{"id":"https://openalex.org/W4302304569","doi":"https://doi.org/10.1093/nar/gkac862","title":"ChemPert: mapping between chemical perturbation and transcriptional response for non-cancer cells","display_name":"ChemPert: mapping between chemical perturbation and transcriptional response for non-cancer cells","publication_year":2022,"publication_date":"2022-09-25","ids":{"openalex":"https://openalex.org/W4302304569","doi":"https://doi.org/10.1093/nar/gkac862","pmid":"https://pubmed.ncbi.nlm.nih.gov/36200827"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkac862","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkac862","pdf_url":"https://academic.oup.com/nar/article-pdf/51/D1/D877/48441554/gkac862.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/51/D1/D877/48441554/gkac862.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5091452224","display_name":"Menglin Zheng","orcid":"https://orcid.org/0000-0003-2102-2711"},"institutions":[{"id":"https://openalex.org/I186903577","display_name":"University of Luxembourg","ror":"https://ror.org/036x5ad56","country_code":"LU","type":"education","lineage":["https://openalex.org/I186903577"]}],"countries":["LU"],"is_corresponding":false,"raw_author_name":"Menglin Zheng","raw_affiliation_strings":["Luxembourg Centre for Systems Biomedicine (LCSB), University of Luxembourg , 6 Avenue du Swing, Esch-sur-Alzette, L-4367 Belvaux, Luxembourg"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Luxembourg Centre for Systems Biomedicine (LCSB), University of Luxembourg , 6 Avenue du Swing, Esch-sur-Alzette, L-4367 Belvaux, Luxembourg","institution_ids":["https://openalex.org/I186903577"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036136107","display_name":"Satoshi Okawa","orcid":"https://orcid.org/0000-0003-3916-3109"},"institutions":[{"id":"https://openalex.org/I186903577","display_name":"University of Luxembourg","ror":"https://ror.org/036x5ad56","country_code":"LU","type":"education","lineage":["https://openalex.org/I186903577"]}],"countries":["LU"],"is_corresponding":false,"raw_author_name":"Satoshi Okawa","raw_affiliation_strings":["Luxembourg Centre for Systems Biomedicine (LCSB), University of Luxembourg , 6 Avenue du Swing, Esch-sur-Alzette, L-4367 Belvaux, Luxembourg"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Luxembourg Centre for Systems Biomedicine (LCSB), University of Luxembourg , 6 Avenue du Swing, Esch-sur-Alzette, L-4367 Belvaux, Luxembourg","institution_ids":["https://openalex.org/I186903577"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056366119","display_name":"Miren Bravo","orcid":"https://orcid.org/0000-0001-5889-9125"},"institutions":[{"id":"https://openalex.org/I4210112728","display_name":"CIC bioGUNE","ror":"https://ror.org/02x5c5y60","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210112728"]},{"id":"https://openalex.org/I4210132431","display_name":"Centro de Investigaci\u00f3n Biom\u00e9dica en Red de Enfermedades Hep\u00e1ticas y Digestivas","ror":"https://ror.org/03cn6tr16","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210132431"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Miren Bravo","raw_affiliation_strings":["Centro de Investigaci\u00f3n Biom\u00e9dica en Red de Enfermedades Hep\u00e1ticas y Digestivas (CIBERehd) , 48160\u00a0Bizkaia, Spain","Liver Disease Laboratory, Center for Cooperative Research in Biosciences (CIC bioGUNE), Basque Research and Technology Alliance (BRTA), Bizkaia Technology Park , Derio, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centro de Investigaci\u00f3n Biom\u00e9dica en Red de Enfermedades Hep\u00e1ticas y Digestivas (CIBERehd) , 48160\u00a0Bizkaia, Spain","institution_ids":["https://openalex.org/I4210132431"]},{"raw_affiliation_string":"Liver Disease Laboratory, Center for Cooperative Research in Biosciences (CIC bioGUNE), Basque Research and Technology Alliance (BRTA), Bizkaia Technology Park , Derio, Spain","institution_ids":["https://openalex.org/I4210112728"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100405446","display_name":"Fei Chen","orcid":"https://orcid.org/0009-0005-5378-7606"},"institutions":[{"id":"https://openalex.org/I33256026","display_name":"German Research Centre for Artificial Intelligence","ror":"https://ror.org/01ayc5b57","country_code":"DE","type":"funder","lineage":["https://openalex.org/I33256026"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Fei Chen","raw_affiliation_strings":["German Research Center for Artificial Intelligence (DFKI) , 66123\u00a0Saarbr\u00fccken, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"German Research Center for Artificial Intelligence (DFKI) , 66123\u00a0Saarbr\u00fccken, Germany","institution_ids":["https://openalex.org/I33256026"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074181141","display_name":"Maria Luz Mart\u00ednez\u2010Chantar","orcid":"https://orcid.org/0000-0002-6446-9911"},"institutions":[{"id":"https://openalex.org/I4210112728","display_name":"CIC bioGUNE","ror":"https://ror.org/02x5c5y60","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210112728"]},{"id":"https://openalex.org/I4210132431","display_name":"Centro de Investigaci\u00f3n Biom\u00e9dica en Red de Enfermedades Hep\u00e1ticas y Digestivas","ror":"https://ror.org/03cn6tr16","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210132431"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Mar\u00eda-Luz Mart\u00ednez-Chantar","raw_affiliation_strings":["Centro de Investigaci\u00f3n Biom\u00e9dica en Red de Enfermedades Hep\u00e1ticas y Digestivas (CIBERehd) , 48160\u00a0Bizkaia, Spain","Liver Disease Laboratory, Center for Cooperative Research in Biosciences (CIC bioGUNE), Basque Research and Technology Alliance (BRTA), Bizkaia Technology Park , Derio, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centro de Investigaci\u00f3n Biom\u00e9dica en Red de Enfermedades Hep\u00e1ticas y Digestivas (CIBERehd) , 48160\u00a0Bizkaia, Spain","institution_ids":["https://openalex.org/I4210132431"]},{"raw_affiliation_string":"Liver Disease Laboratory, Center for Cooperative Research in Biosciences (CIC bioGUNE), Basque Research and Technology Alliance (BRTA), Bizkaia Technology Park , Derio, Spain","institution_ids":["https://openalex.org/I4210112728"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5075664103","display_name":"Antonio del Sol","orcid":"https://orcid.org/0000-0002-9926-617X"},"institutions":[{"id":"https://openalex.org/I110594554","display_name":"Ikerbasque","ror":"https://ror.org/01cc3fy72","country_code":"ES","type":"other","lineage":["https://openalex.org/I110594554"]},{"id":"https://openalex.org/I186903577","display_name":"University of Luxembourg","ror":"https://ror.org/036x5ad56","country_code":"LU","type":"education","lineage":["https://openalex.org/I186903577"]},{"id":"https://openalex.org/I4210112728","display_name":"CIC bioGUNE","ror":"https://ror.org/02x5c5y60","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210112728"]}],"countries":["ES","LU"],"is_corresponding":true,"raw_author_name":"Antonio del\u00a0Sol","raw_affiliation_strings":["DCIC bioGUNE-BRTA (Basque Research and Technology Alliance), Bizkaia Technology Park , 801 Building, 48160 Derio, Spain","IKERBASQUE, Basque Foundation for Science , Bilbao 48013, Spain","Luxembourg Centre for Systems Biomedicine (LCSB), University of Luxembourg , 6 Avenue du Swing, Esch-sur-Alzette, L-4367 Belvaux, Luxembourg"],"raw_orcid":"https://orcid.org/0000-0002-9926-617X","affiliations":[{"raw_affiliation_string":"DCIC bioGUNE-BRTA (Basque Research and Technology Alliance), Bizkaia Technology Park , 801 Building, 48160 Derio, Spain","institution_ids":["https://openalex.org/I4210112728"]},{"raw_affiliation_string":"IKERBASQUE, Basque Foundation for Science , Bilbao 48013, Spain","institution_ids":["https://openalex.org/I110594554"]},{"raw_affiliation_string":"Luxembourg Centre for Systems Biomedicine (LCSB), University of Luxembourg , 6 Avenue du Swing, Esch-sur-Alzette, L-4367 Belvaux, Luxembourg","institution_ids":["https://openalex.org/I186903577"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5075664103"],"corresponding_institution_ids":["https://openalex.org/I110594554","https://openalex.org/I186903577","https://openalex.org/I4210112728"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":1.5661,"has_fulltext":true,"cited_by_count":24,"citation_normalized_percentile":{"value":0.8324332,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":98,"max":99},"biblio":{"volume":"51","issue":"D1","first_page":"D877","last_page":"D889"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10604","display_name":"RNA Research and Splicing","score":0.9980000257492065,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10604","display_name":"RNA Research and Splicing","score":0.9980000257492065,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9943000078201294,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11668","display_name":"interferon and immune responses","score":0.9943000078201294,"subfield":{"id":"https://openalex.org/subfields/2403","display_name":"Immunology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.6604869961738586},{"id":"https://openalex.org/keywords/cancer-cell","display_name":"Cancer cell","score":0.6109994053840637},{"id":"https://openalex.org/keywords/in-silico","display_name":"In silico","score":0.5859484672546387},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5505039691925049},{"id":"https://openalex.org/keywords/inference","display_name":"Inference","score":0.48674488067626953},{"id":"https://openalex.org/keywords/cancer","display_name":"Cancer","score":0.47819948196411133},{"id":"https://openalex.org/keywords/cancer-drugs","display_name":"Cancer drugs","score":0.46060022711753845},{"id":"https://openalex.org/keywords/transcriptome","display_name":"Transcriptome","score":0.4446295499801636},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.4143815040588379},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3363412618637085},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.17270353436470032},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.17112529277801514},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.12960374355316162},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.10969579219818115}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.6604869961738586},{"id":"https://openalex.org/C96232424","wikidata":"https://www.wikidata.org/wiki/Q4118072","display_name":"Cancer cell","level":3,"score":0.6109994053840637},{"id":"https://openalex.org/C2775905019","wikidata":"https://www.wikidata.org/wiki/Q192572","display_name":"In silico","level":3,"score":0.5859484672546387},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5505039691925049},{"id":"https://openalex.org/C2776214188","wikidata":"https://www.wikidata.org/wiki/Q408386","display_name":"Inference","level":2,"score":0.48674488067626953},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.47819948196411133},{"id":"https://openalex.org/C3020340455","wikidata":"https://www.wikidata.org/wiki/Q974135","display_name":"Cancer drugs","level":3,"score":0.46060022711753845},{"id":"https://openalex.org/C162317418","wikidata":"https://www.wikidata.org/wiki/Q252857","display_name":"Transcriptome","level":4,"score":0.4446295499801636},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.4143815040588379},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3363412618637085},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.17270353436470032},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.17112529277801514},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.12960374355316162},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.10969579219818115}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008024","descriptor_name":"Ligands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008024","descriptor_name":"Ligands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008024","descriptor_name":"Ligands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/nar/gkac862","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkac862","pdf_url":"https://academic.oup.com/nar/article-pdf/51/D1/D877/48441554/gkac862.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:36200827","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/36200827","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:9825489","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/9825489","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkac862","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkac862","pdf_url":"https://academic.oup.com/nar/article-pdf/51/D1/D877/48441554/gkac862.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.4000000059604645,"id":"https://metadata.un.org/sdg/17","display_name":"Partnerships for the goals"}],"awards":[{"id":"https://openalex.org/G3124207498","display_name":null,"funder_award_id":"C15/BM/10397420","funder_id":"https://openalex.org/F4320321038","funder_display_name":"Fonds National de la Recherche Luxembourg"},{"id":"https://openalex.org/G3184052727","display_name":null,"funder_award_id":"C19/BM/13624979","funder_id":"https://openalex.org/F4320321038","funder_display_name":"Fonds National de la Recherche Luxembourg"}],"funders":[{"id":"https://openalex.org/F4320321038","display_name":"Fonds National de la Recherche Luxembourg","ror":"https://ror.org/039z13y21"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4302304569.pdf","grobid_xml":"https://content.openalex.org/works/W4302304569.grobid-xml"},"referenced_works_count":67,"referenced_works":["https://openalex.org/W1016059894","https://openalex.org/W1963580381","https://openalex.org/W1964904043","https://openalex.org/W1989277387","https://openalex.org/W1991594587","https://openalex.org/W1996266503","https://openalex.org/W2010502047","https://openalex.org/W2022273281","https://openalex.org/W2045949302","https://openalex.org/W2051962629","https://openalex.org/W2058539819","https://openalex.org/W2062812115","https://openalex.org/W2103017472","https://openalex.org/W2110839476","https://openalex.org/W2111288662","https://openalex.org/W2118258530","https://openalex.org/W2121604817","https://openalex.org/W2123073085","https://openalex.org/W2124146523","https://openalex.org/W2128001125","https://openalex.org/W2146512944","https://openalex.org/W2164906049","https://openalex.org/W2294516783","https://openalex.org/W2295088026","https://openalex.org/W2323328911","https://openalex.org/W2345356016","https://openalex.org/W2363676876","https://openalex.org/W2471828796","https://openalex.org/W2472255748","https://openalex.org/W2513473844","https://openalex.org/W2525396412","https://openalex.org/W2528785712","https://openalex.org/W2541359632","https://openalex.org/W2557833574","https://openalex.org/W2604527271","https://openalex.org/W2612467560","https://openalex.org/W2734519160","https://openalex.org/W2762632609","https://openalex.org/W2767891136","https://openalex.org/W2769400169","https://openalex.org/W2772784997","https://openalex.org/W2802220252","https://openalex.org/W2891678790","https://openalex.org/W2921781039","https://openalex.org/W2949313807","https://openalex.org/W2961082130","https://openalex.org/W2964315448","https://openalex.org/W2981831923","https://openalex.org/W2986691533","https://openalex.org/W2993083975","https://openalex.org/W3006567489","https://openalex.org/W3007541218","https://openalex.org/W3012661126","https://openalex.org/W3106653192","https://openalex.org/W3110177075","https://openalex.org/W3127981559","https://openalex.org/W3129731532","https://openalex.org/W3143409077","https://openalex.org/W3155713776","https://openalex.org/W3156563345","https://openalex.org/W3180357956","https://openalex.org/W3180909105","https://openalex.org/W3204520392","https://openalex.org/W3206132791","https://openalex.org/W4211069396","https://openalex.org/W4233698560","https://openalex.org/W6786831332"],"related_works":["https://openalex.org/W2912862995","https://openalex.org/W3129816939","https://openalex.org/W2101501829","https://openalex.org/W2985427592","https://openalex.org/W2003194288","https://openalex.org/W2060263731","https://openalex.org/W391093122","https://openalex.org/W4361305867","https://openalex.org/W1521239975","https://openalex.org/W2113159581"],"abstract_inverted_index":{"Prior":[0],"knowledge":[1],"of":[2,56,84,106,146],"perturbation":[3,107,177],"data":[4],"can":[5],"significantly":[6],"assist":[7],"in":[8,35,61,111,189],"inferring":[9],"the":[10,32,81,97,147,151],"relationship":[11],"between":[12],"chemical":[13],"perturbations":[14],"and":[15,46,70,109,131,142,150,170],"their":[16,168],"specific":[17],"transcriptional":[18,59],"response.":[19],"However,":[20],"current":[21],"databases":[22],"mostly":[23],"contain":[24],"cancer":[25,119],"cell":[26,76,99],"lines,":[27],"which":[28,101],"are":[29],"unsuitable":[30],"for":[31,128,134,157,180,193],"aforementioned":[33],"inference":[34],"non-cancer":[36,43,75,98,112,176,194],"cells,":[37],"such":[38],"as":[39,78,80],"cells":[40,113],"related":[41],"to":[42,63,115,163,167],"disease,":[44],"immunology":[45],"aging.":[47],"Here,":[48],"we":[49,90],"present":[50],"ChemPert":[51,123,137,185],"(https://chempert.uni.lu/),":[52],"a":[53,92],"database":[54],"consisting":[55],"82":[57],"270":[58],"signatures":[60],"response":[62],"2566":[64],"unique":[65],"perturbagens":[66],"(drugs,":[67],"small":[68],"molecules":[69],"protein":[71,82],"ligands)":[72],"across":[73],"167":[74],"types,":[77],"well":[79],"targets":[83],"57":[85],"818":[86],"perturbagens.":[87],"In":[88,121],"addition,":[89],"develop":[91],"computational":[93,152,171],"tool":[94],"that":[95],"leverages":[96],"datasets,":[100],"enables":[102],"more":[103],"accurate":[104],"predictions":[105],"responses":[108],"drugs":[110,133],"compared":[114],"those":[116],"based":[117],"onto":[118],"databases.":[120],"particular,":[122],"correctly":[124],"predicted":[125],"drug":[126],"effects":[127],"treating":[129],"hepatitis":[130],"novel":[132,182],"osteoarthritis.":[135],"The":[136],"web":[138],"interface":[139],"is":[140],"user-friendly":[141],"allows":[143],"easy":[144],"access":[145],"entire":[148],"datasets":[149,165,179],"tool,":[153],"providing":[154],"valuable":[155],"resources":[156],"both":[158],"experimental":[159],"researchers":[160,172],"who":[161,173],"wish":[162],"find":[164],"relevant":[166],"research":[169],"need":[174],"comprehensive":[175],"transcriptomics":[178],"developing":[181],"algorithms.":[183],"Overall,":[184],"will":[186],"facilitate":[187],"future":[188],"silico":[190],"compound":[191],"screening":[192],"cells.":[195]},"counts_by_year":[{"year":2026,"cited_by_count":6},{"year":2025,"cited_by_count":6},{"year":2024,"cited_by_count":5},{"year":2023,"cited_by_count":7}],"updated_date":"2026-08-11T07:18:39.950985","created_date":"2025-10-10T00:00:00"}
