{"id":"https://openalex.org/W4307468144","doi":"https://doi.org/10.1093/nar/gkac899","title":"The new uORFdb: integrating literature, sequence, and variation data in a central hub for uORF research","display_name":"The new uORFdb: integrating literature, sequence, and variation data in a central hub for uORF research","publication_year":2022,"publication_date":"2022-10-28","ids":{"openalex":"https://openalex.org/W4307468144","doi":"https://doi.org/10.1093/nar/gkac899","pmid":"https://pubmed.ncbi.nlm.nih.gov/36305828"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkac899","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkac899","pdf_url":"https://academic.oup.com/nar/article-pdf/51/D1/D328/48441537/gkac899.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","datacite","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/51/D1/D328/48441537/gkac899.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5033713371","display_name":"Felix Manske","orcid":"https://orcid.org/0000-0001-6509-2063"},"institutions":[{"id":"https://openalex.org/I22465464","display_name":"University of M\u00fcnster","ror":"https://ror.org/00pd74e08","country_code":"DE","type":"education","lineage":["https://openalex.org/I22465464"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Felix Manske","raw_affiliation_strings":["Institute of Bioinformatics, University of M\u00fcnster , M\u00fcnster \u00a048149, Germany"],"raw_orcid":"https://orcid.org/0000-0001-6509-2063","affiliations":[{"raw_affiliation_string":"Institute of Bioinformatics, University of M\u00fcnster , M\u00fcnster \u00a048149, Germany","institution_ids":["https://openalex.org/I22465464"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027562667","display_name":"Lynn Ogoniak","orcid":"https://orcid.org/0000-0002-2739-0251"},"institutions":[{"id":"https://openalex.org/I22465464","display_name":"University of M\u00fcnster","ror":"https://ror.org/00pd74e08","country_code":"DE","type":"education","lineage":["https://openalex.org/I22465464"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Lynn Ogoniak","raw_affiliation_strings":["Institute of Bioinformatics, University of M\u00fcnster , M\u00fcnster \u00a048149, Germany"],"raw_orcid":"https://orcid.org/0000-0002-2739-0251","affiliations":[{"raw_affiliation_string":"Institute of Bioinformatics, University of M\u00fcnster , M\u00fcnster \u00a048149, Germany","institution_ids":["https://openalex.org/I22465464"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5052263590","display_name":"Lara J\u00fcrgens","orcid":"https://orcid.org/0000-0001-6910-8341"},"institutions":[{"id":"https://openalex.org/I4210103666","display_name":"University Hospital M\u00fcnster","ror":"https://ror.org/01856cw59","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I4210103666"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Lara J\u00fcrgens","raw_affiliation_strings":["Department of Medicine A, Hematology, Oncology, Hemostaseology and Pneumology, University Hospital M\u00fcnster , M\u00fcnster \u00a048149, Germany"],"raw_orcid":"https://orcid.org/0000-0001-6910-8341","affiliations":[{"raw_affiliation_string":"Department of Medicine A, Hematology, Oncology, Hemostaseology and Pneumology, University Hospital M\u00fcnster , M\u00fcnster \u00a048149, Germany","institution_ids":["https://openalex.org/I4210103666"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5090098771","display_name":"Norbert Grundmann","orcid":"https://orcid.org/0000-0001-8743-2348"},"institutions":[{"id":"https://openalex.org/I22465464","display_name":"University of M\u00fcnster","ror":"https://ror.org/00pd74e08","country_code":"DE","type":"education","lineage":["https://openalex.org/I22465464"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Norbert Grundmann","raw_affiliation_strings":["Institute of Bioinformatics, University of M\u00fcnster , M\u00fcnster \u00a048149, Germany"],"raw_orcid":"https://orcid.org/0000-0001-8743-2348","affiliations":[{"raw_affiliation_string":"Institute of Bioinformatics, University of M\u00fcnster , M\u00fcnster \u00a048149, Germany","institution_ids":["https://openalex.org/I22465464"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056827383","display_name":"Wojciech Maka\u0142owski","orcid":"https://orcid.org/0000-0003-2303-9541"},"institutions":[{"id":"https://openalex.org/I22465464","display_name":"University of M\u00fcnster","ror":"https://ror.org/00pd74e08","country_code":"DE","type":"education","lineage":["https://openalex.org/I22465464"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Wojciech Maka\u0142owski","raw_affiliation_strings":["Institute of Bioinformatics, University of M\u00fcnster , M\u00fcnster \u00a048149, Germany"],"raw_orcid":"https://orcid.org/0000-0003-2303-9541","affiliations":[{"raw_affiliation_string":"Institute of Bioinformatics, University of M\u00fcnster , M\u00fcnster \u00a048149, Germany","institution_ids":["https://openalex.org/I22465464"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5058555645","display_name":"Klaus Wethmar","orcid":"https://orcid.org/0000-0002-1899-3261"},"institutions":[{"id":"https://openalex.org/I4210103666","display_name":"University Hospital M\u00fcnster","ror":"https://ror.org/01856cw59","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I4210103666"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Klaus Wethmar","raw_affiliation_strings":["Department of Medicine A, Hematology, Oncology, Hemostaseology and Pneumology, University Hospital M\u00fcnster , M\u00fcnster \u00a048149, Germany"],"raw_orcid":"https://orcid.org/0000-0002-1899-3261","affiliations":[{"raw_affiliation_string":"Department of Medicine A, Hematology, Oncology, Hemostaseology and Pneumology, University Hospital M\u00fcnster , M\u00fcnster \u00a048149, Germany","institution_ids":["https://openalex.org/I4210103666"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5056827383","https://openalex.org/A5058555645"],"corresponding_institution_ids":["https://openalex.org/I22465464","https://openalex.org/I4210103666"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":4025,"currency":"EUR","value_usd":4340},"fwci":2.6665,"has_fulltext":true,"cited_by_count":37,"citation_normalized_percentile":{"value":0.91558602,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":100},"biblio":{"volume":"51","issue":"D1","first_page":"D328","last_page":"D336"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.8234684467315674},{"id":"https://openalex.org/keywords/upstream-open-reading-frame","display_name":"Upstream open reading frame","score":0.6505353450775146},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.5476471781730652},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5358656048774719},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.5316515564918518},{"id":"https://openalex.org/keywords/open-reading-frame","display_name":"Open reading frame","score":0.527665913105011},{"id":"https://openalex.org/keywords/whole-genome-sequencing","display_name":"Whole genome sequencing","score":0.47701048851013184},{"id":"https://openalex.org/keywords/coding-region","display_name":"Coding region","score":0.41131913661956787},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.1896129548549652},{"id":"https://openalex.org/keywords/peptide-sequence","display_name":"Peptide sequence","score":0.17278707027435303}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8234684467315674},{"id":"https://openalex.org/C166258313","wikidata":"https://www.wikidata.org/wiki/Q7899328","display_name":"Upstream open reading frame","level":5,"score":0.6505353450775146},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.5476471781730652},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5358656048774719},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.5316515564918518},{"id":"https://openalex.org/C47289529","wikidata":"https://www.wikidata.org/wiki/Q908550","display_name":"Open reading frame","level":4,"score":0.527665913105011},{"id":"https://openalex.org/C24432333","wikidata":"https://www.wikidata.org/wiki/Q2068526","display_name":"Whole genome sequencing","level":4,"score":0.47701048851013184},{"id":"https://openalex.org/C91779695","wikidata":"https://www.wikidata.org/wiki/Q3780824","display_name":"Coding region","level":3,"score":0.41131913661956787},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.1896129548549652},{"id":"https://openalex.org/C167625842","wikidata":"https://www.wikidata.org/wiki/Q899763","display_name":"Peptide sequence","level":3,"score":0.17278707027435303}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014176","descriptor_name":"Protein Biosynthesis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014176","descriptor_name":"Protein Biosynthesis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014176","descriptor_name":"Protein Biosynthesis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016366","descriptor_name":"Open Reading Frames","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D016366","descriptor_name":"Open Reading Frames","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D016366","descriptor_name":"Open Reading Frames","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D018387","descriptor_name":"Codon, Initiator","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018387","descriptor_name":"Codon, Initiator","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018387","descriptor_name":"Codon, Initiator","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020121","descriptor_name":"5' Untranslated Regions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020121","descriptor_name":"5' Untranslated Regions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020121","descriptor_name":"5' Untranslated Regions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D056890","descriptor_name":"Eukaryota","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D056890","descriptor_name":"Eukaryota","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D056890","descriptor_name":"Eukaryota","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1093/nar/gkac899","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkac899","pdf_url":"https://academic.oup.com/nar/article-pdf/51/D1/D328/48441537/gkac899.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:36305828","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/36305828","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:9825577","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/9825577","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"},{"id":"pmh:oai:wwu.de:d473c387-ee90-4096-899a-6fcd615d9ffb","is_oa":true,"landing_page_url":"https://nbn-resolving.org/urn:nbn:de:hbz:6-18938557952","pdf_url":"https://repositorium.uni-muenster.de/document/miami/d473c387-ee90-4096-899a-6fcd615d9ffb/10.1093_nar_gkac899.pdf","source":{"id":"https://openalex.org/S4306402051","display_name":"URN:NBN Resolver for Germany & Switzerland (German National Library)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I2802635041","host_organization_name":"Technische Informationsbibliothek (TIB)","host_organization_lineage":["https://openalex.org/I2802635041"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/article"},{"id":"doi:10.17879/18938559185","is_oa":true,"landing_page_url":"https://doi.org/10.17879/18938559185","pdf_url":null,"source":{"id":"https://openalex.org/S7407053005","display_name":"Universit\u00e4ts- und Landesbibliothek M\u00fcnster","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"article-journal"}],"best_oa_location":{"id":"doi:10.1093/nar/gkac899","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkac899","pdf_url":"https://academic.oup.com/nar/article-pdf/51/D1/D328/48441537/gkac899.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/4","display_name":"Quality Education","score":0.8100000023841858}],"awards":[{"id":"https://openalex.org/G1477424166","display_name":null,"funder_award_id":"70113632","funder_id":"https://openalex.org/F4320323556","funder_display_name":"Deutsche Krebshilfe"}],"funders":[{"id":"https://openalex.org/F4320322957","display_name":"Westf\u00e4lische Wilhelms-Universit\u00e4t M\u00fcnster","ror":"https://ror.org/00pd74e08"},{"id":"https://openalex.org/F4320323556","display_name":"Deutsche Krebshilfe","ror":"https://ror.org/01wxdd722"}],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4307468144.pdf"},"referenced_works_count":66,"referenced_works":["https://openalex.org/W251973328","https://openalex.org/W1493205734","https://openalex.org/W1551420438","https://openalex.org/W1608415194","https://openalex.org/W1899601083","https://openalex.org/W1967812314","https://openalex.org/W1980438612","https://openalex.org/W1982980697","https://openalex.org/W1984426737","https://openalex.org/W2015803078","https://openalex.org/W2020828649","https://openalex.org/W2024144538","https://openalex.org/W2040415319","https://openalex.org/W2048551040","https://openalex.org/W2066825851","https://openalex.org/W2067678127","https://openalex.org/W2072877087","https://openalex.org/W2080277707","https://openalex.org/W2083070222","https://openalex.org/W2096525273","https://openalex.org/W2097409962","https://openalex.org/W2099390806","https://openalex.org/W2108871359","https://openalex.org/W2116654909","https://openalex.org/W2119010032","https://openalex.org/W2119180969","https://openalex.org/W2128016314","https://openalex.org/W2143688500","https://openalex.org/W2152974197","https://openalex.org/W2154128645","https://openalex.org/W2168138973","https://openalex.org/W2168847939","https://openalex.org/W2173732482","https://openalex.org/W2256016639","https://openalex.org/W2521492299","https://openalex.org/W2527824902","https://openalex.org/W2770089238","https://openalex.org/W2801535989","https://openalex.org/W2889990268","https://openalex.org/W2891974017","https://openalex.org/W2923862975","https://openalex.org/W2983644345","https://openalex.org/W2990871782","https://openalex.org/W3012079654","https://openalex.org/W3012319475","https://openalex.org/W3029661147","https://openalex.org/W3032045451","https://openalex.org/W3036877448","https://openalex.org/W3102488048","https://openalex.org/W3126160703","https://openalex.org/W3133237182","https://openalex.org/W3135537831","https://openalex.org/W3152807587","https://openalex.org/W3165123731","https://openalex.org/W3199765866","https://openalex.org/W3202941569","https://openalex.org/W3208459100","https://openalex.org/W4200553915","https://openalex.org/W4205440119","https://openalex.org/W4206027885","https://openalex.org/W4214871431","https://openalex.org/W4224215762","https://openalex.org/W4226051960","https://openalex.org/W4289274885","https://openalex.org/W6639727365","https://openalex.org/W6675042756"],"related_works":["https://openalex.org/W2088987774","https://openalex.org/W2027675659","https://openalex.org/W1752438730","https://openalex.org/W1978500689","https://openalex.org/W1997172447","https://openalex.org/W3031046715","https://openalex.org/W2145292712","https://openalex.org/W2170068542","https://openalex.org/W2791392526","https://openalex.org/W1974337044"],"abstract_inverted_index":{"Upstream":[0],"open":[1],"reading":[2],"frames":[3],"(uORFs)":[4],"are":[5,30],"initiated":[6],"by":[7,192],"AUG":[8],"or":[9],"near-cognate":[10],"start":[11],"codons":[12],"and":[13,42,81,112,142,156],"have":[14,56],"been":[15,57],"identified":[16],"in":[17,32,53,76,131,140],"the":[18,23,37,60,71,147,193],"transcript":[19],"leader":[20],"sequences":[21,55],"of":[22,25,36,48,62,74,85,95,127,152,170,187],"majority":[24],"eukaryotic":[26],"transcripts.":[27],"Functionally,":[28],"uORFs":[29,130,136],"implicated":[31],"downstream":[33],"translational":[34,148],"regulation":[35],"main":[38],"protein":[39],"coding":[40],"sequence":[41,108,125],"may":[43],"serve":[44],"as":[45],"a":[46,79],"source":[47],"non-canonical":[49],"peptides.":[50],"Genetic":[51],"defects":[52],"uORF":[54],"linked":[58],"to":[59,105,145,158],"development":[61],"various":[63],"diseases,":[64],"including":[65],"cancer.":[66],"To":[67],"simplify":[68],"uORF-related":[69,86,177],"research,":[70],"initial":[72],"release":[73],"uORFdb":[75,102],"2014":[77],"provided":[78],"comprehensive":[80],"manually":[82],"curated":[83],"collection":[84],"literature.":[87],"Here,":[88],"we":[89],"present":[90],"an":[91],"updated":[92],"sequence-based":[93],"version":[94],"uORFdb,":[96],"accessible":[97],"at":[98],"https://www.bioinformatics.uni-muenster.de/tools/uorfdb.":[99],"The":[100,173],"new":[101],"enables":[103],"users":[104],"directly":[106],"access":[107],"information,":[109,155],"graphical":[110],"displays,":[111],"genetic":[113],"variation":[114,179],"data":[115,126,180],"for":[116],"over":[117],"2.4":[118],"million":[119,129],"human":[120],"uORFs.":[121,172],"It":[122],"also":[123,175],"includes":[124],">4.2":[128],"12":[132],"additional":[133],"species.":[134],"Multiple":[135],"can":[137],"be":[138],"displayed":[139],"transcript-":[141],"reading-frame-specific":[143],"models":[144],"visualize":[146],"context.":[149],"A":[150],"variety":[151],"filters,":[153],"sequence-related":[154],"links":[157],"external":[159],"resources":[160],"(UCSC":[161],"Genome":[162],"Browser,":[163],"dbSNP,":[164],"ClinVar)":[165],"facilitate":[166],"immediate":[167],"in-depth":[168],"analysis":[169],"individual":[171],"database":[174],"contains":[176],"somatic":[178],"obtained":[181],"from":[182],"whole-genome":[183],"sequencing":[184],"(WGS)":[185],"analyses":[186],"677":[188],"cancer":[189],"samples":[190],"collected":[191],"TCGA":[194],"consortium.":[195]},"counts_by_year":[{"year":2026,"cited_by_count":3},{"year":2025,"cited_by_count":9},{"year":2024,"cited_by_count":18},{"year":2023,"cited_by_count":6},{"year":2022,"cited_by_count":1}],"updated_date":"2026-08-01T09:00:35.917206","created_date":"2025-10-10T00:00:00"}
