{"id":"https://openalex.org/W4377290594","doi":"https://doi.org/10.1093/nar/gkad428","title":"Human AGEs: an interactive spatio-temporal visualization and database of human archeogenomics","display_name":"Human AGEs: an interactive spatio-temporal visualization and database of human archeogenomics","publication_year":2023,"publication_date":"2023-05-22","ids":{"openalex":"https://openalex.org/W4377290594","doi":"https://doi.org/10.1093/nar/gkad428","pmid":"https://pubmed.ncbi.nlm.nih.gov/37216609"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkad428","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkad428","pdf_url":"https://academic.oup.com/nar/advance-article-pdf/doi/10.1093/nar/gkad428/50417507/gkad428.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/advance-article-pdf/doi/10.1093/nar/gkad428/50417507/gkad428.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5091997585","display_name":"\u0141ukasz Ciecierski","orcid":"https://orcid.org/0000-0002-3777-8436"},"institutions":[{"id":"https://openalex.org/I4210152414","display_name":"Institute of Bioorganic Chemistry, Polish Academy of Sciences","ror":"https://ror.org/04ejdtr48","country_code":"PL","type":"facility","lineage":["https://openalex.org/I4210152414","https://openalex.org/I99542240"]}],"countries":["PL"],"is_corresponding":false,"raw_author_name":"Lukasz Ciecierski","raw_affiliation_strings":["Institute of Bioorganic Chemistry, Polish Academy of Sciences , Poznan , Poland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Bioorganic Chemistry, Polish Academy of Sciences , Poznan , Poland","institution_ids":["https://openalex.org/I4210152414"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014138396","display_name":"Ireneusz Stolarek","orcid":"https://orcid.org/0000-0002-1100-2138"},"institutions":[{"id":"https://openalex.org/I4210152414","display_name":"Institute of Bioorganic Chemistry, Polish Academy of Sciences","ror":"https://ror.org/04ejdtr48","country_code":"PL","type":"facility","lineage":["https://openalex.org/I4210152414","https://openalex.org/I99542240"]}],"countries":["PL"],"is_corresponding":false,"raw_author_name":"Ireneusz Stolarek","raw_affiliation_strings":["Institute of Bioorganic Chemistry, Polish Academy of Sciences , Poznan , Poland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Bioorganic Chemistry, Polish Academy of Sciences , Poznan , Poland","institution_ids":["https://openalex.org/I4210152414"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5019431640","display_name":"Marek Figlerowicz","orcid":"https://orcid.org/0000-0002-6392-0192"},"institutions":[{"id":"https://openalex.org/I4210152414","display_name":"Institute of Bioorganic Chemistry, Polish Academy of Sciences","ror":"https://ror.org/04ejdtr48","country_code":"PL","type":"facility","lineage":["https://openalex.org/I4210152414","https://openalex.org/I99542240"]}],"countries":["PL"],"is_corresponding":true,"raw_author_name":"Marek Figlerowicz","raw_affiliation_strings":["Institute of Bioorganic Chemistry, Polish Academy of Sciences , Poznan , Poland"],"raw_orcid":"https://orcid.org/0000-0002-6392-0192","affiliations":[{"raw_affiliation_string":"Institute of Bioorganic Chemistry, Polish Academy of Sciences , Poznan , Poland","institution_ids":["https://openalex.org/I4210152414"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5019431640"],"corresponding_institution_ids":["https://openalex.org/I4210152414"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":0.2851,"has_fulltext":true,"cited_by_count":1,"citation_normalized_percentile":{"value":0.68562518,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":91,"max":95},"biblio":{"volume":"51","issue":"W1","first_page":"W269","last_page":"W273"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10751","display_name":"Forensic and Genetic Research","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10751","display_name":"Forensic and Genetic Research","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9975000023841858,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12640","display_name":"Environmental DNA in Biodiversity Studies","score":0.9902999997138977,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.6599023342132568},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.610920786857605},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.4870074391365051},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.48263460397720337},{"id":"https://openalex.org/keywords/ancient-dna","display_name":"Ancient DNA","score":0.4673103988170624},{"id":"https://openalex.org/keywords/cluster-analysis","display_name":"Cluster analysis","score":0.45372796058654785},{"id":"https://openalex.org/keywords/data-visualization","display_name":"Data visualization","score":0.43730270862579346},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.43340808153152466},{"id":"https://openalex.org/keywords/data-integration","display_name":"Data integration","score":0.42544180154800415},{"id":"https://openalex.org/keywords/archaeology","display_name":"Archaeology","score":0.3757910430431366},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.3340548276901245},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.2885354161262512},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.1909058690071106},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.13216283917427063},{"id":"https://openalex.org/keywords/population","display_name":"Population","score":0.12204417586326599},{"id":"https://openalex.org/keywords/geography","display_name":"Geography","score":0.09963753819465637},{"id":"https://openalex.org/keywords/paleontology","display_name":"Paleontology","score":0.09913447499275208}],"concepts":[{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.6599023342132568},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.610920786857605},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4870074391365051},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.48263460397720337},{"id":"https://openalex.org/C189338579","wikidata":"https://www.wikidata.org/wiki/Q290447","display_name":"Ancient DNA","level":3,"score":0.4673103988170624},{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.45372796058654785},{"id":"https://openalex.org/C172367668","wikidata":"https://www.wikidata.org/wiki/Q6504956","display_name":"Data visualization","level":3,"score":0.43730270862579346},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.43340808153152466},{"id":"https://openalex.org/C72634772","wikidata":"https://www.wikidata.org/wiki/Q386824","display_name":"Data integration","level":2,"score":0.42544180154800415},{"id":"https://openalex.org/C166957645","wikidata":"https://www.wikidata.org/wiki/Q23498","display_name":"Archaeology","level":1,"score":0.3757910430431366},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.3340548276901245},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.2885354161262512},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.1909058690071106},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.13216283917427063},{"id":"https://openalex.org/C2908647359","wikidata":"https://www.wikidata.org/wiki/Q2625603","display_name":"Population","level":2,"score":0.12204417586326599},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.09963753819465637},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.09913447499275208},{"id":"https://openalex.org/C144024400","wikidata":"https://www.wikidata.org/wiki/Q21201","display_name":"Sociology","level":0,"score":0.0},{"id":"https://openalex.org/C149923435","wikidata":"https://www.wikidata.org/wiki/Q37732","display_name":"Demography","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000072441","descriptor_name":"DNA, Ancient","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000072441","descriptor_name":"DNA, Ancient","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000072441","descriptor_name":"DNA, Ancient","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000074705","descriptor_name":"Human Genetics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000074705","descriptor_name":"Human Genetics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000074705","descriptor_name":"Human Genetics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/nar/gkad428","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkad428","pdf_url":"https://academic.oup.com/nar/advance-article-pdf/doi/10.1093/nar/gkad428/50417507/gkad428.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:37216609","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/37216609","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:10320146","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10320146","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10320146/pdf/gkad428.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkad428","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkad428","pdf_url":"https://academic.oup.com/nar/advance-article-pdf/doi/10.1093/nar/gkad428/50417507/gkad428.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.5600000023841858,"display_name":"Reduced inequalities","id":"https://metadata.un.org/sdg/10"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320337024","display_name":"Instytut Chemii Bioorganicznej, Polskiej Akademii Nauk","ror":"https://ror.org/04ejdtr48"}],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W4377290594.pdf"},"referenced_works_count":7,"referenced_works":["https://openalex.org/W2050876420","https://openalex.org/W2126488396","https://openalex.org/W2344660378","https://openalex.org/W2807303929","https://openalex.org/W2893635619","https://openalex.org/W2942945938","https://openalex.org/W4296691256"],"related_works":["https://openalex.org/W4225274103","https://openalex.org/W2013728941","https://openalex.org/W2154046714","https://openalex.org/W2579659702","https://openalex.org/W2189613078","https://openalex.org/W1574055964","https://openalex.org/W2923661510","https://openalex.org/W3003759491","https://openalex.org/W2542318691","https://openalex.org/W2547096368"],"abstract_inverted_index":{"Archeogenomics":[0],"is":[1,50],"a":[2,98,126,178,184],"rapidly":[3],"growing":[4],"interdisciplinary":[5],"research":[6],"field":[7],"driven":[8],"by":[9,120],"the":[10,16,37,44,51,79,85,121,134,171],"development":[11],"of":[12,20,36,40,43,53,87,110,136,143],"techniques":[13],"that":[14,67],"enable":[15],"acquisition":[17],"and":[18,58,61,71,113,167,170],"analysis":[19],"ancient":[21],"DNA":[22],"(aDNA).":[23],"Recent":[24],"advances":[25],"in":[26,69,84,145],"aDNA":[27],"studies":[28],"have":[29],"contributed":[30],"significantly":[31],"to":[32,177],"increasing":[33],"our":[34],"understanding":[35],"natural":[38],"history":[39],"humans.":[41],"One":[42],"most":[45],"significant":[46],"challenges":[47],"facing":[48],"archeogenomics":[49],"integration":[52],"highly":[54],"heterogeneous":[55],"genomic,":[56,111],"archeological,":[57],"anthropological":[59],"data":[60,144],"their":[62,194],"comprehensive":[63,107],"analysis,":[64],"considering":[65],"changes":[66],"occur":[68],"time":[70],"space.":[72],"Only":[73],"this":[74],"complex":[75],"approach":[76],"can":[77,117,139,160,174],"explain":[78],"relationship":[80],"between":[81],"past":[82],"populations":[83],"context":[86],"migration":[88],"or":[89,123,155,181],"cultural":[90],"development.":[91],"To":[92],"address":[93],"these":[94],"challenges,":[95],"we":[96],"developed":[97],"Human":[99,137,190],"AGEs":[100,138],"web":[101],"server.":[102],"It":[103],"focuses":[104],"on":[105],"creating":[106],"spatiotemporal":[108],"visualizations":[109,159],"archeogenomic,":[112],"archeological":[114],"information,":[115],"which":[116],"be":[118,161,175],"provided":[119],"user":[122],"loaded":[124],"from":[125],"graph":[127],"database.":[128],"The":[129],"interactive":[130],"map":[131,172],"application":[132],"at":[133,198],"center":[135],"display":[140],"multiple":[141],"layers":[142],"various":[146,164],"forms,":[147],"such":[148],"as":[149,183],"bubble":[150],"charts,":[151,153],"pie":[152],"heatmaps,":[154],"tag":[156],"clouds.":[157],"These":[158],"modified":[162],"using":[163],"clustering,":[165],"filtering,":[166],"styling":[168],"options,":[169],"state":[173],"exported":[176],"high-resolution":[179],"image":[180],"saved":[182],"session":[185],"file":[186],"for":[187],"later":[188],"use.":[189],"AGEs,":[191],"along":[192],"with":[193],"tutorial,":[195],"are":[196],"accessible":[197],"https://archeogenomics.eu/.":[199]},"counts_by_year":[{"year":2025,"cited_by_count":1}],"updated_date":"2026-06-16T07:32:37.131356","created_date":"2025-10-10T00:00:00"}