{"id":"https://openalex.org/W4298088820","doi":"https://doi.org/10.1093/nar/gkac840","title":"Ribocentre: a database of ribozymes","display_name":"Ribocentre: a database of ribozymes","publication_year":2022,"publication_date":"2022-09-30","ids":{"openalex":"https://openalex.org/W4298088820","doi":"https://doi.org/10.1093/nar/gkac840","pmid":"https://pubmed.ncbi.nlm.nih.gov/36177882"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkac840","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkac840","pdf_url":"https://academic.oup.com/nar/article-pdf/51/D1/D262/48440509/gkac840.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/51/D1/D262/48440509/gkac840.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101927407","display_name":"Jie Deng","orcid":"https://orcid.org/0000-0003-1606-9259"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]},{"id":"https://openalex.org/I4210097354","display_name":"Sun Yat-sen Memorial Hospital","ror":"https://ror.org/01px77p81","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210097354"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jie Deng","raw_affiliation_strings":["Guangdong Provincial Key Laboratory of Malignant Tumor Epigenetics and Gene Regulation, Guangdong-Hong Kong Joint Laboratory for RNA Medicine, Sun Yat-Sen Memorial Hospital, Sun Yat-Sen University , Guangzhou 510120 , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Guangdong Provincial Key Laboratory of Malignant Tumor Epigenetics and Gene Regulation, Guangdong-Hong Kong Joint Laboratory for RNA Medicine, Sun Yat-Sen Memorial Hospital, Sun Yat-Sen University , Guangzhou 510120 , China","institution_ids":["https://openalex.org/I157773358","https://openalex.org/I4210097354"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103893613","display_name":"Yaohuang Shi","orcid":null},"institutions":[{"id":"https://openalex.org/I30809798","display_name":"ShanghaiTech University","ror":"https://ror.org/030bhh786","country_code":"CN","type":"education","lineage":["https://openalex.org/I30809798"]},{"id":"https://openalex.org/I4210090512","display_name":"Guangzhou Experimental Station","ror":"https://ror.org/00f2c2516","country_code":"CN","type":"facility","lineage":["https://openalex.org/I107851509","https://openalex.org/I4210090512","https://openalex.org/I4210127390","https://openalex.org/I4210151987"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yaohuang Shi","raw_affiliation_strings":["Guangzhou Laboratory, Guangzhou International Bio Island , Guangzhou 510005 , China","School of Life Science and Technology, ShanghaiTech University , Shanghai , 201210 , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Guangzhou Laboratory, Guangzhou International Bio Island , Guangzhou 510005 , China","institution_ids":["https://openalex.org/I4210090512"]},{"raw_affiliation_string":"School of Life Science and Technology, ShanghaiTech University , Shanghai , 201210 , China","institution_ids":["https://openalex.org/I30809798"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067802380","display_name":"Xuemei Peng","orcid":"https://orcid.org/0000-0002-5363-3085"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]},{"id":"https://openalex.org/I4210097354","display_name":"Sun Yat-sen Memorial Hospital","ror":"https://ror.org/01px77p81","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210097354"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xuemei Peng","raw_affiliation_strings":["Guangdong Provincial Key Laboratory of Malignant Tumor Epigenetics and Gene Regulation, Guangdong-Hong Kong Joint Laboratory for RNA Medicine, Sun Yat-Sen Memorial Hospital, Sun Yat-Sen University , Guangzhou 510120 , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Guangdong Provincial Key Laboratory of Malignant Tumor Epigenetics and Gene Regulation, Guangdong-Hong Kong Joint Laboratory for RNA Medicine, Sun Yat-Sen Memorial Hospital, Sun Yat-Sen University , Guangzhou 510120 , China","institution_ids":["https://openalex.org/I157773358","https://openalex.org/I4210097354"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023349195","display_name":"Yuanlin He","orcid":"https://orcid.org/0000-0001-7019-6756"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]},{"id":"https://openalex.org/I4210097354","display_name":"Sun Yat-sen Memorial Hospital","ror":"https://ror.org/01px77p81","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210097354"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yuanlin He","raw_affiliation_strings":["Guangdong Provincial Key Laboratory of Malignant Tumor Epigenetics and Gene Regulation, Guangdong-Hong Kong Joint Laboratory for RNA Medicine, Sun Yat-Sen Memorial Hospital, Sun Yat-Sen University , Guangzhou 510120 , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Guangdong Provincial Key Laboratory of Malignant Tumor Epigenetics and Gene Regulation, Guangdong-Hong Kong Joint Laboratory for RNA Medicine, Sun Yat-Sen Memorial Hospital, Sun Yat-Sen University , Guangzhou 510120 , China","institution_ids":["https://openalex.org/I157773358","https://openalex.org/I4210097354"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038258771","display_name":"Xiaoxue Chen","orcid":"https://orcid.org/0000-0002-2077-6020"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]},{"id":"https://openalex.org/I4210097354","display_name":"Sun Yat-sen Memorial Hospital","ror":"https://ror.org/01px77p81","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210097354"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiaoxue Chen","raw_affiliation_strings":["Department of pharmacy, Sun-Yat-Sen Memorial Hospital, Sun Yat-sen University , Guangzhou 510120 , China","Guangdong Provincial Key Laboratory of Malignant Tumor Epigenetics and Gene Regulation, Guangdong-Hong Kong Joint Laboratory for RNA Medicine, Sun Yat-Sen Memorial Hospital, Sun Yat-Sen University , Guangzhou 510120 , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of pharmacy, Sun-Yat-Sen Memorial Hospital, Sun Yat-sen University , Guangzhou 510120 , China","institution_ids":["https://openalex.org/I157773358","https://openalex.org/I4210097354"]},{"raw_affiliation_string":"Guangdong Provincial Key Laboratory of Malignant Tumor Epigenetics and Gene Regulation, Guangdong-Hong Kong Joint Laboratory for RNA Medicine, Sun Yat-Sen Memorial Hospital, Sun Yat-Sen University , Guangzhou 510120 , China","institution_ids":["https://openalex.org/I157773358","https://openalex.org/I4210097354"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102860093","display_name":"Mengxiao Li","orcid":"https://orcid.org/0000-0003-3949-3503"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]},{"id":"https://openalex.org/I4210097354","display_name":"Sun Yat-sen Memorial Hospital","ror":"https://ror.org/01px77p81","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210097354"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Mengxiao Li","raw_affiliation_strings":["Guangdong Provincial Key Laboratory of Malignant Tumor Epigenetics and Gene Regulation, Guangdong-Hong Kong Joint Laboratory for RNA Medicine, Sun Yat-Sen Memorial Hospital, Sun Yat-Sen University , Guangzhou 510120 , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Guangdong Provincial Key Laboratory of Malignant Tumor Epigenetics and Gene Regulation, Guangdong-Hong Kong Joint Laboratory for RNA Medicine, Sun Yat-Sen Memorial Hospital, Sun Yat-Sen University , Guangzhou 510120 , China","institution_ids":["https://openalex.org/I157773358","https://openalex.org/I4210097354"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023133529","display_name":"Xiaowei Lin","orcid":null},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]},{"id":"https://openalex.org/I4210097354","display_name":"Sun Yat-sen Memorial Hospital","ror":"https://ror.org/01px77p81","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210097354"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiaowei Lin","raw_affiliation_strings":["Department of Urology, Sun Yat-Sen Memorial Hospital, Sun Yat-Sen University , Guangzhou 510120 , China","Guangdong Provincial Key Laboratory of Malignant Tumor Epigenetics and Gene Regulation, Guangdong-Hong Kong Joint Laboratory for RNA Medicine, Sun Yat-Sen Memorial Hospital, Sun Yat-Sen University , Guangzhou 510120 , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Urology, Sun Yat-Sen Memorial Hospital, Sun Yat-Sen University , Guangzhou 510120 , China","institution_ids":["https://openalex.org/I157773358","https://openalex.org/I4210097354"]},{"raw_affiliation_string":"Guangdong Provincial Key Laboratory of Malignant Tumor Epigenetics and Gene Regulation, Guangdong-Hong Kong Joint Laboratory for RNA Medicine, Sun Yat-Sen Memorial Hospital, Sun Yat-Sen University , Guangzhou 510120 , China","institution_ids":["https://openalex.org/I157773358","https://openalex.org/I4210097354"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005629417","display_name":"Wenjian Liao","orcid":"https://orcid.org/0000-0001-9823-9949"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]},{"id":"https://openalex.org/I4210097354","display_name":"Sun Yat-sen Memorial Hospital","ror":"https://ror.org/01px77p81","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210097354"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Wenjian Liao","raw_affiliation_strings":["Department of Urology, Sun Yat-Sen Memorial Hospital, Sun Yat-Sen University , Guangzhou 510120 , China","Guangdong Provincial Key Laboratory of Malignant Tumor Epigenetics and Gene Regulation, Guangdong-Hong Kong Joint Laboratory for RNA Medicine, Sun Yat-Sen Memorial Hospital, Sun Yat-Sen University , Guangzhou 510120 , China"],"raw_orcid":"https://orcid.org/0000-0001-9823-9949","affiliations":[{"raw_affiliation_string":"Department of Urology, Sun Yat-Sen Memorial Hospital, Sun Yat-Sen University , Guangzhou 510120 , China","institution_ids":["https://openalex.org/I157773358","https://openalex.org/I4210097354"]},{"raw_affiliation_string":"Guangdong Provincial Key Laboratory of Malignant Tumor Epigenetics and Gene Regulation, Guangdong-Hong Kong Joint Laboratory for RNA Medicine, Sun Yat-Sen Memorial Hospital, Sun Yat-Sen University , Guangzhou 510120 , China","institution_ids":["https://openalex.org/I157773358","https://openalex.org/I4210097354"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085664354","display_name":"Yuanyin Huang","orcid":"https://orcid.org/0000-0002-9332-8157"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]},{"id":"https://openalex.org/I4210097354","display_name":"Sun Yat-sen Memorial Hospital","ror":"https://ror.org/01px77p81","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210097354"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yuanyin Huang","raw_affiliation_strings":["Guangdong Provincial Key Laboratory of Malignant Tumor Epigenetics and Gene Regulation, Guangdong-Hong Kong Joint Laboratory for RNA Medicine, Sun Yat-Sen Memorial Hospital, Sun Yat-Sen University , Guangzhou 510120 , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Guangdong Provincial Key Laboratory of Malignant Tumor Epigenetics and Gene Regulation, Guangdong-Hong Kong Joint Laboratory for RNA Medicine, Sun Yat-Sen Memorial Hospital, Sun Yat-Sen University , Guangzhou 510120 , China","institution_ids":["https://openalex.org/I157773358","https://openalex.org/I4210097354"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101823373","display_name":"Taijiao Jiang","orcid":"https://orcid.org/0000-0002-6071-0122"},"institutions":[{"id":"https://openalex.org/I4210090512","display_name":"Guangzhou Experimental Station","ror":"https://ror.org/00f2c2516","country_code":"CN","type":"facility","lineage":["https://openalex.org/I107851509","https://openalex.org/I4210090512","https://openalex.org/I4210127390","https://openalex.org/I4210151987"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Taijiao Jiang","raw_affiliation_strings":["Guangzhou Laboratory, Guangzhou International Bio Island , Guangzhou 510005 , China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Guangzhou Laboratory, Guangzhou International Bio Island , Guangzhou 510005 , China","institution_ids":["https://openalex.org/I4210090512"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054701391","display_name":"David M.J. Lilley","orcid":"https://orcid.org/0000-0001-6882-2818"},"institutions":[{"id":"https://openalex.org/I177639307","display_name":"University of Dundee","ror":"https://ror.org/03h2bxq36","country_code":"GB","type":"education","lineage":["https://openalex.org/I177639307"]},{"id":"https://openalex.org/I2801316944","display_name":"Cancer Research UK","ror":"https://ror.org/054225q67","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I2801316944"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"David\u00a0M J Lilley","raw_affiliation_strings":["Cancer Research UK Nucleic Acid Structure Research Group, MSI/WTB Complex, The University of Dundee , Dow Street, Dundee DD1 5EH, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Cancer Research UK Nucleic Acid Structure Research Group, MSI/WTB Complex, The University of Dundee , Dow Street, Dundee DD1 5EH, UK","institution_ids":["https://openalex.org/I177639307","https://openalex.org/I2801316944"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047497779","display_name":"Zhichao Miao","orcid":"https://orcid.org/0000-0002-5777-9815"},"institutions":[{"id":"https://openalex.org/I116953780","display_name":"Tongji University","ror":"https://ror.org/03rc6as71","country_code":"CN","type":"education","lineage":["https://openalex.org/I116953780"]},{"id":"https://openalex.org/I4210090512","display_name":"Guangzhou Experimental Station","ror":"https://ror.org/00f2c2516","country_code":"CN","type":"facility","lineage":["https://openalex.org/I107851509","https://openalex.org/I4210090512","https://openalex.org/I4210127390","https://openalex.org/I4210151987"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Zhichao Miao","raw_affiliation_strings":["Guangzhou Laboratory, Guangzhou International Bio Island , Guangzhou 510005 , China","Translational Research Institute of Brain and Brain-Like Intelligence and Department of Anesthesiology, Shanghai Fourth People's Hospital Affiliated to Tongji University School of Medicine , Shanghai 200434 , China"],"raw_orcid":"https://orcid.org/0000-0002-5777-9815","affiliations":[{"raw_affiliation_string":"Guangzhou Laboratory, Guangzhou International Bio Island , Guangzhou 510005 , China","institution_ids":["https://openalex.org/I4210090512"]},{"raw_affiliation_string":"Translational Research Institute of Brain and Brain-Like Intelligence and Department of Anesthesiology, Shanghai Fourth People's Hospital Affiliated to Tongji University School of Medicine , Shanghai 200434 , China","institution_ids":["https://openalex.org/I116953780"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5048398178","display_name":"Lin Huang","orcid":"https://orcid.org/0000-0002-2121-365X"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]},{"id":"https://openalex.org/I4210097354","display_name":"Sun Yat-sen Memorial Hospital","ror":"https://ror.org/01px77p81","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210097354"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Lin Huang","raw_affiliation_strings":["Guangdong Provincial Key Laboratory of Malignant Tumor Epigenetics and Gene Regulation, Guangdong-Hong Kong Joint Laboratory for RNA Medicine, Sun Yat-Sen Memorial Hospital, Sun Yat-Sen University , Guangzhou 510120 , China"],"raw_orcid":"https://orcid.org/0000-0002-2121-365X","affiliations":[{"raw_affiliation_string":"Guangdong Provincial Key Laboratory of Malignant Tumor Epigenetics and Gene Regulation, Guangdong-Hong Kong Joint Laboratory for RNA Medicine, Sun Yat-Sen Memorial Hospital, Sun Yat-Sen University , Guangzhou 510120 , China","institution_ids":["https://openalex.org/I157773358","https://openalex.org/I4210097354"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5047497779","https://openalex.org/A5048398178","https://openalex.org/A5054701391"],"corresponding_institution_ids":["https://openalex.org/I116953780","https://openalex.org/I157773358","https://openalex.org/I177639307","https://openalex.org/I2801316944","https://openalex.org/I4210090512","https://openalex.org/I4210097354"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":2.5071,"has_fulltext":true,"cited_by_count":36,"citation_normalized_percentile":{"value":0.90742755,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":98,"max":99},"biblio":{"volume":"51","issue":"D1","first_page":"D262","last_page":"D268"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10911","display_name":"Chemical Synthesis and Analysis","score":0.9876999855041504,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/ribozyme","display_name":"Ribozyme","score":0.9704222679138184},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.7771044969558716},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.6020958423614502},{"id":"https://openalex.org/keywords/ligase-ribozyme","display_name":"Ligase ribozyme","score":0.5836942195892334},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.5342031717300415},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.5082061290740967},{"id":"https://openalex.org/keywords/mammalian-cpeb3-ribozyme","display_name":"Mammalian CPEB3 ribozyme","score":0.4400936961174011},{"id":"https://openalex.org/keywords/function","display_name":"Function (biology)","score":0.43987658619880676},{"id":"https://openalex.org/keywords/nucleic-acid-structure","display_name":"Nucleic acid structure","score":0.43319380283355713},{"id":"https://openalex.org/keywords/timeline","display_name":"Timeline","score":0.41548216342926025},{"id":"https://openalex.org/keywords/rna","display_name":"RNA","score":0.4139765799045563},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.3093341588973999},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.17684146761894226},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.1271103024482727}],"concepts":[{"id":"https://openalex.org/C76346623","wikidata":"https://www.wikidata.org/wiki/Q205858","display_name":"Ribozyme","level":4,"score":0.9704222679138184},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7771044969558716},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.6020958423614502},{"id":"https://openalex.org/C1342335","wikidata":"https://www.wikidata.org/wiki/Q6545871","display_name":"Ligase ribozyme","level":5,"score":0.5836942195892334},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.5342031717300415},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.5082061290740967},{"id":"https://openalex.org/C30951146","wikidata":"https://www.wikidata.org/wiki/Q6745754","display_name":"Mammalian CPEB3 ribozyme","level":5,"score":0.4400936961174011},{"id":"https://openalex.org/C14036430","wikidata":"https://www.wikidata.org/wiki/Q3736076","display_name":"Function (biology)","level":2,"score":0.43987658619880676},{"id":"https://openalex.org/C126142528","wikidata":"https://www.wikidata.org/wiki/Q3771876","display_name":"Nucleic acid structure","level":4,"score":0.43319380283355713},{"id":"https://openalex.org/C4438859","wikidata":"https://www.wikidata.org/wiki/Q186117","display_name":"Timeline","level":2,"score":0.41548216342926025},{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.4139765799045563},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.3093341588973999},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.17684146761894226},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.1271103024482727},{"id":"https://openalex.org/C166957645","wikidata":"https://www.wikidata.org/wiki/Q23498","display_name":"Archaeology","level":1,"score":0.0},{"id":"https://openalex.org/C95457728","wikidata":"https://www.wikidata.org/wiki/Q309","display_name":"History","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009690","descriptor_name":"Nucleic Acid Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009690","descriptor_name":"Nucleic Acid Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009690","descriptor_name":"Nucleic Acid Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009690","descriptor_name":"Nucleic Acid Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009690","descriptor_name":"Nucleic Acid Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016337","descriptor_name":"RNA, Catalytic","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D016337","descriptor_name":"RNA, Catalytic","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D016337","descriptor_name":"RNA, Catalytic","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D016337","descriptor_name":"RNA, Catalytic","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D016337","descriptor_name":"RNA, Catalytic","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":6,"locations":[{"id":"doi:10.1093/nar/gkac840","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkac840","pdf_url":"https://academic.oup.com/nar/article-pdf/51/D1/D262/48440509/gkac840.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:36177882","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/36177882","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:discovery.dundee.ac.uk:publications/58ec9613-1e59-4653-b279-daeb0dc954d9","is_oa":true,"landing_page_url":"http://www.scopus.com/inward/record.url?scp=85145975690&partnerID=8YFLogxK","pdf_url":"https://discovery.dundee.ac.uk/ws/files/84908672/gkac840.pdf","source":{"id":"https://openalex.org/S4306400523","display_name":"Discovery Research Portal (University of Dundee)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I177639307","host_organization_name":"University of Dundee","host_organization_lineage":["https://openalex.org/I177639307"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Deng, J, Shi, Y, Peng, X, He, Y, Chen, X, Li, M, Lin, X, Liao, W, Huang, Y, Jiang, T, Lilley, D M J, Miao, Z & Huang, L 2023, 'Ribocentre : a database of ribozymes', Nucleic Acids Research, vol. 51, no. D1, pp. D262-D268. https://doi.org/10.1093/nar/gkac840","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:discovery.dundee.ac.uk:openaire/58ec9613-1e59-4653-b279-daeb0dc954d9","is_oa":true,"landing_page_url":"https://discovery.dundee.ac.uk/en/publications/58ec9613-1e59-4653-b279-daeb0dc954d9","pdf_url":null,"source":{"id":"https://openalex.org/S4306400523","display_name":"Discovery Research Portal (University of Dundee)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I177639307","host_organization_name":"University of Dundee","host_organization_lineage":["https://openalex.org/I177639307"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Deng, J, Shi, Y, Peng, X, He, Y, Chen, X, Li, M, Lin, X, Liao, W, Huang, Y, Jiang, T, Lilley, D M J, Miao, Z & Huang, L 2023, 'Ribocentre : a database of ribozymes', Nucleic Acids Research, vol. 51, no. D1, pp. D262-D268. https://doi.org/10.1093/nar/gkac840","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:discovery.dundee.ac.uk:openaire_cris_publications/58ec9613-1e59-4653-b279-daeb0dc954d9","is_oa":true,"landing_page_url":"https://discovery.dundee.ac.uk/files/84908672/gkac840.pdf","pdf_url":null,"source":{"id":"https://openalex.org/S4306400523","display_name":"Discovery Research Portal (University of Dundee)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I177639307","host_organization_name":"University of Dundee","host_organization_lineage":["https://openalex.org/I177639307"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Deng, J, Shi, Y, Peng, X, He, Y, Chen, X, Li, M, Lin, X, Liao, W, Huang, Y, Jiang, T, Lilley, D M J, Miao, Z & Huang, L 2023, 'Ribocentre : a database of ribozymes', Nucleic Acids Research, vol. 51, no. D1, pp. D262-D268. https://doi.org/10.1093/nar/gkac840","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:pubmedcentral.nih.gov:9825448","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/9825448","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkac840","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkac840","pdf_url":"https://academic.oup.com/nar/article-pdf/51/D1/D262/48440509/gkac840.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1963633","display_name":null,"funder_award_id":"2021YFF1200903","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"},{"id":"https://openalex.org/G3744120748","display_name":null,"funder_award_id":"32171191","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3886553587","display_name":null,"funder_award_id":"32270707","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G4133620392","display_name":null,"funder_award_id":"2020B1212030004","funder_id":"https://openalex.org/F4320324202","funder_display_name":"Guangdong Science and Technology Department"},{"id":"https://openalex.org/G4525425587","display_name":null,"funder_award_id":"2020B1212060018","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G4546662142","display_name":null,"funder_award_id":"18604","funder_id":"https://openalex.org/F4320319985","funder_display_name":"Cancer Research UK"},{"id":"https://openalex.org/G5017452720","display_name":null,"funder_award_id":"2022A1515010328","funder_id":"https://openalex.org/F4320324202","funder_display_name":"Guangdong Science and Technology Department"},{"id":"https://openalex.org/G5797066792","display_name":null,"funder_award_id":"2021YFF1200900","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"},{"id":"https://openalex.org/G7452967941","display_name":null,"funder_award_id":"2020B1212030004","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G7500324270","display_name":null,"funder_award_id":"A18604","funder_id":"https://openalex.org/F4320319985","funder_display_name":"Cancer Research UK"},{"id":"https://openalex.org/G7857219460","display_name":null,"funder_award_id":"2020B1212060018","funder_id":"https://openalex.org/F4320324202","funder_display_name":"Guangdong Science and Technology Department"},{"id":"https://openalex.org/G8931607637","display_name":null,"funder_award_id":"11722","funder_id":"https://openalex.org/F4320319985","funder_display_name":"Cancer Research UK"}],"funders":[{"id":"https://openalex.org/F4320319985","display_name":"Cancer Research UK","ror":"https://ror.org/054225q67"},{"id":"https://openalex.org/F4320320290","display_name":"University of Oxford","ror":"https://ror.org/052gg0110"},{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320324202","display_name":"Guangdong Science and Technology Department","ror":"https://ror.org/00tjzgn92"},{"id":"https://openalex.org/F4320335777","display_name":"National Key Research and Development Program of China","ror":null}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4298088820.pdf","grobid_xml":"https://content.openalex.org/works/W4298088820.grobid-xml"},"referenced_works_count":53,"referenced_works":["https://openalex.org/W176922563","https://openalex.org/W1485359814","https://openalex.org/W1502906266","https://openalex.org/W1556324230","https://openalex.org/W1585990551","https://openalex.org/W1612553237","https://openalex.org/W1965464174","https://openalex.org/W1968282235","https://openalex.org/W1970977492","https://openalex.org/W1975824025","https://openalex.org/W1976027096","https://openalex.org/W1980599178","https://openalex.org/W1994958501","https://openalex.org/W1999404678","https://openalex.org/W2006628267","https://openalex.org/W2007099197","https://openalex.org/W2014508207","https://openalex.org/W2021333801","https://openalex.org/W2022203526","https://openalex.org/W2039917092","https://openalex.org/W2043356161","https://openalex.org/W2046737757","https://openalex.org/W2050992506","https://openalex.org/W2052044977","https://openalex.org/W2061420032","https://openalex.org/W2063336974","https://openalex.org/W2069528284","https://openalex.org/W2072576600","https://openalex.org/W2076456108","https://openalex.org/W2086035360","https://openalex.org/W2091535033","https://openalex.org/W2096525273","https://openalex.org/W2097654784","https://openalex.org/W2122914162","https://openalex.org/W2128606349","https://openalex.org/W2134988785","https://openalex.org/W2148413684","https://openalex.org/W2148419405","https://openalex.org/W2167470206","https://openalex.org/W2346647512","https://openalex.org/W2523935508","https://openalex.org/W2605053716","https://openalex.org/W2616302079","https://openalex.org/W2912937049","https://openalex.org/W2969487030","https://openalex.org/W3100348855","https://openalex.org/W3104537585","https://openalex.org/W3136001083","https://openalex.org/W3157030426","https://openalex.org/W3159719254","https://openalex.org/W4205440119","https://openalex.org/W4289274885","https://openalex.org/W6629007567"],"related_works":["https://openalex.org/W2094375788","https://openalex.org/W2492191741","https://openalex.org/W2378807662","https://openalex.org/W2386840998","https://openalex.org/W2013117543","https://openalex.org/W2085851730","https://openalex.org/W4281716208","https://openalex.org/W2052928878","https://openalex.org/W2121088120","https://openalex.org/W1995316882"],"abstract_inverted_index":{"Ribozymes":[0],"are":[1],"excellent":[2],"systems":[3],"in":[4,14,39],"which":[5],"to":[6],"study":[7],"'sequence":[8],"-":[9,11],"structure":[10,66],"function'":[12],"relationships":[13,19],"RNA":[15,29],"molecules.":[16],"Understanding":[17],"these":[18],"may":[20],"greatly":[21],"help":[22],"structural":[23,34],"modeling":[24],"and":[25,31,67,83],"design":[26],"of":[27,89],"functional":[28,33],"structures":[30],"some":[32],"modules":[35],"could":[36],"be":[37],"repurposed":[38],"molecular":[40],"design.":[41],"At":[42],"present,":[43],"there":[44],"is":[45,98],"no":[46],"comprehensive":[47],"database":[48,61,97],"summarising":[49],"all":[50],"the":[51,90],"natural":[52],"ribozyme":[53,72],"families.":[54,73],"We":[55],"have":[56],"therefore":[57],"created":[58],"Ribocentre,":[59],"a":[60],"that":[62],"collects":[63],"together":[64,92],"sequence,":[65],"mechanistic":[68],"data":[69],"on":[70,78],"21":[71],"This":[74],"includes":[75],"available":[76,100],"information":[77],"timelines,":[79],"sequence":[80],"families,":[81],"secondary":[82],"tertiary":[84],"structures,":[85],"catalytic":[86],"mechanisms,":[87],"applications":[88],"ribozymes":[91],"with":[93],"key":[94],"publications.":[95],"The":[96],"publicly":[99],"at":[101],"https://www.ribocentre.org.":[102]},"counts_by_year":[{"year":2026,"cited_by_count":4},{"year":2025,"cited_by_count":9},{"year":2024,"cited_by_count":14},{"year":2023,"cited_by_count":9}],"updated_date":"2026-07-22T07:51:19.307946","created_date":"2025-10-10T00:00:00"}
