{"id":"https://openalex.org/W2124244625","doi":"https://doi.org/10.1093/nar/gkh399","title":"IsoFinder: computational prediction of isochores in genome sequences","display_name":"IsoFinder: computational prediction of isochores in genome sequences","publication_year":2004,"publication_date":"2004-07-01","ids":{"openalex":"https://openalex.org/W2124244625","doi":"https://doi.org/10.1093/nar/gkh399","mag":"2124244625","pmid":"https://pubmed.ncbi.nlm.nih.gov/15215396"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkh399","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkh399","pdf_url":"https://academic.oup.com/nar/article-pdf/32/suppl_2/W287/6209164/gkh399.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/nar/article-pdf/32/suppl_2/W287/6209164/gkh399.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5009966967","display_name":"Jos\u00e9 Luis Tejera Oliver","orcid":"https://orcid.org/0000-0003-0216-0393"},"institutions":[{"id":"https://openalex.org/I173304897","display_name":"Universidad de Granada","ror":"https://ror.org/04njjy449","country_code":"ES","type":"education","lineage":["https://openalex.org/I173304897"]},{"id":"https://openalex.org/I4210146045","display_name":"Instituto de Biotecnolog\u00eda de Le\u00f3n","ror":"https://ror.org/03ry8wj79","country_code":"ES","type":"nonprofit","lineage":["https://openalex.org/I4210146045"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"J. L. Oliver","raw_affiliation_strings":["Departamento de Gen\u00e9tica, Instituto de Biotecnolog\u00eda, Facultad de Ciencias, Universidad de Granada, Spain. oliver@ugr.es","Departamento de Gen\u00e9tica, Instituto de Biotecnolog\u00eda, Facultad de Ciencias, Universidad de Granada, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Departamento de Gen\u00e9tica, Instituto de Biotecnolog\u00eda, Facultad de Ciencias, Universidad de Granada, Spain. oliver@ugr.es","institution_ids":["https://openalex.org/I173304897"]},{"raw_affiliation_string":"Departamento de Gen\u00e9tica, Instituto de Biotecnolog\u00eda, Facultad de Ciencias, Universidad de Granada, Spain","institution_ids":["https://openalex.org/I173304897","https://openalex.org/I4210146045"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074555181","display_name":"Pedro Carpena","orcid":"https://orcid.org/0000-0001-5568-0216"},"institutions":[{"id":"https://openalex.org/I130194489","display_name":"University of Alicante","ror":"https://ror.org/05t8bcz72","country_code":"ES","type":"education","lineage":["https://openalex.org/I130194489"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"P. Carpena","raw_affiliation_strings":["Departamento de F sica Aplicada II, Universidad de Ma laga, Spain","Departamento de F\u0131 \u00b4sica Aplicada II, Universidad de Ma \u00b4laga, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Departamento de F sica Aplicada II, Universidad de Ma laga, Spain","institution_ids":["https://openalex.org/I130194489"]},{"raw_affiliation_string":"Departamento de F\u0131 \u00b4sica Aplicada II, Universidad de Ma \u00b4laga, Spain","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084745527","display_name":"Michael Hackenberg","orcid":"https://orcid.org/0000-0003-2248-3114"},"institutions":[{"id":"https://openalex.org/I173304897","display_name":"Universidad de Granada","ror":"https://ror.org/04njjy449","country_code":"ES","type":"education","lineage":["https://openalex.org/I173304897"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"M. Hackenberg","raw_affiliation_strings":["Departamento de Gene \u00b4tica, Instituto de Biotecnolog\u0131 \u00b4a, Facultad de Ciencias, Universidad de Granada and"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Departamento de Gene \u00b4tica, Instituto de Biotecnolog\u0131 \u00b4a, Facultad de Ciencias, Universidad de Granada and","institution_ids":["https://openalex.org/I173304897"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5050320939","display_name":"Pedro Bernaola\u2010Galv\u00e1n","orcid":"https://orcid.org/0000-0002-2895-3116"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"P. Bernaola-Galvan","raw_affiliation_strings":["Departamento de F\u0131 \u00b4sica Aplicada II, Universidad de Ma \u00b4laga, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Departamento de F\u0131 \u00b4sica Aplicada II, Universidad de Ma \u00b4laga, Spain","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":3.0148,"has_fulltext":true,"cited_by_count":105,"citation_normalized_percentile":{"value":0.91565764,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"32","issue":"Web Server","first_page":"W287","last_page":"W292"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/pointer","display_name":"Pointer (user interface)","score":0.5998484492301941},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5996440052986145},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.582282304763794},{"id":"https://openalex.org/keywords/homogeneous","display_name":"Homogeneous","score":0.4535943865776062},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4307059049606323},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.4212414026260376},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.4047817587852478},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.28260958194732666},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.24326792359352112},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.22688603401184082},{"id":"https://openalex.org/keywords/combinatorics","display_name":"Combinatorics","score":0.2157721221446991},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.19942018389701843}],"concepts":[{"id":"https://openalex.org/C150202949","wikidata":"https://www.wikidata.org/wiki/Q107602","display_name":"Pointer (user interface)","level":2,"score":0.5998484492301941},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5996440052986145},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.582282304763794},{"id":"https://openalex.org/C66882249","wikidata":"https://www.wikidata.org/wiki/Q169336","display_name":"Homogeneous","level":2,"score":0.4535943865776062},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4307059049606323},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.4212414026260376},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.4047817587852478},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.28260958194732666},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.24326792359352112},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.22688603401184082},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.2157721221446991},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.19942018389701843}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008285","descriptor_name":"Major Histocompatibility Complex","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008285","descriptor_name":"Major Histocompatibility Complex","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008285","descriptor_name":"Major Histocompatibility Complex","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008285","descriptor_name":"Major Histocompatibility Complex","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D032085","descriptor_name":"Isochores","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D032085","descriptor_name":"Isochores","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D032085","descriptor_name":"Isochores","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D032085","descriptor_name":"Isochores","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false}],"locations_count":7,"locations":[{"id":"doi:10.1093/nar/gkh399","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkh399","pdf_url":"https://academic.oup.com/nar/article-pdf/32/suppl_2/W287/6209164/gkh399.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:15215396","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/15215396","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:dnet:digibug_____::7176958878cd05503a3d0d2b3e865d40","is_oa":true,"landing_page_url":"http://hdl.handle.net/10481/32621","pdf_url":"http://hdl.handle.net/10481/32621","source":{"id":"https://openalex.org/S4306402641","display_name":"LA Referencia (Red Federada de Repositorios Institucionales de Publicaciones Cient\u00edficas)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4383465926","host_organization_name":"LA Referencia","host_organization_lineage":["https://openalex.org/I4383465926"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.66.7455","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.66.7455","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://bioinfo2.ugr.es/publi/IsoFinder_NAR_04.pdf","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.969.4471","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.969.4471","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://nar.oxfordjournals.org/content/32/suppl_2/W287.full.pdf","raw_type":"text"},{"id":"pmh:oai:europepmc.org:162774","is_oa":false,"landing_page_url":"http://europepmc.org/pmc/articles/PMC441537","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:441537","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/441537","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkh399","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkh399","pdf_url":"https://academic.oup.com/nar/article-pdf/32/suppl_2/W287/6209164/gkh399.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320323834","display_name":"Universidad de Granada","ror":"https://ror.org/04njjy449"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2124244625.pdf","grobid_xml":"https://content.openalex.org/works/W2124244625.grobid-xml"},"referenced_works_count":34,"referenced_works":["https://openalex.org/W1484915261","https://openalex.org/W1497954397","https://openalex.org/W1510523291","https://openalex.org/W1535880051","https://openalex.org/W1796859420","https://openalex.org/W1963602582","https://openalex.org/W1966673552","https://openalex.org/W1970475996","https://openalex.org/W1974285587","https://openalex.org/W1982126317","https://openalex.org/W2011728520","https://openalex.org/W2022307325","https://openalex.org/W2022624051","https://openalex.org/W2038359695","https://openalex.org/W2041677039","https://openalex.org/W2064907390","https://openalex.org/W2068367266","https://openalex.org/W2072603366","https://openalex.org/W2079946173","https://openalex.org/W2090429051","https://openalex.org/W2091957391","https://openalex.org/W2092464006","https://openalex.org/W2093945323","https://openalex.org/W2094284586","https://openalex.org/W2109899970","https://openalex.org/W2118186354","https://openalex.org/W2125609130","https://openalex.org/W2131669390","https://openalex.org/W2155387468","https://openalex.org/W2163446565","https://openalex.org/W2168029153","https://openalex.org/W2168909179","https://openalex.org/W2169153685","https://openalex.org/W2297165308"],"related_works":["https://openalex.org/W2387387477","https://openalex.org/W2394051415","https://openalex.org/W4255928847","https://openalex.org/W4388218401","https://openalex.org/W2352114091","https://openalex.org/W121845590","https://openalex.org/W4241809317","https://openalex.org/W2379950384","https://openalex.org/W123216772","https://openalex.org/W2742327519"],"abstract_inverted_index":{"Isochores":[0],"are":[1,224],"long":[2,165,208],"genome":[3,167],"segments":[4],"homogeneous":[5,166],"in":[6],"G+C.":[7],"Here,":[8],"we":[9,46,89],"describe":[10],"an":[11],"algorithm":[12],"(IsoFinder)":[13],"running":[14],"on":[15],"the":[16,24,37,44,48,53,57,60,65,68,72,83,91,113,125,136,147,158,179,183,234],"web":[17,228],"(http://bioinfo2.ugr.es/IsoF/isofinder.html)":[18],"able":[19],"to":[20,34,52,56,157],"predict":[21],"isochores":[22],"at":[23,129,226,233],"sequence":[25,126,137,163],"level.":[26],"We":[27,62],"move":[28],"a":[29,109,120,161],"sliding":[30],"pointer":[31,69],"from":[32,178],"left":[33,54,75],"right":[35,58,77],"along":[36],"DNA":[38],"sequence.":[39],"At":[40],"each":[41,145,153,175],"position":[42,66],"of":[43,59,67,94,146,160,182],"pointer,":[45],"compute":[47],"mean":[49,78,172],"G+C":[50,173,180],"values":[51,79],"and":[55,76,205,231],"pointer.":[61],"then":[63],"determine":[64,90],"for":[70,144],"which":[71],"difference":[73],"between":[74],"(as":[80],"measured":[81],"by":[82,107,152],"t-statistic)":[84],"reaches":[85],"its":[86],"maximum.":[87],"Next,":[88],"statistical":[92],"significance":[93,118],"this":[95,117,130],"potential":[96],"cutting":[97],"point,":[98],"after":[99],"filtering":[100],"out":[101],"short-scale":[102],"heterogeneities":[103],"below":[104],"3":[105],"kb":[106],"applying":[108],"coarse-graining":[110],"technique.":[111],"Finally,":[112],"program":[114],"checks":[115],"whether":[116],"exceeds":[119],"probability":[121],"threshold.":[122],"If":[123],"so,":[124],"is":[127],"cut":[128],"point":[131],"into":[132,164],"two":[133,148],"subsequences;":[134],"otherwise,":[135],"remains":[138],"undivided.":[139],"The":[140,220],"procedure":[141],"continues":[142],"recursively":[143],"resulting":[149,221],"subsequences":[150],"created":[151],"cut.":[154],"This":[155],"leads":[156],"decomposition":[159],"chromosome":[162],"regions":[168],"(LHGRs)":[169],"with":[170,191,197],"well-defined":[171],"contents,":[174],"significantly":[176],"different":[177],"contents":[181],"adjacent":[184],"LHGRs.":[185],"Most":[186],"LHGRs":[187],"can":[188],"be":[189],"identified":[190],"Bernardi's":[192],"isochores,":[193],"given":[194],"their":[195],"correlation":[196],"biological":[198],"features":[199],"such":[200],"as":[201],"gene":[202],"density,":[203],"SINE":[204],"LINE":[206],"(short,":[207],"interspersed":[209],"repetitive":[210],"elements)":[211],"densities,":[212],"recombination":[213],"rate":[214],"or":[215],"single":[216],"nucleotide":[217],"polymorphism":[218],"variability.":[219],"isochore":[222],"maps":[223],"available":[225],"our":[227],"site":[229],"(http://bioinfo2.ugr.es/isochores/),":[230],"also":[232],"UCSC":[235],"Genome":[236],"Browser":[237],"(http://genome.cse.ucsc.edu/).":[238]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":12},{"year":2023,"cited_by_count":4},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":3},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":3},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":4},{"year":2014,"cited_by_count":4},{"year":2013,"cited_by_count":6},{"year":2012,"cited_by_count":5}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
