{"id":"https://openalex.org/W2045319488","doi":"https://doi.org/10.1093/nar/gkh122","title":"The Eukaryotic Promoter Database EPD: the impact of in silico primer extension","display_name":"The Eukaryotic Promoter Database EPD: the impact of in silico primer extension","publication_year":2003,"publication_date":"2003-12-18","ids":{"openalex":"https://openalex.org/W2045319488","doi":"https://doi.org/10.1093/nar/gkh122","mag":"2045319488","pmid":"https://pubmed.ncbi.nlm.nih.gov/14681364"},"language":"es","primary_location":{"id":"doi:10.1093/nar/gkh122","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkh122","pdf_url":"https://academic.oup.com/nar/article-pdf/32/suppl_1/D82/7622073/gkh122.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/nar/article-pdf/32/suppl_1/D82/7622073/gkh122.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5105777249","display_name":"Christof Schmid","orcid":null},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]}],"countries":["CH"],"is_corresponding":true,"raw_author_name":"C. D. Schmid","raw_affiliation_strings":["Swiss Institute of Bioinformatics, Ch. des Boveresses 155, 1066 Epalinges s/Lausanne, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Swiss Institute of Bioinformatics, Ch. des Boveresses 155, 1066 Epalinges s/Lausanne, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5105777249"],"corresponding_institution_ids":["https://openalex.org/I12708293"],"apc_list":{"value":3992,"currency":"USD","value_usd":3992},"apc_paid":null,"fwci":5.4714,"has_fulltext":true,"cited_by_count":95,"citation_normalized_percentile":{"value":0.96833795,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"32","issue":"90001","first_page":"82D","last_page":"85"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9980000257492065,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/in-silico","display_name":"In silico","score":0.7285807132720947},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.708808958530426},{"id":"https://openalex.org/keywords/primer-extension","display_name":"Primer extension","score":0.6450969576835632},{"id":"https://openalex.org/keywords/promoter","display_name":"Promoter","score":0.5978108048439026},{"id":"https://openalex.org/keywords/sequence-database","display_name":"Sequence database","score":0.5668251514434814},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5441144704818726},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.5301918387413025},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.5045527219772339},{"id":"https://openalex.org/keywords/expressed-sequence-tag","display_name":"Expressed sequence tag","score":0.4671810269355774},{"id":"https://openalex.org/keywords/consensus-sequence","display_name":"Consensus sequence","score":0.4164705276489258},{"id":"https://openalex.org/keywords/sequence-analysis","display_name":"Sequence analysis","score":0.41239356994628906},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.3991852402687073},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.3990169167518616},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.33999836444854736},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.30893659591674805},{"id":"https://openalex.org/keywords/complementary-dna","display_name":"Complementary DNA","score":0.2983083128929138},{"id":"https://openalex.org/keywords/peptide-sequence","display_name":"Peptide sequence","score":0.15843269228935242},{"id":"https://openalex.org/keywords/base-sequence","display_name":"Base sequence","score":0.1413860321044922},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.12225040793418884}],"concepts":[{"id":"https://openalex.org/C2775905019","wikidata":"https://www.wikidata.org/wiki/Q192572","display_name":"In silico","level":3,"score":0.7285807132720947},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.708808958530426},{"id":"https://openalex.org/C194857396","wikidata":"https://www.wikidata.org/wiki/Q382878","display_name":"Primer extension","level":4,"score":0.6450969576835632},{"id":"https://openalex.org/C101762097","wikidata":"https://www.wikidata.org/wiki/Q224093","display_name":"Promoter","level":4,"score":0.5978108048439026},{"id":"https://openalex.org/C41584329","wikidata":"https://www.wikidata.org/wiki/Q175902","display_name":"Sequence database","level":3,"score":0.5668251514434814},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5441144704818726},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.5301918387413025},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.5045527219772339},{"id":"https://openalex.org/C149034497","wikidata":"https://www.wikidata.org/wiki/Q1384835","display_name":"Expressed sequence tag","level":4,"score":0.4671810269355774},{"id":"https://openalex.org/C54985914","wikidata":"https://www.wikidata.org/wiki/Q1295754","display_name":"Consensus sequence","level":4,"score":0.4164705276489258},{"id":"https://openalex.org/C61053724","wikidata":"https://www.wikidata.org/wiki/Q1154615","display_name":"Sequence analysis","level":3,"score":0.41239356994628906},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.3991852402687073},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.3990169167518616},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.33999836444854736},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.30893659591674805},{"id":"https://openalex.org/C187882448","wikidata":"https://www.wikidata.org/wiki/Q283478","display_name":"Complementary DNA","level":3,"score":0.2983083128929138},{"id":"https://openalex.org/C167625842","wikidata":"https://www.wikidata.org/wiki/Q899763","display_name":"Peptide sequence","level":3,"score":0.15843269228935242},{"id":"https://openalex.org/C3017666073","wikidata":"https://www.wikidata.org/wiki/Q1764062","display_name":"Base sequence","level":3,"score":0.1413860321044922},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.12225040793418884}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005057","descriptor_name":"Eukaryotic Cells","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005057","descriptor_name":"Eukaryotic Cells","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005057","descriptor_name":"Eukaryotic Cells","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011401","descriptor_name":"Promoter Regions, Genetic","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011401","descriptor_name":"Promoter Regions, Genetic","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011401","descriptor_name":"Promoter Regions, Genetic","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017931","descriptor_name":"DNA Primers","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D017931","descriptor_name":"DNA Primers","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D017931","descriptor_name":"DNA Primers","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D018076","descriptor_name":"DNA, Complementary","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D018076","descriptor_name":"DNA, Complementary","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D018076","descriptor_name":"DNA, Complementary","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020218","descriptor_name":"Response Elements","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020218","descriptor_name":"Response Elements","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020218","descriptor_name":"Response Elements","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020224","descriptor_name":"Expressed Sequence Tags","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020224","descriptor_name":"Expressed Sequence Tags","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020224","descriptor_name":"Expressed Sequence Tags","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":9,"locations":[{"id":"doi:10.1093/nar/gkh122","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkh122","pdf_url":"https://academic.oup.com/nar/article-pdf/32/suppl_1/D82/7622073/gkh122.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:14681364","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/14681364","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":"Journal Article"},{"id":"pmh:oai:serval.unil.ch:BIB_31432","is_oa":true,"landing_page_url":"https://serval.unil.ch/notice/serval:BIB_31432","pdf_url":null,"source":{"id":"https://openalex.org/S4306401797","display_name":"SERVAL (Universit\u00e9 de Lausanne)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210093590","host_organization_name":"Swiss School of Archaeology in Greece","host_organization_lineage":["https://openalex.org/I4210093590"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research, vol. 32, no. Database issue, pp. D82-D85","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:doc.rero.ch:291248","is_oa":false,"landing_page_url":"http://doc.rero.ch/record/291248/files/gkh122.pdf","pdf_url":"http://doc.rero.ch/record/291248/files/gkh122.pdf","source":{"id":"https://openalex.org/S4306400148","display_name":"reroDoc Digital Library","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":null},{"id":"pmh:oai:iris.unil.ch:iris/122563","is_oa":true,"landing_page_url":"https://iris.unil.ch/handle/iris/122563","pdf_url":"https://iris.unil.ch/bitstreams/73f704e7-0b1c-45d7-840d-cdc0c05fdbb0/download","source":{"id":"https://openalex.org/S7407055444","display_name":"IRIS","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"journal article"},{"id":"pmh:oai:europepmc.org:161281","is_oa":false,"landing_page_url":"http://europepmc.org/pmc/articles/PMC308856","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:308856","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/308856","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.104.5402","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.104.5402","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://nar.oxfordjournals.org/cgi/reprint/32/suppl_1/D82.pdf","raw_type":"text"},{"id":"pmh:oai:infoscience.epfl.ch:114902","is_oa":true,"landing_page_url":"http://infoscience.epfl.ch/record/114902","pdf_url":null,"source":{"id":"https://openalex.org/S4306400487","display_name":"Infoscience (Ecole Polytechnique F\u00e9d\u00e9rale de Lausanne)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I5124864","host_organization_name":"\u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne","host_organization_lineage":["https://openalex.org/I5124864"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkh122","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkh122","pdf_url":"https://academic.oup.com/nar/article-pdf/32/suppl_1/D82/7622073/gkh122.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G8483797511","display_name":null,"funder_award_id":"063933","funder_id":"https://openalex.org/F4320320924","funder_display_name":"Schweizerischer Nationalfonds zur F\u00f6rderung der Wissenschaftlichen Forschung"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320320924","display_name":"Schweizerischer Nationalfonds zur F\u00f6rderung der Wissenschaftlichen Forschung","ror":"https://ror.org/00yjd3n13"}],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2045319488.pdf"},"referenced_works_count":21,"referenced_works":["https://openalex.org/W1730348256","https://openalex.org/W1999966058","https://openalex.org/W2016923471","https://openalex.org/W2045664538","https://openalex.org/W2062233253","https://openalex.org/W2101690350","https://openalex.org/W2106739493","https://openalex.org/W2106932575","https://openalex.org/W2108222684","https://openalex.org/W2110041134","https://openalex.org/W2120761571","https://openalex.org/W2128634905","https://openalex.org/W2136785696","https://openalex.org/W2145366820","https://openalex.org/W2157215359","https://openalex.org/W2159799774","https://openalex.org/W2160073543","https://openalex.org/W2165270659","https://openalex.org/W2169351355","https://openalex.org/W4238471362","https://openalex.org/W4242043490"],"related_works":["https://openalex.org/W2047863810","https://openalex.org/W4293076875","https://openalex.org/W2032539984","https://openalex.org/W4225125190","https://openalex.org/W2753535118","https://openalex.org/W2072834586","https://openalex.org/W2031321300","https://openalex.org/W1972681927","https://openalex.org/W2788919075","https://openalex.org/W2085353593"],"abstract_inverted_index":{"The":[0,33,75],"Eukaryotic":[1],"Promoter":[2],"Database":[3],"(EPD)":[4],"is":[5,64,105],"an":[6,79],"annotated":[7],"non-redundant":[8],"collection":[9],"of":[10,49,78,85,90,114,149],"eukaryotic":[11],"POL":[12],"II":[13],"promoters,":[14],"experimentally":[15],"defined":[16,167],"by":[17,66,172],"a":[18,30,83,108,147],"transcription":[19],"start":[20],"site":[21,93],"(TSS).":[22],"There":[23],"may":[24],"be":[25,180],"multiple":[26],"promoter":[27,62,117,143],"entries":[28,135],"for":[29,54,119,161],"single":[31],"gene.":[32],"underlying":[34],"experimental":[35],"evidence":[36],"comes":[37],"from":[38,43,46],"journal":[39],"articles":[40],"and,":[41],"starting":[42],"release":[44],"73,":[45],"5'":[47],"ESTs":[48],"full-length":[50],"cDNA":[51],"clones":[52],"used":[53],"so-called":[55],"in":[56,71,107,136,168],"silico":[57],"primer":[58],"extension.":[59],"Access":[60],"to":[61,68,97,132,139,146,152,154],"sequences":[63,144],"provided":[65,171],"pointers":[67],"TSS":[69],"positions":[70],"nucleotide":[72],"sequence":[73,121,163],"entries.":[74],"annotation":[76],"part":[77],"EPD":[80,104,134,169,178],"entry":[81],"includes":[82],"description":[84],"the":[86,91,130,173],"type":[87],"and":[88,101,141,151],"source":[89],"initiation":[92],"mapping":[94],"data,":[95],"links":[96],"other":[98],"biological":[99],"databases":[100,156],"bibliographic":[102],"references.":[103],"structured":[106],"way":[109],"that":[110,128],"facilitates":[111],"dynamic":[112],"extraction":[113],"biologically":[115],"meaningful":[116],"subsets":[118],"comparative":[120],"analysis.":[122],"Web-based":[123],"interfaces":[124],"have":[125],"been":[126],"developed":[127],"enable":[129],"user":[131],"view":[133],"different":[137,158],"formats,":[138],"select":[140],"extract":[142],"according":[145],"variety":[148],"criteria":[150],"navigate":[153],"related":[155],"exploiting":[157],"cross-references.":[159],"Tools":[160],"analysing":[162],"motifs":[164],"around":[165],"TSSs":[166],"are":[170],"signal":[174],"search":[175],"analysis":[176],"server.":[177],"can":[179],"accessed":[181],"at":[182],"http://www.epd.":[183],"isb-sib.ch.":[184]},"counts_by_year":[{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":4},{"year":2020,"cited_by_count":1},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":2},{"year":2014,"cited_by_count":3},{"year":2013,"cited_by_count":1},{"year":2012,"cited_by_count":6}],"updated_date":"2026-08-27T14:10:00.468798","created_date":"2025-10-10T00:00:00"}
