{"id":"https://openalex.org/W4376871923","doi":"https://doi.org/10.1093/nar/gkad414","title":"nCoVDock2: a docking server to predict the binding modes between COVID-19 targets and its potential ligands","display_name":"nCoVDock2: a docking server to predict the binding modes between COVID-19 targets and its potential ligands","publication_year":2023,"publication_date":"2023-05-17","ids":{"openalex":"https://openalex.org/W4376871923","doi":"https://doi.org/10.1093/nar/gkad414","pmid":"https://pubmed.ncbi.nlm.nih.gov/37194703"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkad414","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkad414","pdf_url":"https://academic.oup.com/nar/advance-article-pdf/doi/10.1093/nar/gkad414/50363515/gkad414.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/advance-article-pdf/doi/10.1093/nar/gkad414/50363515/gkad414.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5112917515","display_name":"Kai Liu","orcid":null},"institutions":[{"id":"https://openalex.org/I4210144214","display_name":"Jiangsu University of Technology","ror":"https://ror.org/04jabhf80","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210144214"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Kai Liu","raw_affiliation_strings":["Institute of Bioinformatics and Medical Engineering, School of Electrical and Information Engineering, Jiangsu University of Technology , Changzhou \u00a0213001, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Bioinformatics and Medical Engineering, School of Electrical and Information Engineering, Jiangsu University of Technology , Changzhou \u00a0213001, China","institution_ids":["https://openalex.org/I4210144214"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070115363","display_name":"Xufeng Lu","orcid":null},"institutions":[{"id":"https://openalex.org/I4210144214","display_name":"Jiangsu University of Technology","ror":"https://ror.org/04jabhf80","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210144214"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xufeng Lu","raw_affiliation_strings":["Institute of Bioinformatics and Medical Engineering, School of Electrical and Information Engineering, Jiangsu University of Technology , Changzhou \u00a0213001, China","Primary Biotechnology Co. , Ltd., Changzhou \u00a0213125, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Bioinformatics and Medical Engineering, School of Electrical and Information Engineering, Jiangsu University of Technology , Changzhou \u00a0213001, China","institution_ids":["https://openalex.org/I4210144214"]},{"raw_affiliation_string":"Primary Biotechnology Co. , Ltd., Changzhou \u00a0213125, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109740365","display_name":"Hang Shi","orcid":null},"institutions":[{"id":"https://openalex.org/I4210144214","display_name":"Jiangsu University of Technology","ror":"https://ror.org/04jabhf80","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210144214"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hang Shi","raw_affiliation_strings":["Institute of Bioinformatics and Medical Engineering, School of Electrical and Information Engineering, Jiangsu University of Technology , Changzhou \u00a0213001, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Bioinformatics and Medical Engineering, School of Electrical and Information Engineering, Jiangsu University of Technology , Changzhou \u00a0213001, China","institution_ids":["https://openalex.org/I4210144214"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5080344709","display_name":"Xiaojun Xu","orcid":"https://orcid.org/0000-0002-6380-698X"},"institutions":[{"id":"https://openalex.org/I4210144214","display_name":"Jiangsu University of Technology","ror":"https://ror.org/04jabhf80","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210144214"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiaojun Xu","raw_affiliation_strings":["Institute of Bioinformatics and Medical Engineering, School of Electrical and Information Engineering, Jiangsu University of Technology , Changzhou \u00a0213001, China"],"raw_orcid":"https://orcid.org/0000-0002-6380-698X","affiliations":[{"raw_affiliation_string":"Institute of Bioinformatics and Medical Engineering, School of Electrical and Information Engineering, Jiangsu University of Technology , Changzhou \u00a0213001, China","institution_ids":["https://openalex.org/I4210144214"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043750371","display_name":"Ren Kong","orcid":"https://orcid.org/0000-0001-9010-1750"},"institutions":[{"id":"https://openalex.org/I4210144214","display_name":"Jiangsu University of Technology","ror":"https://ror.org/04jabhf80","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210144214"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Ren Kong","raw_affiliation_strings":["Institute of Bioinformatics and Medical Engineering, School of Electrical and Information Engineering, Jiangsu University of Technology , Changzhou \u00a0213001, China"],"raw_orcid":"https://orcid.org/0000-0001-9010-1750","affiliations":[{"raw_affiliation_string":"Institute of Bioinformatics and Medical Engineering, School of Electrical and Information Engineering, Jiangsu University of Technology , Changzhou \u00a0213001, China","institution_ids":["https://openalex.org/I4210144214"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5071710594","display_name":"Shan Chang","orcid":"https://orcid.org/0000-0001-7169-9398"},"institutions":[{"id":"https://openalex.org/I4210144214","display_name":"Jiangsu University of Technology","ror":"https://ror.org/04jabhf80","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210144214"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shan Chang","raw_affiliation_strings":["Institute of Bioinformatics and Medical Engineering, School of Electrical and Information Engineering, Jiangsu University of Technology , Changzhou \u00a0213001, China"],"raw_orcid":"https://orcid.org/0000-0001-7169-9398","affiliations":[{"raw_affiliation_string":"Institute of Bioinformatics and Medical Engineering, School of Electrical and Information Engineering, Jiangsu University of Technology , Changzhou \u00a0213001, China","institution_ids":["https://openalex.org/I4210144214"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5043750371"],"corresponding_institution_ids":["https://openalex.org/I4210144214"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":2.0727,"has_fulltext":true,"cited_by_count":12,"citation_normalized_percentile":{"value":0.88885372,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":98},"biblio":{"volume":"51","issue":"W1","first_page":"W365","last_page":"W371"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10118","display_name":"SARS-CoV-2 and COVID-19 Research","score":0.9973999857902527,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":0.9954000115394592,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/docking","display_name":"Docking (animal)","score":0.8369584083557129},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.7143784761428833},{"id":"https://openalex.org/keywords/web-server","display_name":"Web server","score":0.7008877992630005},{"id":"https://openalex.org/keywords/autodock","display_name":"AutoDock","score":0.6983625888824463},{"id":"https://openalex.org/keywords/coronavirus-disease-2019","display_name":"Coronavirus disease 2019 (COVID-19)","score":0.6798081994056702},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5674401521682739},{"id":"https://openalex.org/keywords/severe-acute-respiratory-syndrome-coronavirus-2","display_name":"Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)","score":0.5511995553970337},{"id":"https://openalex.org/keywords/binding-site","display_name":"Binding site","score":0.47213107347488403},{"id":"https://openalex.org/keywords/server","display_name":"Server","score":0.44161468744277954},{"id":"https://openalex.org/keywords/2019-20-coronavirus-outbreak","display_name":"2019-20 coronavirus outbreak","score":0.438955694437027},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.4274671971797943},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.331317663192749},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.32995927333831787},{"id":"https://openalex.org/keywords/virology","display_name":"Virology","score":0.23723715543746948},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.19206875562667847},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.17926561832427979},{"id":"https://openalex.org/keywords/the-internet","display_name":"The Internet","score":0.1713254451751709},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.1413918137550354},{"id":"https://openalex.org/keywords/in-silico","display_name":"In silico","score":0.10804378986358643},{"id":"https://openalex.org/keywords/infectious-disease","display_name":"Infectious disease (medical specialty)","score":0.085629403591156}],"concepts":[{"id":"https://openalex.org/C41685203","wikidata":"https://www.wikidata.org/wiki/Q1974042","display_name":"Docking (animal)","level":2,"score":0.8369584083557129},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7143784761428833},{"id":"https://openalex.org/C11392498","wikidata":"https://www.wikidata.org/wiki/Q11288","display_name":"Web server","level":3,"score":0.7008877992630005},{"id":"https://openalex.org/C2780152424","wikidata":"https://www.wikidata.org/wiki/Q4826062","display_name":"AutoDock","level":4,"score":0.6983625888824463},{"id":"https://openalex.org/C3008058167","wikidata":"https://www.wikidata.org/wiki/Q84263196","display_name":"Coronavirus disease 2019 (COVID-19)","level":4,"score":0.6798081994056702},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5674401521682739},{"id":"https://openalex.org/C3007834351","wikidata":"https://www.wikidata.org/wiki/Q82069695","display_name":"Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)","level":5,"score":0.5511995553970337},{"id":"https://openalex.org/C107824862","wikidata":"https://www.wikidata.org/wiki/Q616005","display_name":"Binding site","level":2,"score":0.47213107347488403},{"id":"https://openalex.org/C93996380","wikidata":"https://www.wikidata.org/wiki/Q44127","display_name":"Server","level":2,"score":0.44161468744277954},{"id":"https://openalex.org/C3006700255","wikidata":"https://www.wikidata.org/wiki/Q81068910","display_name":"2019-20 coronavirus outbreak","level":3,"score":0.438955694437027},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.4274671971797943},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.331317663192749},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.32995927333831787},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.23723715543746948},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.19206875562667847},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.17926561832427979},{"id":"https://openalex.org/C110875604","wikidata":"https://www.wikidata.org/wiki/Q75","display_name":"The Internet","level":2,"score":0.1713254451751709},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.1413918137550354},{"id":"https://openalex.org/C2775905019","wikidata":"https://www.wikidata.org/wiki/Q192572","display_name":"In silico","level":3,"score":0.10804378986358643},{"id":"https://openalex.org/C524204448","wikidata":"https://www.wikidata.org/wiki/Q788926","display_name":"Infectious disease (medical specialty)","level":3,"score":0.085629403591156},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.0},{"id":"https://openalex.org/C159110408","wikidata":"https://www.wikidata.org/wiki/Q121176","display_name":"Nursing","level":1,"score":0.0},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.0},{"id":"https://openalex.org/C116675565","wikidata":"https://www.wikidata.org/wiki/Q3241045","display_name":"Outbreak","level":2,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D000906","descriptor_name":"Antibodies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000906","descriptor_name":"Antibodies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000906","descriptor_name":"Antibodies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008024","descriptor_name":"Ligands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008024","descriptor_name":"Ligands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008024","descriptor_name":"Ligands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D062105","descriptor_name":"Molecular Docking Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D062105","descriptor_name":"Molecular Docking Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D062105","descriptor_name":"Molecular Docking Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/nar/gkad414","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkad414","pdf_url":"https://academic.oup.com/nar/advance-article-pdf/doi/10.1093/nar/gkad414/50363515/gkad414.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:37194703","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/37194703","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:10320176","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10320176","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10320176/pdf/gkad414.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkad414","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkad414","pdf_url":"https://academic.oup.com/nar/advance-article-pdf/doi/10.1093/nar/gkad414/50363515/gkad414.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being","score":0.6499999761581421}],"awards":[{"id":"https://openalex.org/G2220757840","display_name":"RNA\u7ed3\u6784\u62d3\u6251\u53ca\u57fa\u4e8e\u7ed3\u6784\u62d3\u6251\u7684\u4e09\u7ea7\u7ed3\u6784\u9884\u6d4b\u7814\u7a76","funder_award_id":"12074151","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320309568","display_name":"University of Missouri","ror":"https://ror.org/02ymw8z06"},{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320321410","display_name":"Jiangsu University","ror":"https://ror.org/03jc41j30"},{"id":"https://openalex.org/F4320327507","display_name":"Jiangsu University of Technology","ror":null}],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W4376871923.pdf"},"referenced_works_count":33,"referenced_works":["https://openalex.org/W2134967712","https://openalex.org/W2521525223","https://openalex.org/W2608559058","https://openalex.org/W2765322245","https://openalex.org/W2954483845","https://openalex.org/W2967672482","https://openalex.org/W3003217347","https://openalex.org/W3004318991","https://openalex.org/W3006973065","https://openalex.org/W3008827533","https://openalex.org/W3016304978","https://openalex.org/W3045143182","https://openalex.org/W3048079539","https://openalex.org/W3048446898","https://openalex.org/W3048620154","https://openalex.org/W3091122177","https://openalex.org/W3122066254","https://openalex.org/W3135726897","https://openalex.org/W3154018702","https://openalex.org/W3159333387","https://openalex.org/W3168436232","https://openalex.org/W3195593976","https://openalex.org/W3199379397","https://openalex.org/W3201739723","https://openalex.org/W3207537951","https://openalex.org/W3215729782","https://openalex.org/W4200051875","https://openalex.org/W4225094838","https://openalex.org/W4225112745","https://openalex.org/W4225286967","https://openalex.org/W4225338642","https://openalex.org/W4229045071","https://openalex.org/W4322719792"],"related_works":["https://openalex.org/W2058674645","https://openalex.org/W1594539819","https://openalex.org/W2766845742","https://openalex.org/W2007257620","https://openalex.org/W2130867670","https://openalex.org/W4213038553","https://openalex.org/W1984029386","https://openalex.org/W4312202637","https://openalex.org/W2136513242","https://openalex.org/W2336040088"],"abstract_inverted_index":{"The":[0,45,148],"rapid":[1],"emergence":[2],"of":[3,18,24,36,48,102],"SARS-CoV-2":[4,30],"variants":[5],"with":[6,93,152],"multi-sites":[7],"mutations":[8],"is":[9],"considered":[10],"as":[11],"a":[12,42,68,123,144],"major":[13],"obstacle":[14],"for":[15,29,77,105,109,129,143],"the":[16,25,34,37,74,82,90,106,118,135],"development":[17],"drugs":[19],"and":[20,57,59,97,122,138,156],"vaccines.":[21],"Although":[22],"most":[23],"functional":[26],"proteins":[27],"essential":[28],"have":[31],"been":[32],"determined,":[33],"understanding":[35],"COVID-19":[38,50],"target-ligand":[39],"interactions":[40],"remains":[41],"key":[43],"challenge.":[44],"old":[46],"version":[47,120],"this":[49],"docking":[51,70],"server":[52,71,84],"was":[53,115,127],"built":[54],"in":[55],"2020,":[56],"free":[58],"open":[60],"to":[61,72,117],"all":[62],"users.":[63],"Here,":[64],"we":[65],"present":[66],"nCoVDock2,":[67],"new":[69,83,124],"predict":[73],"binding":[75],"modes":[76],"targets":[78,101],"from":[79],"SARS-CoV-2.":[80],"First,":[81],"supports":[85],"more":[86,99],"targets.":[87],"We":[88],"replaced":[89],"modeled":[91],"structures":[92,96],"newly":[94],"resolved":[95],"added":[98,128],"potential":[100],"COVID-19,":[103],"especially":[104],"variants.":[107],"Second,":[108],"small":[110],"molecule":[111],"docking,":[112],"Autodock":[113],"Vina":[114],"upgraded":[116],"latest":[119],"1.2.0,":[121],"scoring":[125],"function":[126],"peptide":[130],"or":[131],"antibody":[132],"docking.":[133],"Third,":[134],"input":[136],"interface":[137],"molecular":[139],"visualization":[140],"were":[141],"updated":[142],"better":[145],"user":[146],"experience.":[147],"web":[149],"server,":[150],"together":[151],"an":[153],"extensive":[154],"help":[155],"tutorial,":[157],"are":[158],"freely":[159],"available":[160],"at:":[161],"https://ncovdock2.schanglab.org.cn.":[162]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":4},{"year":2024,"cited_by_count":4},{"year":2023,"cited_by_count":2}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}