{"id":"https://openalex.org/W4296580701","doi":"https://doi.org/10.1093/nar/gkac791","title":"HTCA: a database with an in-depth characterization of the single-cell human transcriptome","display_name":"HTCA: a database with an in-depth characterization of the single-cell human transcriptome","publication_year":2022,"publication_date":"2022-09-21","ids":{"openalex":"https://openalex.org/W4296580701","doi":"https://doi.org/10.1093/nar/gkac791","pmid":"https://pubmed.ncbi.nlm.nih.gov/36130266"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkac791","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkac791","pdf_url":"https://academic.oup.com/nar/article-pdf/51/D1/D1019/48441377/gkac791.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/51/D1/D1019/48441377/gkac791.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5065452229","display_name":"Lu Pan","orcid":"https://orcid.org/0000-0001-7467-6992"},"institutions":[{"id":"https://openalex.org/I28166907","display_name":"Karolinska Institutet","ror":"https://ror.org/056d84691","country_code":"SE","type":"education","lineage":["https://openalex.org/I28166907"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Lu Pan","raw_affiliation_strings":["Department of Medical Epidemiology and Biostatistics, Karolinska Institutet , Solna\u00a017165, Sweden","Institute of Environmental Medicine, Karolinska Institutet , Solna\u00a017165, Sweden"],"affiliations":[{"raw_affiliation_string":"Department of Medical Epidemiology and Biostatistics, Karolinska Institutet , Solna\u00a017165, Sweden","institution_ids":["https://openalex.org/I28166907"]},{"raw_affiliation_string":"Institute of Environmental Medicine, Karolinska Institutet , Solna\u00a017165, Sweden","institution_ids":["https://openalex.org/I28166907"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108308564","display_name":"Shaobo Shan","orcid":"https://orcid.org/0000-0003-1015-7258"},"institutions":[{"id":"https://openalex.org/I183519381","display_name":"Capital Medical University","ror":"https://ror.org/013xs5b60","country_code":"CN","type":"education","lineage":["https://openalex.org/I183519381"]},{"id":"https://openalex.org/I4210087691","display_name":"Beijing Tian Tan Hospital","ror":"https://ror.org/003regz62","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210087691"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shaobo Shan","raw_affiliation_strings":["Department of Neurosurgery, Beijing Tiantan Hospital, Capital Medical University , Beijing\u00a0100050, China"],"affiliations":[{"raw_affiliation_string":"Department of Neurosurgery, Beijing Tiantan Hospital, Capital Medical University , Beijing\u00a0100050, China","institution_ids":["https://openalex.org/I4210087691","https://openalex.org/I183519381"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073099119","display_name":"Roman Tremmel","orcid":"https://orcid.org/0000-0003-1564-0433"},"institutions":[{"id":"https://openalex.org/I4210120009","display_name":"Dr. Margarete Fischer-Bosch-Institute of Clinical Pharmacology","ror":"https://ror.org/02pnjnj33","country_code":"DE","type":"facility","lineage":["https://openalex.org/I2802101015","https://openalex.org/I4210120009","https://openalex.org/I4403386655"]},{"id":"https://openalex.org/I8087733","display_name":"University of T\u00fcbingen","ror":"https://ror.org/03a1kwz48","country_code":"DE","type":"education","lineage":["https://openalex.org/I8087733"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Roman Tremmel","raw_affiliation_strings":["Dr. Margarete Fischer-Bosch Institute of Clinical Pharmacology , Stuttgart\u00a070376, Germany","University of Tuebingen , Tuebingen\u00a072076, Germany"],"affiliations":[{"raw_affiliation_string":"Dr. Margarete Fischer-Bosch Institute of Clinical Pharmacology , Stuttgart\u00a070376, Germany","institution_ids":["https://openalex.org/I4210120009"]},{"raw_affiliation_string":"University of Tuebingen , Tuebingen\u00a072076, Germany","institution_ids":["https://openalex.org/I8087733"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015025268","display_name":"Weiyuan Li","orcid":"https://orcid.org/0000-0002-8136-1400"},"institutions":[{"id":"https://openalex.org/I189210763","display_name":"Yunnan University","ror":"https://ror.org/0040axw97","country_code":"CN","type":"education","lineage":["https://openalex.org/I189210763"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Weiyuan Li","raw_affiliation_strings":["School of Medicine, Yunnan University , Kunnan,\u00a0Yunnan\u00a0650091, China"],"affiliations":[{"raw_affiliation_string":"School of Medicine, Yunnan University , Kunnan,\u00a0Yunnan\u00a0650091, China","institution_ids":["https://openalex.org/I189210763"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001345543","display_name":"Zehuan Liao","orcid":"https://orcid.org/0000-0002-7500-1521"},"institutions":[{"id":"https://openalex.org/I172675005","display_name":"Nanyang Technological University","ror":"https://ror.org/02e7b5302","country_code":"SG","type":"education","lineage":["https://openalex.org/I172675005"]},{"id":"https://openalex.org/I28166907","display_name":"Karolinska Institutet","ror":"https://ror.org/056d84691","country_code":"SE","type":"education","lineage":["https://openalex.org/I28166907"]}],"countries":["SE","SG"],"is_corresponding":false,"raw_author_name":"Zehuan Liao","raw_affiliation_strings":["Department of Microbiology, Tumor, and Cell Biology, Karolinska Institute , Solna\u00a017177, Sweden","School of Biological Sciences, Nanyang Technological University , 637 551, Singapore"],"affiliations":[{"raw_affiliation_string":"Department of Microbiology, Tumor, and Cell Biology, Karolinska Institute , Solna\u00a017177, Sweden","institution_ids":["https://openalex.org/I28166907"]},{"raw_affiliation_string":"School of Biological Sciences, Nanyang Technological University , 637 551, Singapore","institution_ids":["https://openalex.org/I172675005"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025849224","display_name":"Hangyu Shi","orcid":"https://orcid.org/0009-0009-9664-8453"},"institutions":[{"id":"https://openalex.org/I200296433","display_name":"Chinese Academy of Medical Sciences & Peking Union Medical College","ror":"https://ror.org/02drdmm93","country_code":"CN","type":"education","lineage":["https://openalex.org/I200296433"]},{"id":"https://openalex.org/I4210146387","display_name":"Guang\u2019anmen Hospital","ror":"https://ror.org/04gjmb875","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210146387"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hangyu Shi","raw_affiliation_strings":["Department of Acupuncture, Guang\u2019anmen Hospital, China Academy of Chinese Medical Sciences , Beijing\u00a0100029, China"],"affiliations":[{"raw_affiliation_string":"Department of Acupuncture, Guang\u2019anmen Hospital, China Academy of Chinese Medical Sciences , Beijing\u00a0100029, China","institution_ids":["https://openalex.org/I200296433","https://openalex.org/I4210146387"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5069892292","display_name":"Qishuang Chen","orcid":"https://orcid.org/0000-0003-3996-5005"},"institutions":[{"id":"https://openalex.org/I17747738","display_name":"Beijing University of Chinese Medicine","ror":"https://ror.org/05damtm70","country_code":"CN","type":"education","lineage":["https://openalex.org/I17747738"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qishuang Chen","raw_affiliation_strings":["Graduate School, Beijing University of Chinese Medicine , Beijing\u00a0100029, China"],"affiliations":[{"raw_affiliation_string":"Graduate School, Beijing University of Chinese Medicine , Beijing\u00a0100029, China","institution_ids":["https://openalex.org/I17747738"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100746441","display_name":"Xiaolu Zhang","orcid":"https://orcid.org/0000-0002-9350-2880"},"institutions":[{"id":"https://openalex.org/I154099455","display_name":"Shandong University","ror":"https://ror.org/0207yh398","country_code":"CN","type":"education","lineage":["https://openalex.org/I154099455"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Xiaolu Zhang","raw_affiliation_strings":["Department of Physiology and Pathophysiology, School of Basic Medical Sciences, Cheeloo College of Medicine, Shandong University , Jinan,\u00a0Shandong\u00a0250012, China"],"affiliations":[{"raw_affiliation_string":"Department of Physiology and Pathophysiology, School of Basic Medical Sciences, Cheeloo College of Medicine, Shandong University , Jinan,\u00a0Shandong\u00a0250012, China","institution_ids":["https://openalex.org/I154099455"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5056191820","display_name":"Xuexin Li","orcid":"https://orcid.org/0000-0001-5824-9720"},"institutions":[{"id":"https://openalex.org/I28166907","display_name":"Karolinska Institutet","ror":"https://ror.org/056d84691","country_code":"SE","type":"education","lineage":["https://openalex.org/I28166907"]}],"countries":["SE"],"is_corresponding":true,"raw_author_name":"Xuexin Li","raw_affiliation_strings":["Department of Medical Biochemistry and Biophysics, Karolinska Institutet , Solna\u00a017165, Sweden"],"affiliations":[{"raw_affiliation_string":"Department of Medical Biochemistry and Biophysics, Karolinska Institutet , Solna\u00a017165, Sweden","institution_ids":["https://openalex.org/I28166907"]}]}],"institutions":[],"countries_distinct_count":4,"institutions_distinct_count":9,"corresponding_author_ids":["https://openalex.org/A5056191820","https://openalex.org/A5100746441"],"corresponding_institution_ids":["https://openalex.org/I154099455","https://openalex.org/I28166907"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":3.2116,"has_fulltext":true,"cited_by_count":35,"citation_normalized_percentile":{"value":0.93278324,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":100},"biblio":{"volume":"51","issue":"D1","first_page":"D1019","last_page":"D1028"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11313","display_name":"Immune cells in cancer","score":0.9907000064849854,"subfield":{"id":"https://openalex.org/subfields/2403","display_name":"Immunology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11020","display_name":"Immune Cell Function and Interaction","score":0.9639999866485596,"subfield":{"id":"https://openalex.org/subfields/2403","display_name":"Immunology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.7395551204681396},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5751203894615173},{"id":"https://openalex.org/keywords/transcriptome","display_name":"Transcriptome","score":0.5738537907600403},{"id":"https://openalex.org/keywords/single-cell-analysis","display_name":"Single-cell analysis","score":0.48543602228164673},{"id":"https://openalex.org/keywords/phenotype","display_name":"Phenotype","score":0.4816959798336029},{"id":"https://openalex.org/keywords/population","display_name":"Population","score":0.4742794930934906},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.4296782612800598},{"id":"https://openalex.org/keywords/single-cell-sequencing","display_name":"Single cell sequencing","score":0.424807608127594},{"id":"https://openalex.org/keywords/cell","display_name":"Cell","score":0.4099634289741516},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.2962878942489624},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.2531454563140869}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7395551204681396},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5751203894615173},{"id":"https://openalex.org/C162317418","wikidata":"https://www.wikidata.org/wiki/Q252857","display_name":"Transcriptome","level":4,"score":0.5738537907600403},{"id":"https://openalex.org/C2776950831","wikidata":"https://www.wikidata.org/wiki/Q15635432","display_name":"Single-cell analysis","level":3,"score":0.48543602228164673},{"id":"https://openalex.org/C127716648","wikidata":"https://www.wikidata.org/wiki/Q104053","display_name":"Phenotype","level":3,"score":0.4816959798336029},{"id":"https://openalex.org/C2908647359","wikidata":"https://www.wikidata.org/wiki/Q2625603","display_name":"Population","level":2,"score":0.4742794930934906},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.4296782612800598},{"id":"https://openalex.org/C174749747","wikidata":"https://www.wikidata.org/wiki/Q15917269","display_name":"Single cell sequencing","level":5,"score":0.424807608127594},{"id":"https://openalex.org/C1491633281","wikidata":"https://www.wikidata.org/wiki/Q7868","display_name":"Cell","level":2,"score":0.4099634289741516},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.2962878942489624},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.2531454563140869},{"id":"https://openalex.org/C149923435","wikidata":"https://www.wikidata.org/wiki/Q37732","display_name":"Demography","level":1,"score":0.0},{"id":"https://openalex.org/C16671776","wikidata":"https://www.wikidata.org/wiki/Q5420592","display_name":"Exome sequencing","level":4,"score":0.0},{"id":"https://openalex.org/C144024400","wikidata":"https://www.wikidata.org/wiki/Q21201","display_name":"Sociology","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059010","descriptor_name":"Single-Cell Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059010","descriptor_name":"Single-Cell Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059010","descriptor_name":"Single-Cell Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059467","descriptor_name":"Transcriptome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059467","descriptor_name":"Transcriptome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059467","descriptor_name":"Transcriptome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1093/nar/gkac791","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkac791","pdf_url":"https://academic.oup.com/nar/article-pdf/51/D1/D1019/48441377/gkac791.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:36130266","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/36130266","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:dr.ntu.edu.sg:10356/169452","is_oa":true,"landing_page_url":"https://hdl.handle.net/10356/169452","pdf_url":null,"source":{"id":"https://openalex.org/S4306402609","display_name":"DR-NTU (Nanyang Technological University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I172675005","host_organization_name":"Nanyang Technological University","host_organization_lineage":["https://openalex.org/I172675005"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Journal Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:9825435","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/9825435","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkac791","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkac791","pdf_url":"https://academic.oup.com/nar/article-pdf/51/D1/D1019/48441377/gkac791.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1364868472","display_name":null,"funder_award_id":"2018-05973","funder_id":"https://openalex.org/F4320322581","funder_display_name":"Vetenskapsr\u00e5det"},{"id":"https://openalex.org/G3321450376","display_name":null,"funder_award_id":"05973","funder_id":"https://openalex.org/F4320322581","funder_display_name":"Vetenskapsr\u00e5det"},{"id":"https://openalex.org/G5356226767","display_name":null,"funder_award_id":"2018-0597","funder_id":"https://openalex.org/F4320322581","funder_display_name":"Vetenskapsr\u00e5det"},{"id":"https://openalex.org/G712881263","display_name":null,"funder_award_id":"2018-","funder_id":"https://openalex.org/F4320322581","funder_display_name":"Vetenskapsr\u00e5det"},{"id":"https://openalex.org/G8017506670","display_name":null,"funder_award_id":"8210100902","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320320869","display_name":"Robert Bosch Stiftung","ror":"https://ror.org/012kqkf58"},{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320322581","display_name":"Vetenskapsr\u00e5det","ror":"https://ror.org/03zttf063"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4296580701.pdf","grobid_xml":"https://content.openalex.org/works/W4296580701.grobid-xml"},"referenced_works_count":73,"referenced_works":["https://openalex.org/W1869362176","https://openalex.org/W2098502158","https://openalex.org/W2103017472","https://openalex.org/W2110041134","https://openalex.org/W2110065044","https://openalex.org/W2118258530","https://openalex.org/W2128016314","https://openalex.org/W2146512944","https://openalex.org/W2151572058","https://openalex.org/W2592811885","https://openalex.org/W2612519453","https://openalex.org/W2616922646","https://openalex.org/W2626653156","https://openalex.org/W2804847416","https://openalex.org/W2887326710","https://openalex.org/W2895456557","https://openalex.org/W2897044695","https://openalex.org/W2900850487","https://openalex.org/W2904647285","https://openalex.org/W2907514116","https://openalex.org/W2931036699","https://openalex.org/W2944073176","https://openalex.org/W2950682063","https://openalex.org/W2950976066","https://openalex.org/W2951506174","https://openalex.org/W2953263404","https://openalex.org/W2960029024","https://openalex.org/W2964619400","https://openalex.org/W2969948459","https://openalex.org/W2975589949","https://openalex.org/W2984472267","https://openalex.org/W2988464219","https://openalex.org/W2997280954","https://openalex.org/W3000676906","https://openalex.org/W3002417351","https://openalex.org/W3007935255","https://openalex.org/W3013151148","https://openalex.org/W3080668573","https://openalex.org/W3088401235","https://openalex.org/W3091035534","https://openalex.org/W3099179344","https://openalex.org/W3101697142","https://openalex.org/W3102588302","https://openalex.org/W3103797259","https://openalex.org/W3112600195","https://openalex.org/W3119521568","https://openalex.org/W3119671877","https://openalex.org/W3138055079","https://openalex.org/W3149417142","https://openalex.org/W3157263169","https://openalex.org/W3164692211","https://openalex.org/W3184729641","https://openalex.org/W3189285696","https://openalex.org/W3204443805","https://openalex.org/W3211595762","https://openalex.org/W3214158901","https://openalex.org/W3214755680","https://openalex.org/W3215796337","https://openalex.org/W4200135473","https://openalex.org/W4200166750","https://openalex.org/W4205559708","https://openalex.org/W4206259166","https://openalex.org/W4207072141","https://openalex.org/W4213108508","https://openalex.org/W4220708949","https://openalex.org/W4220856587","https://openalex.org/W4221112093","https://openalex.org/W4226106494","https://openalex.org/W4230640326","https://openalex.org/W4280598116","https://openalex.org/W4280633014","https://openalex.org/W4281716326","https://openalex.org/W4284885575"],"related_works":["https://openalex.org/W2033995502","https://openalex.org/W3046385446","https://openalex.org/W2530589656","https://openalex.org/W2090914063","https://openalex.org/W2739492614","https://openalex.org/W3091970064","https://openalex.org/W3203391403","https://openalex.org/W2952872148","https://openalex.org/W1964125404","https://openalex.org/W4300972446"],"abstract_inverted_index":{"Single-cell":[0],"RNA-sequencing":[1],"(scRNA-seq)":[2],"is":[3,48],"one":[4],"of":[5,17,33,89,138,147,158,184],"the":[6,34,129],"most":[7],"used":[8],"single-cell":[9,18,134,154],"omics":[10],"in":[11,123,174],"recent":[12],"decades.":[13],"The":[14],"exponential":[15],"growth":[16],"data":[19],"has":[20],"immense":[21],"potential":[22],"for":[23,194],"large-scale":[24],"integration":[25],"and":[26,84,93,125,141,150,153,161,187,191],"in-depth":[27,86],"explorations":[28,183],"that":[29],"are":[30],"more":[31],"representative":[32],"study":[35],"population.":[36],"Efforts":[37],"have":[38],"been":[39],"made":[40],"to":[41,103,170],"consolidate":[42],"published":[43],"data,":[44],"yet":[45],"extensive":[46],"characterization":[47],"still":[49],"lacking.":[50],"Many":[51],"focused":[52],"on":[53,61,75],"raw-data":[54],"database":[55,72],"constructions":[56],"while":[57],"others":[58],"concentrate":[59],"mainly":[60],"gene":[62,104,115],"expression":[63],"queries.":[64],"Hereby,":[65],"we":[66],"present":[67],"HTCA":[68,97,132,165,180],"(www.htcatlas.org),":[69],"an":[70],"interactive":[71,101],"constructed":[73],"based":[74],"\u223c2.3":[76],"million":[77],"high-quality":[78],"cells":[79],"from":[80],"\u223c3000":[81],"scRNA-seq":[82,177,197],"samples":[83],"comprised":[85],"phenotype":[87],"profiles":[88,137,146,157,190],"19":[90],"healthy":[91],"adult":[92,124,140,149,160,186],"matching":[94],"fetal":[95,126,142,151,162,188],"tissues.":[96,127,163],"provides":[98,166,192],"a":[99,175,195],"one-stop":[100],"query":[102],"signatures,":[105],"transcription":[106],"factor":[107],"(TF)":[108],"activities,":[109],"TF":[110],"motifs,":[111],"receptor-ligand":[112],"interactions,":[113],"enriched":[114],"ontology":[116],"(GO)":[117],"terms,":[118],"etc.":[119],"across":[120],"cell":[121],"types":[122],"At":[128],"same":[130],"time,":[131],"encompasses":[133],"splicing":[135],"variant":[136],"16":[139],"tissues,":[143,152],"spatial":[144],"transcriptomics":[145],"11":[148],"ATAC-sequencing":[155],"(scATAC-seq)":[156],"27":[159],"Besides,":[164],"online":[167],"analysis":[168],"tools":[169,193],"perform":[171],"major":[172],"steps":[173],"typical":[176],"analysis.":[178,198],"Altogether,":[179],"allows":[181],"real-time":[182],"multi-omics":[185],"phenotypic":[189],"flexible":[196]},"counts_by_year":[{"year":2025,"cited_by_count":9},{"year":2024,"cited_by_count":16},{"year":2023,"cited_by_count":9},{"year":2022,"cited_by_count":1}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}