{"id":"https://openalex.org/W4281477116","doi":"https://doi.org/10.1093/nar/gkac383","title":"CFM-ID 4.0 \u2013 a web server for accurate MS-based metabolite identification","display_name":"CFM-ID 4.0 \u2013 a web server for accurate MS-based metabolite identification","publication_year":2022,"publication_date":"2022-05-24","ids":{"openalex":"https://openalex.org/W4281477116","doi":"https://doi.org/10.1093/nar/gkac383","pmid":"https://pubmed.ncbi.nlm.nih.gov/35610037"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkac383","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkac383","pdf_url":"https://academic.oup.com/nar/article-pdf/50/W1/W165/44379339/gkac383.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/50/W1/W165/44379339/gkac383.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100455723","display_name":"Fei Wang","orcid":"https://orcid.org/0000-0001-6712-3468"},"institutions":[{"id":"https://openalex.org/I154425047","display_name":"University of Alberta","ror":"https://ror.org/0160cpw27","country_code":"CA","type":"education","lineage":["https://openalex.org/I154425047"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Fei Wang","raw_affiliation_strings":["Department of Computing Science, University of Alberta , Edmonton , AB , T6G 2E8 , Canada"],"affiliations":[{"raw_affiliation_string":"Department of Computing Science, University of Alberta , Edmonton , AB , T6G 2E8 , Canada","institution_ids":["https://openalex.org/I154425047"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034063793","display_name":"Dana G. Allen","orcid":null},"institutions":[{"id":"https://openalex.org/I154425047","display_name":"University of Alberta","ror":"https://ror.org/0160cpw27","country_code":"CA","type":"education","lineage":["https://openalex.org/I154425047"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Dana Allen","raw_affiliation_strings":["Department of Biological Sciences, University of Alberta, Edmonton , AB , T6G 2E9 , Canada"],"affiliations":[{"raw_affiliation_string":"Department of Biological Sciences, University of Alberta, Edmonton , AB , T6G 2E9 , Canada","institution_ids":["https://openalex.org/I154425047"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061514282","display_name":"Siyang Tian","orcid":"https://orcid.org/0000-0002-7298-2520"},"institutions":[{"id":"https://openalex.org/I154425047","display_name":"University of Alberta","ror":"https://ror.org/0160cpw27","country_code":"CA","type":"education","lineage":["https://openalex.org/I154425047"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Siyang Tian","raw_affiliation_strings":["Department of Biological Sciences, University of Alberta, Edmonton , AB , T6G 2E9 , Canada"],"affiliations":[{"raw_affiliation_string":"Department of Biological Sciences, University of Alberta, Edmonton , AB , T6G 2E9 , Canada","institution_ids":["https://openalex.org/I154425047"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017496139","display_name":"Eponine Oler","orcid":null},"institutions":[{"id":"https://openalex.org/I154425047","display_name":"University of Alberta","ror":"https://ror.org/0160cpw27","country_code":"CA","type":"education","lineage":["https://openalex.org/I154425047"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Eponine Oler","raw_affiliation_strings":["Department of Biological Sciences, University of Alberta, Edmonton , AB , T6G 2E9 , Canada"],"affiliations":[{"raw_affiliation_string":"Department of Biological Sciences, University of Alberta, Edmonton , AB , T6G 2E9 , Canada","institution_ids":["https://openalex.org/I154425047"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085093503","display_name":"Vasuk Gautam","orcid":"https://orcid.org/0000-0002-9204-1963"},"institutions":[{"id":"https://openalex.org/I154425047","display_name":"University of Alberta","ror":"https://ror.org/0160cpw27","country_code":"CA","type":"education","lineage":["https://openalex.org/I154425047"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Vasuk Gautam","raw_affiliation_strings":["Department of Biological Sciences, University of Alberta, Edmonton , AB , T6G 2E9 , Canada"],"affiliations":[{"raw_affiliation_string":"Department of Biological Sciences, University of Alberta, Edmonton , AB , T6G 2E9 , Canada","institution_ids":["https://openalex.org/I154425047"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027200864","display_name":"Russell Greiner","orcid":"https://orcid.org/0000-0001-8327-934X"},"institutions":[{"id":"https://openalex.org/I154425047","display_name":"University of Alberta","ror":"https://ror.org/0160cpw27","country_code":"CA","type":"education","lineage":["https://openalex.org/I154425047"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Russell Greiner","raw_affiliation_strings":["Alberta Machine Intelligence Institute, University of Alberta , Edmonton , AB , T6G 2E8 , Canada","Department of Computing Science, University of Alberta , Edmonton , AB , T6G 2E8 , Canada"],"affiliations":[{"raw_affiliation_string":"Alberta Machine Intelligence Institute, University of Alberta , Edmonton , AB , T6G 2E8 , Canada","institution_ids":["https://openalex.org/I154425047"]},{"raw_affiliation_string":"Department of Computing Science, University of Alberta , Edmonton , AB , T6G 2E8 , Canada","institution_ids":["https://openalex.org/I154425047"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034592694","display_name":"Thomas Metz","orcid":"https://orcid.org/0000-0001-6049-3968"},"institutions":[{"id":"https://openalex.org/I142606810","display_name":"Pacific Northwest National Laboratory","ror":"https://ror.org/05h992307","country_code":"US","type":"facility","lineage":["https://openalex.org/I1325736334","https://openalex.org/I1330989302","https://openalex.org/I142606810","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Thomas\u00a0O Metz","raw_affiliation_strings":["Biological Sciences Division, Pacific Northwest National Laboratory , Richland , WA 99352 , USA"],"affiliations":[{"raw_affiliation_string":"Biological Sciences Division, Pacific Northwest National Laboratory , Richland , WA 99352 , USA","institution_ids":["https://openalex.org/I142606810"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5003573061","display_name":"David S. Wishart","orcid":"https://orcid.org/0000-0002-3207-2434"},"institutions":[{"id":"https://openalex.org/I142606810","display_name":"Pacific Northwest National Laboratory","ror":"https://ror.org/05h992307","country_code":"US","type":"facility","lineage":["https://openalex.org/I1325736334","https://openalex.org/I1330989302","https://openalex.org/I142606810","https://openalex.org/I39565521"]},{"id":"https://openalex.org/I154425047","display_name":"University of Alberta","ror":"https://ror.org/0160cpw27","country_code":"CA","type":"education","lineage":["https://openalex.org/I154425047"]}],"countries":["CA","US"],"is_corresponding":true,"raw_author_name":"David\u00a0S Wishart","raw_affiliation_strings":["Biological Sciences Division, Pacific Northwest National Laboratory , Richland , WA 99352 , USA","Department of Biological Sciences, University of Alberta, Edmonton , AB , T6G 2E9 , Canada","Department of Computing Science, University of Alberta , Edmonton , AB , T6G 2E8 , Canada","Department of Laboratory Medicine and Pathology, University of Alberta , Edmonton , AB , T6G 2B7 , Canada","Faculty of Pharmacy and Pharmaceutical Sciences, University of Alberta , Edmonton , AB , T6G 2H7 , Canada"],"affiliations":[{"raw_affiliation_string":"Biological Sciences Division, Pacific Northwest National Laboratory , Richland , WA 99352 , USA","institution_ids":["https://openalex.org/I142606810"]},{"raw_affiliation_string":"Department of Biological Sciences, University of Alberta, Edmonton , AB , T6G 2E9 , Canada","institution_ids":["https://openalex.org/I154425047"]},{"raw_affiliation_string":"Department of Computing Science, University of Alberta , Edmonton , AB , T6G 2E8 , Canada","institution_ids":["https://openalex.org/I154425047"]},{"raw_affiliation_string":"Department of Laboratory Medicine and Pathology, University of Alberta , Edmonton , AB , T6G 2B7 , Canada","institution_ids":["https://openalex.org/I154425047"]},{"raw_affiliation_string":"Faculty of Pharmacy and Pharmaceutical Sciences, University of Alberta , Edmonton , AB , T6G 2H7 , Canada","institution_ids":["https://openalex.org/I154425047"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5003573061"],"corresponding_institution_ids":["https://openalex.org/I142606810","https://openalex.org/I154425047"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":9.5479,"has_fulltext":true,"cited_by_count":115,"citation_normalized_percentile":{"value":0.98926013,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":100},"biblio":{"volume":"50","issue":"W1","first_page":"W165","last_page":"W174"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11667","display_name":"Advanced Chemical Sensor Technologies","score":0.9933000206947327,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10908","display_name":"Analytical Chemistry and Chromatography","score":0.9879000186920166,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.9202158451080322},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.678706169128418},{"id":"https://openalex.org/keywords/metabolite","display_name":"Metabolite","score":0.6333918571472168},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5339919924736023},{"id":"https://openalex.org/keywords/web-server","display_name":"Web server","score":0.5178871154785156},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.32923567295074463},{"id":"https://openalex.org/keywords/the-internet","display_name":"The Internet","score":0.3250334858894348},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.2530614137649536},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.16653823852539062},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.09094515442848206}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.9202158451080322},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.678706169128418},{"id":"https://openalex.org/C2777477808","wikidata":"https://www.wikidata.org/wiki/Q407595","display_name":"Metabolite","level":2,"score":0.6333918571472168},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5339919924736023},{"id":"https://openalex.org/C11392498","wikidata":"https://www.wikidata.org/wiki/Q11288","display_name":"Web server","level":3,"score":0.5178871154785156},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.32923567295074463},{"id":"https://openalex.org/C110875604","wikidata":"https://www.wikidata.org/wiki/Q75","display_name":"The Internet","level":2,"score":0.3250334858894348},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.2530614137649536},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.16653823852539062},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.09094515442848206},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003201","descriptor_name":"Computers","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003201","descriptor_name":"Computers","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003201","descriptor_name":"Computers","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D021241","descriptor_name":"Spectrometry, Mass, Electrospray Ionization","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D021241","descriptor_name":"Spectrometry, Mass, Electrospray Ionization","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D021241","descriptor_name":"Spectrometry, Mass, Electrospray Ionization","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053719","descriptor_name":"Tandem Mass Spectrometry","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D053719","descriptor_name":"Tandem Mass Spectrometry","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D053719","descriptor_name":"Tandem Mass Spectrometry","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D055432","descriptor_name":"Metabolomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D055432","descriptor_name":"Metabolomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D055432","descriptor_name":"Metabolomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1093/nar/gkac383","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkac383","pdf_url":"https://academic.oup.com/nar/article-pdf/50/W1/W165/44379339/gkac383.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:35610037","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/35610037","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:9252813","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/9252813","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"},{"id":"pmh:oai:osti.gov:1887176","is_oa":true,"landing_page_url":"https://www.osti.gov/biblio/1887176","pdf_url":"https://www.osti.gov/servlets/purl/1887176","source":{"id":"https://openalex.org/S4306402487","display_name":"OSTI OAI (U.S. Department of Energy Office of Scientific and Technical Information)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I139351228","host_organization_name":"Office of Scientific and Technical Information","host_organization_lineage":["https://openalex.org/I139351228"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":null}],"best_oa_location":{"id":"doi:10.1093/nar/gkac383","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkac383","pdf_url":"https://academic.oup.com/nar/article-pdf/50/W1/W165/44379339/gkac383.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1598349242","display_name":null,"funder_award_id":"U2CES030170","funder_id":"https://openalex.org/F4320337361","funder_display_name":"National Institute of Environmental Health Sciences"},{"id":"https://openalex.org/G2165548363","display_name":null,"funder_award_id":"Canada","funder_id":"https://openalex.org/F4320334593","funder_display_name":"Natural Sciences and Engineering Research Council of Canada"},{"id":"https://openalex.org/G3497591915","display_name":null,"funder_award_id":"(NIH)","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G7618577865","display_name":null,"funder_award_id":"U2CES030170","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"}],"funders":[{"id":"https://openalex.org/F4320310787","display_name":"Genome Canada","ror":"https://ror.org/029s29983"},{"id":"https://openalex.org/F4320314000","display_name":"Compute Canada","ror":"https://ror.org/03ty8yr27"},{"id":"https://openalex.org/F4320314212","display_name":"Alberta Machine Intelligence Institute","ror":null},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320334506","display_name":"Canadian Institutes of Health Research","ror":"https://ror.org/01gavpb45"},{"id":"https://openalex.org/F4320334593","display_name":"Natural Sciences and Engineering Research Council of Canada","ror":"https://ror.org/01h531d29"},{"id":"https://openalex.org/F4320337361","display_name":"National Institute of Environmental Health Sciences","ror":"https://ror.org/00j4k1h63"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4281477116.pdf","grobid_xml":"https://content.openalex.org/works/W4281477116.grobid-xml"},"referenced_works_count":40,"referenced_works":["https://openalex.org/W1601495365","https://openalex.org/W1977287658","https://openalex.org/W2037833102","https://openalex.org/W2047912505","https://openalex.org/W2059327215","https://openalex.org/W2067637119","https://openalex.org/W2084375915","https://openalex.org/W2088944177","https://openalex.org/W2101394823","https://openalex.org/W2107183338","https://openalex.org/W2115993694","https://openalex.org/W2125069590","https://openalex.org/W2133279176","https://openalex.org/W2179948434","https://openalex.org/W2285468881","https://openalex.org/W2462785116","https://openalex.org/W2504691963","https://openalex.org/W2548357532","https://openalex.org/W2560493283","https://openalex.org/W2769036842","https://openalex.org/W2777466035","https://openalex.org/W2783086602","https://openalex.org/W2786394271","https://openalex.org/W2791179513","https://openalex.org/W2811996766","https://openalex.org/W2921388451","https://openalex.org/W2922522932","https://openalex.org/W2937662637","https://openalex.org/W2978470213","https://openalex.org/W2980050594","https://openalex.org/W2990155150","https://openalex.org/W3109521451","https://openalex.org/W3118695441","https://openalex.org/W3131649000","https://openalex.org/W3194841450","https://openalex.org/W3199638376","https://openalex.org/W3211728852","https://openalex.org/W4206447491","https://openalex.org/W4212777030","https://openalex.org/W6770597616"],"related_works":["https://openalex.org/W2521903434","https://openalex.org/W1753739957","https://openalex.org/W2085913165","https://openalex.org/W2011282322","https://openalex.org/W2024044986","https://openalex.org/W2005550771","https://openalex.org/W323632276","https://openalex.org/W2418404479","https://openalex.org/W2078089453","https://openalex.org/W2016858531"],"abstract_inverted_index":{"The":[0,98],"CFM-ID":[1,39,99,174,205,255],"4.0":[2,40,100,175,206,256],"web":[3,101,207],"server":[4,102,208],"(https://cfmid.wishartlab.com)":[5],"is":[6,23,155,164,218],"an":[7,149],"online":[8],"tool":[9],"for":[10,54,244],"predicting,":[11],"annotating":[12],"and":[13,34,65,79,118,124,135,158,239,263,272],"interpreting":[14],"tandem":[15,50],"mass":[16,51],"(MS/MS)":[17],"spectra":[18,52,72,123],"of":[19,45,70,76,82,105,116,143],"small":[20,55,84,266],"molecules.":[21],"It":[22],"specifically":[24],"designed":[25],"to":[26,128,140,185,220,260],"assist":[27],"researchers":[28],"pursuing":[29],"studies":[30],"in":[31,119],"metabolomics,":[32],"exposomics":[33],"analytical":[35],"chemistry.":[36],"More":[37],"specifically,":[38],"supports":[41,222],"the:":[42],"1)":[43],"prediction":[44,134,152],"electrospray":[46],"ionization":[47],"quadrupole":[48],"time-of-flight":[49],"(ESI-QTOF-MS/MS)":[53],"molecules":[56],"over":[57],"multiple":[58],"collision":[59,96],"energies":[60],"(10":[61],"eV,":[62,64],"20":[63],"40":[66],"eV);":[67],"2)":[68],"annotation":[69],"ESI-QTOF-MS/MS":[71,90],"given":[73,89],"the":[74,77,204,261],"structure":[75],"compound;":[78],"3)":[80],"identification":[81,161,201,225,268],"a":[83,88,106,112,159,168,178,211],"molecule":[85,267],"that":[86,154,163,182,217],"generated":[87],"spectrum":[91],"at":[92],"one":[93],"or":[94,188],"more":[95,130,213,230,258,273],"energies.":[97],"makes":[103],"use":[104],"substantially":[107],"improved":[108,125],"MS":[109,241],"fragmentation":[110],"algorithm,":[111],"much":[113,212,257,269],"larger":[114],"database":[115],"experimental":[117],"silico":[120],"predicted":[121,246],"MS/MS":[122,132,150,227,249],"scoring":[126],"methods":[127],"offer":[129],"accurate":[131],"spectral":[133,151],"MS/MS-based":[136],"compound":[137,160],"identification.":[138],"Compared":[139],"earlier":[141],"versions":[142],"CFM-ID,":[144],"this":[145],"new":[146],"version":[147],"has":[148],"performance":[153],"\u223c22%":[156],"better":[157,166],"accuracy":[162],"\u223c35%":[165],"on":[167],"standard":[169],"(CASMI":[170],"2016)":[171],"testing":[172],"dataset.":[173],"also":[176],"features":[177],"neutral":[179],"loss":[180],"function":[181],"allows":[183],"users":[184],"identify":[186],"similar":[187],"substituent":[189],"compounds":[190],"where":[191],"no":[192],"match":[193],"can":[194],"be":[195],"found":[196],"using":[197],"CFM-ID's":[198],"regular":[199],"MS/MS-to-compound":[200],"utility.":[202],"Finally,":[203],"now":[209],"offers":[210],"refined":[214],"user":[215],"interface":[216],"easier":[219],"use,":[221],"molecular":[223],"formula":[224],"(from":[226],"data),":[228],"provides":[229],"interactively":[231],"viewable":[232],"data":[233],"(including":[234],"proposed":[235],"fragment":[236],"ion":[237],"structures)":[238],"displays":[240],"mirror":[242],"plots":[243],"comparing":[245],"with":[247],"observed":[248],"spectra.":[250],"These":[251],"improvements":[252],"should":[253,264],"make":[254,265],"useful":[259],"community":[262],"easier,":[270],"faster,":[271],"accurate.":[274]},"counts_by_year":[{"year":2026,"cited_by_count":7},{"year":2025,"cited_by_count":50},{"year":2024,"cited_by_count":36},{"year":2023,"cited_by_count":20},{"year":2022,"cited_by_count":2}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
