{"id":"https://openalex.org/W2149138213","doi":"https://doi.org/10.1093/nar/gkh117","title":"The SUPERFAMILY database in 2004: additions and improvements","display_name":"The SUPERFAMILY database in 2004: additions and improvements","publication_year":2003,"publication_date":"2003-12-17","ids":{"openalex":"https://openalex.org/W2149138213","doi":"https://doi.org/10.1093/nar/gkh117","mag":"2149138213","pmid":"https://pubmed.ncbi.nlm.nih.gov/14681402"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkh117","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkh117","pdf_url":"https://academic.oup.com/nar/article-pdf/32/suppl_1/D235/7622020/gkh117.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/nar/article-pdf/32/suppl_1/D235/7622020/gkh117.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5065747942","display_name":"Martin Madera","orcid":null},"institutions":[{"id":"https://openalex.org/I170203145","display_name":"MRC Laboratory of Molecular Biology","ror":"https://ror.org/00tw3jy02","country_code":"GB","type":"facility","lineage":["https://openalex.org/I170203145","https://openalex.org/I4210087105","https://openalex.org/I90344618"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"M. Madera","raw_affiliation_strings":["MRC Laboratory of Molecular Biology, Hills Road, Cambridge CB2 2QH, UK. mm238@mrc-lmb.cam.ac.uk"],"affiliations":[{"raw_affiliation_string":"MRC Laboratory of Molecular Biology, Hills Road, Cambridge CB2 2QH, UK. mm238@mrc-lmb.cam.ac.uk","institution_ids":["https://openalex.org/I170203145"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5065747942"],"corresponding_institution_ids":["https://openalex.org/I170203145"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":null,"fwci":11.5528,"has_fulltext":false,"cited_by_count":241,"citation_normalized_percentile":{"value":0.99205611,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"32","issue":"90001","first_page":"235D","last_page":"239"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/uniprot","display_name":"UniProt","score":0.810289740562439},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.7569886445999146},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.7072674632072449},{"id":"https://openalex.org/keywords/identifier","display_name":"Identifier","score":0.6514220237731934},{"id":"https://openalex.org/keywords/sequence-database","display_name":"Sequence database","score":0.5804166197776794},{"id":"https://openalex.org/keywords/structural-classification-of-proteins-database","display_name":"Structural Classification of Proteins database","score":0.566591203212738},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.565293550491333},{"id":"https://openalex.org/keywords/sequence-alignment","display_name":"Sequence alignment","score":0.5324355959892273},{"id":"https://openalex.org/keywords/protein-data-bank","display_name":"Protein Data Bank (RCSB PDB)","score":0.5210320949554443},{"id":"https://openalex.org/keywords/ensembl","display_name":"Ensembl","score":0.5018558502197266},{"id":"https://openalex.org/keywords/protein-sequencing","display_name":"Protein sequencing","score":0.45074987411499023},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.37734392285346985},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.37124013900756836},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.22104918956756592},{"id":"https://openalex.org/keywords/protein-structure","display_name":"Protein structure","score":0.21124136447906494},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.17197060585021973},{"id":"https://openalex.org/keywords/peptide-sequence","display_name":"Peptide sequence","score":0.1633317768573761}],"concepts":[{"id":"https://openalex.org/C202264299","wikidata":"https://www.wikidata.org/wiki/Q905695","display_name":"UniProt","level":3,"score":0.810289740562439},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7569886445999146},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.7072674632072449},{"id":"https://openalex.org/C154504017","wikidata":"https://www.wikidata.org/wiki/Q853614","display_name":"Identifier","level":2,"score":0.6514220237731934},{"id":"https://openalex.org/C41584329","wikidata":"https://www.wikidata.org/wiki/Q175902","display_name":"Sequence database","level":3,"score":0.5804166197776794},{"id":"https://openalex.org/C58773245","wikidata":"https://www.wikidata.org/wiki/Q4832556","display_name":"Structural Classification of Proteins database","level":3,"score":0.566591203212738},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.565293550491333},{"id":"https://openalex.org/C45484198","wikidata":"https://www.wikidata.org/wiki/Q827246","display_name":"Sequence alignment","level":4,"score":0.5324355959892273},{"id":"https://openalex.org/C65556437","wikidata":"https://www.wikidata.org/wiki/Q766195","display_name":"Protein Data Bank (RCSB PDB)","level":2,"score":0.5210320949554443},{"id":"https://openalex.org/C141674004","wikidata":"https://www.wikidata.org/wiki/Q1344256","display_name":"Ensembl","level":5,"score":0.5018558502197266},{"id":"https://openalex.org/C10010492","wikidata":"https://www.wikidata.org/wiki/Q3142557","display_name":"Protein sequencing","level":4,"score":0.45074987411499023},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.37734392285346985},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.37124013900756836},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.22104918956756592},{"id":"https://openalex.org/C47701112","wikidata":"https://www.wikidata.org/wiki/Q735188","display_name":"Protein structure","level":2,"score":0.21124136447906494},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.17197060585021973},{"id":"https://openalex.org/C167625842","wikidata":"https://www.wikidata.org/wiki/Q899763","display_name":"Peptide sequence","level":3,"score":0.1633317768573761},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008004","descriptor_name":"Licensure","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008004","descriptor_name":"Licensure","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008004","descriptor_name":"Licensure","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008390","descriptor_name":"Markov Chains","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008390","descriptor_name":"Markov Chains","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008390","descriptor_name":"Markov Chains","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017434","descriptor_name":"Protein Structure, Tertiary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017434","descriptor_name":"Protein Structure, Tertiary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017434","descriptor_name":"Protein Structure, Tertiary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":6,"locations":[{"id":"doi:10.1093/nar/gkh117","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkh117","pdf_url":"https://academic.oup.com/nar/article-pdf/32/suppl_1/D235/7622020/gkh117.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:14681402","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/14681402","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:research-information.bris.ac.uk:openaire_cris_publications/93bb2875-b465-4aa3-847c-99b852ba1252","is_oa":false,"landing_page_url":"https://research-information.bris.ac.uk/en/publications/93bb2875-b465-4aa3-847c-99b852ba1252","pdf_url":null,"source":{"id":"https://openalex.org/S7407055359","display_name":"Explore Bristol Research","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Madera, M, Vogel, C, Kummerfeld, S K, Chothia, C & Gough, J 2004, 'The SUPERFAMILY database in 2004: additions and improvements', Nucleic Acids Research, vol. 32 (10), 235-239. < http://www.cs.bris.ac.uk/Publications/pub_master.jsp?id=1040010 >","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.121.6176","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.121.6176","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://www.cs.bris.ac.uk/~gough/publications/madera_nar_supfam_2004.pdf","raw_type":"text"},{"id":"pmh:oai:europepmc.org:161277","is_oa":false,"landing_page_url":"http://europepmc.org/pmc/articles/PMC308851","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:308851","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/308851","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkh117","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkh117","pdf_url":"https://academic.oup.com/nar/article-pdf/32/suppl_1/D235/7622020/gkh117.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320320966","display_name":"University of Sydney","ror":"https://ror.org/0384j8v12"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2149138213.pdf","grobid_xml":"https://content.openalex.org/works/W2149138213.grobid-xml"},"referenced_works_count":22,"referenced_works":["https://openalex.org/W1513621883","https://openalex.org/W1597538863","https://openalex.org/W1971155547","https://openalex.org/W1989509003","https://openalex.org/W2022366078","https://openalex.org/W2058336694","https://openalex.org/W2085277871","https://openalex.org/W2099075703","https://openalex.org/W2099946731","https://openalex.org/W2108401170","https://openalex.org/W2112792893","https://openalex.org/W2115138247","https://openalex.org/W2119421613","https://openalex.org/W2130479394","https://openalex.org/W2133312664","https://openalex.org/W2140244239","https://openalex.org/W2147667050","https://openalex.org/W2148853951","https://openalex.org/W2151831732","https://openalex.org/W2161303529","https://openalex.org/W2164886928","https://openalex.org/W4246066782"],"related_works":["https://openalex.org/W2087903152","https://openalex.org/W2926533301","https://openalex.org/W2103435205","https://openalex.org/W2161189461","https://openalex.org/W2022667872","https://openalex.org/W2557595285","https://openalex.org/W2914405292","https://openalex.org/W4213149192","https://openalex.org/W2161062388","https://openalex.org/W1972394537"],"abstract_inverted_index":{"The":[0,38],"SUPERFAMILY":[1],"database":[2,22],"provides":[3,191],"structural":[4],"assignments":[5],"to":[6,51,57,67,87,163,171,179],"protein":[7],"sequences":[8],"and":[9,55,79,82,97,109,116,143,169,203,206,212],"a":[10,24,52,153,157],"framework":[11],"for":[12,114,200],"analysis":[13],"of":[14,20,26,35,46,89,100,126,129,176,209],"the":[15,18,21,43,65,77,124,189,192],"results.":[16],"At":[17],"core":[19],"is":[23,40,160],"library":[25,39,66],"profile":[27],"Hidden":[28],"Markov":[29],"Models":[30],"that":[31,175,182],"represent":[32,58],"all":[33,71,90,101,132],"proteins":[34,69,91,145],"known":[36],"structure.":[37],"based":[41],"on":[42,152],"SCOP":[44,53],"classification":[45],"proteins:":[47],"each":[48],"model":[49],"corresponds":[50],"domain":[54],"aims":[56],"an":[59],"entire":[60],"superfamily.":[61],"We":[62],"have":[63,92],"applied":[64],"predicted":[68],"from":[70],"completely":[72,133],"sequenced":[73,134],"genomes":[74,178],"(currently":[75],"154),":[76],"Swiss-Prot":[78],"TrEMBL":[80],"databases":[81],"other":[83,139,177],"sequence":[84,196,204],"collections.":[85],"Close":[86],"60%":[88],"at":[93,119],"least":[94],"one":[95,98],"match,":[96],"half":[99],"residues":[102],"are":[103,112,183],"covered":[104],"by":[105],"assignments.":[106],"All":[107],"models":[108],"full":[110],"results":[111],"available":[113],"download":[115],"online":[117],"browsing":[118],"http://supfam.org.":[120],"Users":[121],"can":[122],"study":[123],"distribution":[125],"their":[127],"superfamily":[128,167],"interest":[130],"across":[131],"genomes,":[135,201],"investigate":[136],"with":[137,174],"which":[138,147],"superfamilies":[140,181,202],"it":[141,148,159,173],"combines":[142],"retrieve":[144],"in":[146],"occurs.":[149],"Alternatively,":[150],"concentrating":[151],"particular":[154],"genome":[155],"as":[156],"whole,":[158],"possible":[161],"first,":[162],"find":[164],"out":[165],"its":[166],"composition,":[168],"secondly,":[170],"compare":[172],"detect":[180],"over-":[184],"or":[185],"under-represented.":[186],"In":[187],"addition,":[188],"webserver":[190],"following":[193],"standard":[194],"services:":[195],"search;":[197],"keyword":[198],"search":[199],"identifiers;":[205],"multiple":[207],"alignment":[208],"genomic,":[210],"PDB":[211],"custom":[213],"sequences.":[214]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":3},{"year":2018,"cited_by_count":7},{"year":2017,"cited_by_count":4},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":5},{"year":2014,"cited_by_count":5},{"year":2013,"cited_by_count":12},{"year":2012,"cited_by_count":8}],"updated_date":"2026-04-05T17:49:38.594831","created_date":"2025-10-10T00:00:00"}
