid":"https://orcid.org/0000-0001-5534-7149"},"institutions":[{"id":"https://openalex.org/I154425047","display_name":"University of Alberta","ror":"https://ror.org/0160cpw27","country_code":"CA","type":"education","lineage":["https://openalex.org/I154425047"]}],"countries":["CA"],"is_corresponding":true,"raw_author_name":"R. Maiti","raw_affiliation_strings":["Departments of Biological Sciences and Computing Science, University of Alberta, Edmonton, AB, T6G 2E8, Canada","Departments of Biological Sciences and Computing Science, University of Alberta  Edmonton, AB, T6G 2E8, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Departments of Biological Sciences and Computing Science, University of Alberta, Edmonton, AB, T6G 2E8, Canada","institution_ids":["https://openalex.org/I154425047"]},{"raw_affiliation_string":"Departments of Biological Sciences and Computing Science, University of Alberta  Edmonton, AB, T6G 2E8, Canada","institution_ids":["https://openalex.org/I154425047"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045547676","display_name":"Gary H. Van Domselaar","orcid":null},"institutions":[{"id":"https://openalex.org/I154425047","display_name":"University of Alberta","ror":"https://ror.org/0160cpw27","country_code":"CA","type":"education","lineage":["https://openalex.org/I154425047"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"G. H. Van Domselaar","raw_affiliation_strings":["Departments of Biological Sciences and Computing Science, University of Alberta, Edmonton, AB, T6G 2E8, Canada","Departments of Biological Sciences and Computing Science, University of Alberta  Edmonton, AB, T6G 2E8, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Departments of Biological Sciences and Computing Science, University of Alberta, Edmonton, AB, T6G 2E8, Canada","institution_ids":["https://openalex.org/I154425047"]},{"raw_affiliation_string":"Departments of Biological Sciences and Computing Science, University of Alberta  Edmonton, AB, T6G 2E8, Canada","institution_ids":["https://openalex.org/I154425047"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046966155","display_name":"Hong Zhang","orcid":"https://orcid.org/0000-0003-2746-1846"},"institutions":[{"id":"https://openalex.org/I154425047","display_name":"University of Alberta","ror":"https://ror.org/0160cpw27","country_code":"CA","type":"education","lineage":["https://openalex.org/I154425047"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"H. Zhang","raw_affiliation_strings":["Departments of Biological Sciences and Computing Science, University of Alberta, Edmonton, AB, T6G 2E8, Canada","Departments of Biological Sciences and Computing Science, University of Alberta  Edmonton, AB, T6G 2E8, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Departments of Biological Sciences and Computing Science, University of Alberta, Edmonton, AB, T6G 2E8, Canada","institution_ids":["https://openalex.org/I154425047"]},{"raw_affiliation_string":"Departments of Biological Sciences and Computing Science, University of Alberta  Edmonton, AB, T6G 2E8, Canada","institution_ids":["https://openalex.org/I154425047"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5003573061","display_name":"David S. Wishart","orcid":"https://orcid.org/0000-0002-3207-2434"},"institutions":[{"id":"https://openalex.org/I154425047","display_name":"University of Alberta","ror":"https://ror.org/0160cpw27","country_code":"CA","type":"education","lineage":["https://openalex.org/I154425047"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"D. S. Wishart","raw_affiliation_strings":["Departments of Biological Sciences and Computing Science, University of Alberta, Edmonton, AB, T6G 2E8, Canada","Departments of Biological Sciences and Computing Science, University of Alberta  Edmonton, AB, T6G 2E8, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Departments of Biological Sciences and Computing Science, University of Alberta, Edmonton, AB, T6G 2E8, Canada","institution_ids":["https://openalex.org/I154425047"]},{"raw_affiliation_string":"Departments of Biological Sciences and Computing Science, University of Alberta  Edmonton, AB, T6G 2E8, Canada","institution_ids":["https://openalex.org/I154425047"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5039345792"],"corresponding_institution_ids":["https://openalex.org/I154425047"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":null,"fwci":4.5341,"has_fulltext":true,"cited_by_count":633,"citation_normalized_percentile":{"value":0.95675094,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":100},"biblio":{"volume":"32","issue":"Web Server","first_page":"W590","last_page":"W594"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11162","display_name":"Enzyme Structure and Function","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.995199978351593,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.7865235805511475},{"id":"https://openalex.org/keywords/superposition-principle","display_name":"Superposition principle","score":0.6425415277481079},{"id":"https://openalex.org/keywords/simple","display_name":"Simple (philosophy)","score":0.5729705691337585},{"id":"https://openalex.org/keywords/web-server","display_name":"Web server","score":0.5432863831520081},{"id":"https://openalex.org/keywords/pairwise-comparison","display_name":"Pairwise comparison","score":0.5190001726150513},{"id":"https://openalex.org/keywords/protein-data-bank","display_name":"Protein Data Bank (RCSB PDB)","score":0.5120058655738831},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.511634886264801},{"id":"https://openalex.org/keywords/range","display_name":"Range (aeronautics)","score":0.44952714443206787},{"id":"https://openalex.org/keywords/quaternion","display_name":"Quaternion","score":0.4443269371986389},{"id":"https://openalex.org/keywords/interface","display_name":"Interface (matter)","score":0.41567325592041016},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.2511584162712097},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.22963085770606995},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.17943337559700012},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.1738501489162445},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.15086513757705688},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.14598709344863892},{"id":"https://openalex.org/keywords/the-internet","display_name":"The Internet","score":0.14269909262657166},{"id":"https://openalex.org/keywords/geometry","display_name":"Geometry","score":0.0825437605381012}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7865235805511475},{"id":"https://openalex.org/C27753989","wikidata":"https://www.wikidata.org/wiki/Q284885","display_name":"Superposition principle","level":2,"score":0.6425415277481079},{"id":"https://openalex.org/C2780586882","wikidata":"https://www.wikidata.org/wiki/Q7520643","display_name":"Simple (philosophy)","level":2,"score":0.5729705691337585},{"id":"https://openalex.org/C11392498","wikidata":"https://www.wikidata.org/wiki/Q11288","display_name":"Web server","level":3,"score":0.5432863831520081},{"id":"https://openalex.org/C184898388","wikidata":"https://www.wikidata.org/wiki/Q1435712","display_name":"Pairwise comparison","level":2,"score":0.5190001726150513},{"id":"https://openalex.org/C65556437","wikidata":"https://www.wikidata.org/wiki/Q766195","display_name":"Protein Data Bank (RCSB PDB)","level":2,"score":0.5120058655738831},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.511634886264801},{"id":"https://openalex.org/C204323151","wikidata":"https://www.wikidata.org/wiki/Q905424","display_name":"Range (aeronautics)","level":2,"score":0.44952714443206787},{"id":"https://openalex.org/C200127275","wikidata":"https://www.wikidata.org/wiki/Q173853","display_name":"Quaternion","level":2,"score":0.4443269371986389},{"id":"https://openalex.org/C113843644","wikidata":"https://www.wikidata.org/wiki/Q901882","display_name":"Interface (matter)","level":4,"score":0.41567325592041016},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.2511584162712097},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.22963085770606995},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.17943337559700012},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.1738501489162445},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.15086513757705688},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.14598709344863892},{"id":"https://openalex.org/C110875604","wikidata":"https://www.wikidata.org/wiki/Q75","display_name":"The Internet","level":2,"score":0.14269909262657166},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.0825437605381012},{"id":"https://openalex.org/C146978453","wikidata":"https://www.wikidata.org/wiki/Q3798668","display_name":"Aerospace engineering","level":1,"score":0.0},{"id":"https://openalex.org/C58226133","wikidata":"https://www.wikidata.org/wiki/Q1324199","display_name":"Pulmonary surfactant","level":2,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C55352822","wikidata":"https://www.wikidata.org/wiki/Q5558978","display_name":"Gibbs isotherm","level":3,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D040681","descriptor_name":"Structural Homology, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D040681","descriptor_name":"Structural Homology, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D040681","descriptor_name":"Structural Homology, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":5,"locations":[{"id":"doi:10.1093/nar/gkh477","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkh477","pdf_url":"https://academic.oup.com/nar/article-pdf/32/suppl_2/W590/6211965/gkh477.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:15215457","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/15215457","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.85.2222","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.85.2222","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://wishart.biology.ualberta.ca/SuperPose/SuperPose.pdf","raw_type":"text"},{"id":"pmh:oai:europepmc.org:162848","is_oa":false,"landing_page_url":"http://europepmc.org/pmc/articles/PMC441615","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:441615","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/441615","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkh477","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkh477","pdf_url":"https://academic.oup.com/nar/article-pdf/32/suppl_2/W590/6211965/gkh477.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320310787","display_name":"Genome Canada","ror":"https://ror.org/029s29983"},{"id":"https://openalex.org/F4320326647","display_name":"Genome Prairie","ror":"https://ror.org/013s3gf12"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2121293808.pdf","grobid_xml":"https://content.openalex.org/works/W2121293808.grobid-xml"},"referenced_works_count":13,"referenced_works":["https://openalex.org/W1532888376","https://openalex.org/W1965151258","https://openalex.org/W2002195659","https://openalex.org/W2012334384","https://openalex.org/W2028231353","https://openalex.org/W2067129729","https://openalex.org/W2074231493","https://openalex.org/W2083334314","https://openalex.org/W2105321472","https://openalex.org/W2105844209","https://openalex.org/W2108107014","https://openalex.org/W2118851904","https://openalex.org/W2133956643"],"related_works":["https://openalex.org/W3127350447","https://openalex.org/W3108700312","https://openalex.org/W2887325221","https://openalex.org/W4225472102","https://openalex.org/W2382948573","https://openalex.org/W2184550115","https://openalex.org/W2013211627","https://openalex.org/W2032140021","https://openalex.org/W3038491195","https://openalex.org/W2069319199"],"abstract_inverted_index":{"The":[0,124],"SuperPose":[1,21,51,75,125],"web":[2,126],"server":[3,127],"rapidly":[4],"and":[5,10,32,41,45,103,109],"robustly":[6],"calculates":[7],"both":[8],"pairwise":[9],"multiple":[11],"protein":[12],"structure":[13,25],"superpositions":[14],"using":[15],"a":[16,53,96],"modified":[17],"quaternion":[18],"eigenvalue":[19],"approach.":[20],"generates":[22],"sequence":[23],"alignments,":[24,26],"PDB":[27,59],"(Protein":[28],"Data":[29],"Bank)":[30],"coordinates":[31],"RMSD":[33],"statistics,":[34],"as":[35,37,64],"well":[36],"difference":[38],"distance":[39],"plots":[40],"images":[42],"(both":[43],"static":[44],"interactive)":[46],"of":[47,94,100],"the":[48,73],"superimposed":[49],"molecules.":[50],"employs":[52],"simple":[54],"interface":[55],"that":[56,82,112],"requires":[57],"only":[58],"files":[60],"or":[61,88,121],"accession":[62],"numbers":[63],"input.":[65],"All":[66],"other":[67],"superposition":[68,101],"decisions":[69],"are":[70,113],"made":[71],"by":[72],"program.":[74],"is":[76,91,128],"uniquely":[77],"able":[78],"to":[79],"superimpose":[80],"structures":[81],"differ":[83],"substantially":[84],"in":[85,116],"sequence,":[86],"size":[87],"shape.":[89],"It":[90],"also":[92],"capable":[93],"handling":[95],"much":[97],"larger":[98],"range":[99],"queries":[102],"situations":[104],"than":[105],"many":[106],"standalone":[107],"programs":[108],"yields":[110],"results":[111],"intuitively":[114],"more":[115],"agreement":[117],"with":[118],"known":[119],"biological":[120],"structural":[122],"data.":[123],"freely":[129],"accessible":[130],"at":[131],"http://wishart.biology.ualberta.ca/SuperPose/.":[132]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":10},{"year":2024,"cited_by_count":18},{"year":2023,"cited_by_count":31},{"year":2022,"cited_by_count":31},{"year":2021,"cited_by_count":39},{"year":2020,"cited_by_count":58},{"year":2019,"cited_by_count":38},{"year":2018,"cited_by_count":31},{"year":2017,"cited_by_count":37},{"year":2016,"cited_by_count":40},{"year":2015,"cited_by_count":35},{"year":2014,"cited_by_count":48},{"year":2013,"cited_by_count":48},{"year":2012,"cited_by_count":28}],"updated_date":"2026-07-15T18:14:33.161393","created_date":"2025-10-10T00:00:00"}
