{"id":"https://openalex.org/W4296778358","doi":"https://doi.org/10.1093/nar/gkac782","title":"QUADRatlas: the RNA G-quadruplex and RG4-binding proteins database","display_name":"QUADRatlas: the RNA G-quadruplex and RG4-binding proteins database","publication_year":2022,"publication_date":"2022-09-16","ids":{"openalex":"https://openalex.org/W4296778358","doi":"https://doi.org/10.1093/nar/gkac782","pmid":"https://pubmed.ncbi.nlm.nih.gov/36124670"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkac782","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkac782","pdf_url":"https://academic.oup.com/nar/advance-article-pdf/doi/10.1093/nar/gkac782/45890554/gkac782.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/advance-article-pdf/doi/10.1093/nar/gkac782/45890554/gkac782.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5023940957","display_name":"S\u00e9bastien Bourdon","orcid":null},"institutions":[{"id":"https://openalex.org/I134560555","display_name":"Universit\u00e9 Toulouse III - Paul Sabatier","ror":"https://ror.org/02v6kpv12","country_code":"FR","type":"education","lineage":["https://openalex.org/I134560555"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I193223587","display_name":"University of Trento","ror":"https://ror.org/05trd4x28","country_code":"IT","type":"education","lineage":["https://openalex.org/I193223587"]},{"id":"https://openalex.org/I4210087620","display_name":"Centre de Recherche en Canc\u00e9rologie de Toulouse","ror":"https://ror.org/003412r28","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I154526488","https://openalex.org/I4210087620"]}],"countries":["FR","IT"],"is_corresponding":false,"raw_author_name":"S\u00e9bastien Bourdon","raw_affiliation_strings":["Cancer Research Centre of Toulouse, INSERM UMR 1037 ,\u00a031037\u00a0 Toulouse , France","Laboratory of RNA Regulatory Networks, Department of Cellular, Computational and Integrative Biology (CIBIO), University of Trento ,\u00a038123\u00a0 Trento , Italy","Universit\u00e9 Toulouse III \u2013 Paul Sabatier ,\u00a031330\u00a0 Toulouse , France"],"affiliations":[{"raw_affiliation_string":"Cancer Research Centre of Toulouse, INSERM UMR 1037 ,\u00a031037\u00a0 Toulouse , France","institution_ids":["https://openalex.org/I4210087620","https://openalex.org/I154526488"]},{"raw_affiliation_string":"Laboratory of RNA Regulatory Networks, Department of Cellular, Computational and Integrative Biology (CIBIO), University of Trento ,\u00a038123\u00a0 Trento , Italy","institution_ids":["https://openalex.org/I193223587"]},{"raw_affiliation_string":"Universit\u00e9 Toulouse III \u2013 Paul Sabatier ,\u00a031330\u00a0 Toulouse , France","institution_ids":["https://openalex.org/I134560555"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024483151","display_name":"Pauline Herviou","orcid":"https://orcid.org/0009-0008-1927-1843"},"institutions":[{"id":"https://openalex.org/I134560555","display_name":"Universit\u00e9 Toulouse III - Paul Sabatier","ror":"https://ror.org/02v6kpv12","country_code":"FR","type":"education","lineage":["https://openalex.org/I134560555"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I4210087620","display_name":"Centre de Recherche en Canc\u00e9rologie de Toulouse","ror":"https://ror.org/003412r28","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I154526488","https://openalex.org/I4210087620"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Pauline Herviou","raw_affiliation_strings":["Cancer Research Centre of Toulouse, INSERM UMR 1037 ,\u00a031037\u00a0 Toulouse , France","Universit\u00e9 Toulouse III \u2013 Paul Sabatier ,\u00a031330\u00a0 Toulouse , France"],"affiliations":[{"raw_affiliation_string":"Cancer Research Centre of Toulouse, INSERM UMR 1037 ,\u00a031037\u00a0 Toulouse , France","institution_ids":["https://openalex.org/I4210087620","https://openalex.org/I154526488"]},{"raw_affiliation_string":"Universit\u00e9 Toulouse III \u2013 Paul Sabatier ,\u00a031330\u00a0 Toulouse , France","institution_ids":["https://openalex.org/I134560555"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5112535791","display_name":"Le\u00efla Dumas","orcid":null},"institutions":[{"id":"https://openalex.org/I134560555","display_name":"Universit\u00e9 Toulouse III - Paul Sabatier","ror":"https://ror.org/02v6kpv12","country_code":"FR","type":"education","lineage":["https://openalex.org/I134560555"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I4210087620","display_name":"Centre de Recherche en Canc\u00e9rologie de Toulouse","ror":"https://ror.org/003412r28","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I154526488","https://openalex.org/I4210087620"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Le\u00efla Dumas","raw_affiliation_strings":["Cancer Research Centre of Toulouse, INSERM UMR 1037 ,\u00a031037\u00a0 Toulouse , France","Universit\u00e9 Toulouse III \u2013 Paul Sabatier ,\u00a031330\u00a0 Toulouse , France"],"affiliations":[{"raw_affiliation_string":"Cancer Research Centre of Toulouse, INSERM UMR 1037 ,\u00a031037\u00a0 Toulouse , France","institution_ids":["https://openalex.org/I4210087620","https://openalex.org/I154526488"]},{"raw_affiliation_string":"Universit\u00e9 Toulouse III \u2013 Paul Sabatier ,\u00a031330\u00a0 Toulouse , France","institution_ids":["https://openalex.org/I134560555"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074312177","display_name":"Eliana Destefanis","orcid":"https://orcid.org/0000-0002-3804-6712"},"institutions":[{"id":"https://openalex.org/I193223587","display_name":"University of Trento","ror":"https://ror.org/05trd4x28","country_code":"IT","type":"education","lineage":["https://openalex.org/I193223587"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Eliana Destefanis","raw_affiliation_strings":["Laboratory of RNA Regulatory Networks, Department of Cellular, Computational and Integrative Biology (CIBIO), University of Trento ,\u00a038123\u00a0 Trento , Italy","Laboratory of Translational Genomics, Department of Cellular, Computational and Integrative Biology (CIBIO), University of Trento ,\u00a0 38123 \u00a0Trento, Italy"],"affiliations":[{"raw_affiliation_string":"Laboratory of RNA Regulatory Networks, Department of Cellular, Computational and Integrative Biology (CIBIO), University of Trento ,\u00a038123\u00a0 Trento , Italy","institution_ids":["https://openalex.org/I193223587"]},{"raw_affiliation_string":"Laboratory of Translational Genomics, Department of Cellular, Computational and Integrative Biology (CIBIO), University of Trento ,\u00a0 38123 \u00a0Trento, Italy","institution_ids":["https://openalex.org/I193223587"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051203100","display_name":"Andrea Zen","orcid":"https://orcid.org/0000-0002-7648-4078"},"institutions":[{"id":"https://openalex.org/I193223587","display_name":"University of Trento","ror":"https://ror.org/05trd4x28","country_code":"IT","type":"education","lineage":["https://openalex.org/I193223587"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Andrea Zen","raw_affiliation_strings":["Laboratory of RNA Regulatory Networks, Department of Cellular, Computational and Integrative Biology (CIBIO), University of Trento ,\u00a038123\u00a0 Trento , Italy"],"affiliations":[{"raw_affiliation_string":"Laboratory of RNA Regulatory Networks, Department of Cellular, Computational and Integrative Biology (CIBIO), University of Trento ,\u00a038123\u00a0 Trento , Italy","institution_ids":["https://openalex.org/I193223587"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085848823","display_name":"Anne Cammas","orcid":"https://orcid.org/0000-0002-3240-9172"},"institutions":[{"id":"https://openalex.org/I134560555","display_name":"Universit\u00e9 Toulouse III - Paul Sabatier","ror":"https://ror.org/02v6kpv12","country_code":"FR","type":"education","lineage":["https://openalex.org/I134560555"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I4210087620","display_name":"Centre de Recherche en Canc\u00e9rologie de Toulouse","ror":"https://ror.org/003412r28","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I154526488","https://openalex.org/I4210087620"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Anne Cammas","raw_affiliation_strings":["Cancer Research Centre of Toulouse, INSERM UMR 1037 ,\u00a031037\u00a0 Toulouse , France","Universit\u00e9 Toulouse III \u2013 Paul Sabatier ,\u00a031330\u00a0 Toulouse , France"],"affiliations":[{"raw_affiliation_string":"Cancer Research Centre of Toulouse, INSERM UMR 1037 ,\u00a031037\u00a0 Toulouse , France","institution_ids":["https://openalex.org/I4210087620","https://openalex.org/I154526488"]},{"raw_affiliation_string":"Universit\u00e9 Toulouse III \u2013 Paul Sabatier ,\u00a031330\u00a0 Toulouse , France","institution_ids":["https://openalex.org/I134560555"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038041116","display_name":"Stefania Millevoi","orcid":"https://orcid.org/0000-0003-1659-3552"},"institutions":[{"id":"https://openalex.org/I134560555","display_name":"Universit\u00e9 Toulouse III - Paul Sabatier","ror":"https://ror.org/02v6kpv12","country_code":"FR","type":"education","lineage":["https://openalex.org/I134560555"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I4210087620","display_name":"Centre de Recherche en Canc\u00e9rologie de Toulouse","ror":"https://ror.org/003412r28","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I154526488","https://openalex.org/I4210087620"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Stefania Millevoi","raw_affiliation_strings":["Cancer Research Centre of Toulouse, INSERM UMR 1037 ,\u00a031037\u00a0 Toulouse , France","Universit\u00e9 Toulouse III \u2013 Paul Sabatier ,\u00a031330\u00a0 Toulouse , France"],"affiliations":[{"raw_affiliation_string":"Cancer Research Centre of Toulouse, INSERM UMR 1037 ,\u00a031037\u00a0 Toulouse , France","institution_ids":["https://openalex.org/I4210087620","https://openalex.org/I154526488"]},{"raw_affiliation_string":"Universit\u00e9 Toulouse III \u2013 Paul Sabatier ,\u00a031330\u00a0 Toulouse , France","institution_ids":["https://openalex.org/I134560555"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5085703369","display_name":"Erik Dassi","orcid":"https://orcid.org/0000-0003-4487-0449"},"institutions":[{"id":"https://openalex.org/I193223587","display_name":"University of Trento","ror":"https://ror.org/05trd4x28","country_code":"IT","type":"education","lineage":["https://openalex.org/I193223587"]}],"countries":["IT"],"is_corresponding":true,"raw_author_name":"Erik Dassi","raw_affiliation_strings":["Laboratory of RNA Regulatory Networks, Department of Cellular, Computational and Integrative Biology (CIBIO), University of Trento ,\u00a038123\u00a0 Trento , Italy"],"affiliations":[{"raw_affiliation_string":"Laboratory of RNA Regulatory Networks, Department of Cellular, Computational and Integrative Biology (CIBIO), University of Trento ,\u00a038123\u00a0 Trento , Italy","institution_ids":["https://openalex.org/I193223587"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5038041116","https://openalex.org/A5085703369"],"corresponding_institution_ids":["https://openalex.org/I134560555","https://openalex.org/I154526488","https://openalex.org/I193223587","https://openalex.org/I4210087620"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":3.7324,"has_fulltext":true,"cited_by_count":46,"citation_normalized_percentile":{"value":0.94634131,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":98,"max":100},"biblio":{"volume":"51","issue":"D1","first_page":"D240","last_page":"D247"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10604","display_name":"RNA Research and Splicing","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.8629709482192993},{"id":"https://openalex.org/keywords/transcriptome","display_name":"Transcriptome","score":0.7091517448425293},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.6456615924835205},{"id":"https://openalex.org/keywords/g-quadruplex","display_name":"G-quadruplex","score":0.5955111384391785},{"id":"https://openalex.org/keywords/rna-binding-protein","display_name":"RNA-binding protein","score":0.5352827310562134},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.5302761793136597},{"id":"https://openalex.org/keywords/effector","display_name":"Effector","score":0.5025737285614014},{"id":"https://openalex.org/keywords/function","display_name":"Function (biology)","score":0.4987611770629883},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.4727771282196045},{"id":"https://openalex.org/keywords/regulation-of-gene-expression","display_name":"Regulation of gene expression","score":0.4644017219543457},{"id":"https://openalex.org/keywords/rna","display_name":"RNA","score":0.46437564492225647},{"id":"https://openalex.org/keywords/rna-seq","display_name":"RNA-Seq","score":0.42235875129699707},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.3790813684463501},{"id":"https://openalex.org/keywords/dna","display_name":"DNA","score":0.21863889694213867},{"id":"https://openalex.org/keywords/cell-biology","display_name":"Cell biology","score":0.1537904143333435}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8629709482192993},{"id":"https://openalex.org/C162317418","wikidata":"https://www.wikidata.org/wiki/Q252857","display_name":"Transcriptome","level":4,"score":0.7091517448425293},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.6456615924835205},{"id":"https://openalex.org/C83762044","wikidata":"https://www.wikidata.org/wiki/Q411641","display_name":"G-quadruplex","level":3,"score":0.5955111384391785},{"id":"https://openalex.org/C41282012","wikidata":"https://www.wikidata.org/wiki/Q3928341","display_name":"RNA-binding protein","level":4,"score":0.5352827310562134},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.5302761793136597},{"id":"https://openalex.org/C51785407","wikidata":"https://www.wikidata.org/wiki/Q2627568","display_name":"Effector","level":2,"score":0.5025737285614014},{"id":"https://openalex.org/C14036430","wikidata":"https://www.wikidata.org/wiki/Q3736076","display_name":"Function (biology)","level":2,"score":0.4987611770629883},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.4727771282196045},{"id":"https://openalex.org/C165864922","wikidata":"https://www.wikidata.org/wiki/Q411391","display_name":"Regulation of gene expression","level":3,"score":0.4644017219543457},{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.46437564492225647},{"id":"https://openalex.org/C107397762","wikidata":"https://www.wikidata.org/wiki/Q2542347","display_name":"RNA-Seq","level":5,"score":0.42235875129699707},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.3790813684463501},{"id":"https://openalex.org/C552990157","wikidata":"https://www.wikidata.org/wiki/Q7430","display_name":"DNA","level":2,"score":0.21863889694213867},{"id":"https://openalex.org/C95444343","wikidata":"https://www.wikidata.org/wiki/Q7141","display_name":"Cell biology","level":1,"score":0.1537904143333435}],"mesh":[{"descriptor_ui":"D001271","descriptor_name":"Atlases as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001271","descriptor_name":"Atlases as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001271","descriptor_name":"Atlases as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002352","descriptor_name":"Carrier Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D002352","descriptor_name":"Carrier Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D002352","descriptor_name":"Carrier Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D016601","descriptor_name":"RNA-Binding Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016601","descriptor_name":"RNA-Binding Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016601","descriptor_name":"RNA-Binding Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016601","descriptor_name":"RNA-Binding Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D016601","descriptor_name":"RNA-Binding Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D016601","descriptor_name":"RNA-Binding Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D054856","descriptor_name":"G-Quadruplexes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D054856","descriptor_name":"G-Quadruplexes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D054856","descriptor_name":"G-Quadruplexes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059467","descriptor_name":"Transcriptome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059467","descriptor_name":"Transcriptome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059467","descriptor_name":"Transcriptome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1093/nar/gkac782","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkac782","pdf_url":"https://academic.oup.com/nar/advance-article-pdf/doi/10.1093/nar/gkac782/45890554/gkac782.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:36124670","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/36124670","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:iris.unitn.it:11572/372846","is_oa":true,"landing_page_url":"https://academic.oup.com/nar/article/51/D1/D240/6702464?login=false","pdf_url":"https://academic.oup.com/nar/article-pdf/51/D1/D240/48441569/gkac782.pdf","source":{"id":"https://openalex.org/S4306401913","display_name":"Institutional Research Information System (Universit\u00e0 degli Studi di Trento)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I193223587","host_organization_name":"University of Trento","host_organization_lineage":["https://openalex.org/I193223587"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:HAL:hal-04903464v1","is_oa":false,"landing_page_url":"https://hal.science/hal-04903464","pdf_url":null,"source":{"id":"https://openalex.org/S4406922466","display_name":"SPIRE - Sciences Po Institutional REpository","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Research, 2023, 51 (D1), pp.D240-D247. &#x27E8;10.1093/nar/gkac782&#x27E9;","raw_type":"Journal articles"},{"id":"pmh:oai:pubmedcentral.nih.gov:9825518","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/9825518","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkac782","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkac782","pdf_url":"https://academic.oup.com/nar/advance-article-pdf/doi/10.1093/nar/gkac782/45890554/gkac782.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2999825209","display_name":"Insights into RNA G4ome: comprehensive characterization of G-quadruplex dependent translation controlled by RNA binding proteins","funder_award_id":"ANR-17-CE12-0017","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"},{"id":"https://openalex.org/G6803667113","display_name":null,"funder_award_id":"ANR-17","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"},{"id":"https://openalex.org/G8782773368","display_name":null,"funder_award_id":"ANR-17-CE12-0017-01","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"}],"funders":[{"id":"https://openalex.org/F4320320883","display_name":"Agence Nationale de la Recherche","ror":"https://ror.org/00rbzpz17"},{"id":"https://openalex.org/F4320321589","display_name":"Fondation pour la Recherche M\u00e9dicale","ror":"https://ror.org/04w6kn183"},{"id":"https://openalex.org/F4320322275","display_name":"Universit\u00e0 degli Studi di Trento","ror":"https://ror.org/05trd4x28"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4296778358.pdf","grobid_xml":"https://content.openalex.org/works/W4296778358.grobid-xml"},"referenced_works_count":46,"referenced_works":["https://openalex.org/W1672171675","https://openalex.org/W1829370794","https://openalex.org/W1964578544","https://openalex.org/W2043274355","https://openalex.org/W2065219073","https://openalex.org/W2107255195","https://openalex.org/W2122846880","https://openalex.org/W2290989326","https://openalex.org/W2307041907","https://openalex.org/W2336957559","https://openalex.org/W2469100205","https://openalex.org/W2518362417","https://openalex.org/W2522261353","https://openalex.org/W2537007468","https://openalex.org/W2558916969","https://openalex.org/W2561964990","https://openalex.org/W2611729001","https://openalex.org/W2730926509","https://openalex.org/W2760202013","https://openalex.org/W2767250718","https://openalex.org/W2811275403","https://openalex.org/W2894172608","https://openalex.org/W2900160090","https://openalex.org/W2901527454","https://openalex.org/W2913145970","https://openalex.org/W2913553814","https://openalex.org/W2917858269","https://openalex.org/W2982891084","https://openalex.org/W2983166786","https://openalex.org/W2996083167","https://openalex.org/W3002859220","https://openalex.org/W3031127341","https://openalex.org/W3031821708","https://openalex.org/W3039355910","https://openalex.org/W3093868212","https://openalex.org/W3107527779","https://openalex.org/W3111061871","https://openalex.org/W3112376646","https://openalex.org/W3113024442","https://openalex.org/W3185948385","https://openalex.org/W3210876647","https://openalex.org/W3217073427","https://openalex.org/W4206042670","https://openalex.org/W6637288986","https://openalex.org/W6730879846","https://openalex.org/W6779270264"],"related_works":["https://openalex.org/W1530034981","https://openalex.org/W4320492283","https://openalex.org/W4214695225","https://openalex.org/W2783284266","https://openalex.org/W3197607994","https://openalex.org/W4309090929","https://openalex.org/W2065181015","https://openalex.org/W2946950202","https://openalex.org/W3019044589","https://openalex.org/W2209951864"],"abstract_inverted_index":{"RNA":[0],"G-quadruplexes":[1],"(RG4s)":[2],"are":[3,13,37,74],"non-canonical,":[4],"disease-associated":[5],"post-transcriptional":[6],"regulators":[7,104],"of":[8,55,83,110,177,188],"gene":[9,139],"expression":[10],"whose":[11],"functions":[12],"driven":[14],"by":[15],"RNA-binding":[16],"proteins":[17],"(RBPs).":[18],"Being":[19],"able":[20],"to":[21,33,76,173],"explore":[22],"transcriptome-wide":[23],"RG4":[24,114,135,144],"formation":[25],"and":[26,39,57,69,105,117,141,147,153,161,183,190],"interaction":[27],"with":[28,66,85,89,101,193],"RBPs":[29,73],"is":[30,165],"thus":[31,98],"paramount":[32],"understanding":[34],"how":[35],"they":[36],"regulated":[38],"exploiting":[40],"them":[41],"as":[42],"potential":[43,103],"therapeutic":[44],"targets.":[45],"Towards":[46],"this":[47,121],"goal,":[48],"we":[49,79,123],"present":[50],"QUADRatlas":[51,164],"(https://rg4db.cibio.unitn.it),":[52],"a":[53,138,166],"database":[54],"experimentally-derived":[56],"computationally":[58],"predicted":[59],"RG4s":[60,84,100,189],"in":[61,137,162,170],"the":[62,108,155,175,185],"human":[63],"transcriptome,":[64],"enriched":[65],"biological":[67],"function":[68,116],"disease":[70],"associations.":[71],"As":[72],"key":[75],"their":[77,102,191],"function,":[78],"mined":[80],"known":[81],"interactions":[82,192],"such":[86],"proteins,":[87],"complemented":[88],"an":[90,130],"extensive":[91],"RBP":[92,131],"binding":[93],"sites":[94],"dataset.":[95],"Users":[96],"can":[97,132],"intersect":[99],"effectors,":[106],"enabling":[107,184],"formulation":[109],"novel":[111],"hypotheses":[112],"on":[113],"regulation,":[115],"pathogenicity.":[118],"To":[119],"support":[120],"capability,":[122],"provide":[124],"analysis":[125,187],"tools":[126],"for":[127,158],"predicting":[128],"whether":[129],"bind":[133],"RG4s,":[134,178],"enrichment":[136],"set,":[140],"de":[142],"novo":[143],"prediction.":[145],"Genome-browser":[146],"table":[148],"views":[149],"allow":[150],"exploring,":[151],"filtering,":[152],"downloading":[154],"data":[156,181],"quickly":[157],"individual":[159],"genes":[160],"batch.":[163],"significant":[167],"step":[168],"forward":[169],"our":[171],"ability":[172],"understand":[174],"biology":[176],"offering":[179],"unmatched":[180],"content":[182],"integrated":[186],"RBPs.":[194]},"counts_by_year":[{"year":2026,"cited_by_count":4},{"year":2025,"cited_by_count":25},{"year":2024,"cited_by_count":10},{"year":2023,"cited_by_count":7}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
