{"id":"https://openalex.org/W4225627383","doi":"https://doi.org/10.1093/nar/gkac373","title":"IBS 2.0: an upgraded illustrator for the visualization of biological sequences","display_name":"IBS 2.0: an upgraded illustrator for the visualization of biological sequences","publication_year":2022,"publication_date":"2022-04-29","ids":{"openalex":"https://openalex.org/W4225627383","doi":"https://doi.org/10.1093/nar/gkac373","pmid":"https://pubmed.ncbi.nlm.nih.gov/35580044"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkac373","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkac373","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1093/nar/gkac373","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5032071728","display_name":"Yubin Xie","orcid":"https://orcid.org/0000-0002-3566-4849"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]},{"id":"https://openalex.org/I4210128921","display_name":"The First Affiliated Hospital, Sun Yat-sen University","ror":"https://ror.org/037p24858","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210128921"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yubin Xie","raw_affiliation_strings":["School of Life Sciences, Precision Medicine Institute, the First Affiliated Hospital, Sun Yat-sen University , Guangzhou \u00a0510060,\u00a0 China"],"raw_orcid":"https://orcid.org/0000-0002-3566-4849","affiliations":[{"raw_affiliation_string":"School of Life Sciences, Precision Medicine Institute, the First Affiliated Hospital, Sun Yat-sen University , Guangzhou \u00a0510060,\u00a0 China","institution_ids":["https://openalex.org/I4210128921","https://openalex.org/I157773358"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100678634","display_name":"Huiqin Li","orcid":"https://orcid.org/0000-0001-6699-5205"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]},{"id":"https://openalex.org/I4210128921","display_name":"The First Affiliated Hospital, Sun Yat-sen University","ror":"https://ror.org/037p24858","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210128921"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Huiqin Li","raw_affiliation_strings":["School of Life Sciences, Precision Medicine Institute, the First Affiliated Hospital, Sun Yat-sen University , Guangzhou \u00a0510060,\u00a0 China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Life Sciences, Precision Medicine Institute, the First Affiliated Hospital, Sun Yat-sen University , Guangzhou \u00a0510060,\u00a0 China","institution_ids":["https://openalex.org/I4210128921","https://openalex.org/I157773358"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5114608848","display_name":"Xiaotong Luo","orcid":"https://orcid.org/0000-0002-7367-9910"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]},{"id":"https://openalex.org/I4210146711","display_name":"Sun Yat-sen University Cancer Center","ror":"https://ror.org/0400g8r85","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210146711"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiaotong Luo","raw_affiliation_strings":["State Key Laboratory of Oncology in South China, Cancer Center, Collaborative Innovation Center for Cancer Medicine, Sun Yat-sen University , Guangzhou \u00a0510060,\u00a0 China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"State Key Laboratory of Oncology in South China, Cancer Center, Collaborative Innovation Center for Cancer Medicine, Sun Yat-sen University , Guangzhou \u00a0510060,\u00a0 China","institution_ids":["https://openalex.org/I157773358","https://openalex.org/I4210146711"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100402303","display_name":"Hongyu Li","orcid":"https://orcid.org/0000-0002-6319-0900"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]},{"id":"https://openalex.org/I4210128921","display_name":"The First Affiliated Hospital, Sun Yat-sen University","ror":"https://ror.org/037p24858","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210128921"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hongyu Li","raw_affiliation_strings":["School of Life Sciences, Precision Medicine Institute, the First Affiliated Hospital, Sun Yat-sen University , Guangzhou \u00a0510060,\u00a0 China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Life Sciences, Precision Medicine Institute, the First Affiliated Hospital, Sun Yat-sen University , Guangzhou \u00a0510060,\u00a0 China","institution_ids":["https://openalex.org/I4210128921","https://openalex.org/I157773358"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101154346","display_name":"Qiuyuan Gao","orcid":null},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]},{"id":"https://openalex.org/I4210128921","display_name":"The First Affiliated Hospital, Sun Yat-sen University","ror":"https://ror.org/037p24858","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210128921"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qiuyuan Gao","raw_affiliation_strings":["School of Life Sciences, Precision Medicine Institute, the First Affiliated Hospital, Sun Yat-sen University , Guangzhou \u00a0510060,\u00a0 China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Life Sciences, Precision Medicine Institute, the First Affiliated Hospital, Sun Yat-sen University , Guangzhou \u00a0510060,\u00a0 China","institution_ids":["https://openalex.org/I4210128921","https://openalex.org/I157773358"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058754179","display_name":"Luowanyue Zhang","orcid":null},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]},{"id":"https://openalex.org/I4210128921","display_name":"The First Affiliated Hospital, Sun Yat-sen University","ror":"https://ror.org/037p24858","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210128921"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Luowanyue Zhang","raw_affiliation_strings":["School of Life Sciences, Precision Medicine Institute, the First Affiliated Hospital, Sun Yat-sen University , Guangzhou \u00a0510060,\u00a0 China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Life Sciences, Precision Medicine Institute, the First Affiliated Hospital, Sun Yat-sen University , Guangzhou \u00a0510060,\u00a0 China","institution_ids":["https://openalex.org/I4210128921","https://openalex.org/I157773358"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008724634","display_name":"Yuyan Teng","orcid":null},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]},{"id":"https://openalex.org/I4210128921","display_name":"The First Affiliated Hospital, Sun Yat-sen University","ror":"https://ror.org/037p24858","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210128921"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yuyan Teng","raw_affiliation_strings":["School of Life Sciences, Precision Medicine Institute, the First Affiliated Hospital, Sun Yat-sen University , Guangzhou \u00a0510060,\u00a0 China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Life Sciences, Precision Medicine Institute, the First Affiliated Hospital, Sun Yat-sen University , Guangzhou \u00a0510060,\u00a0 China","institution_ids":["https://openalex.org/I4210128921","https://openalex.org/I157773358"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084067884","display_name":"Qi Zhao","orcid":"https://orcid.org/0009-0002-2513-5430"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]},{"id":"https://openalex.org/I4210146711","display_name":"Sun Yat-sen University Cancer Center","ror":"https://ror.org/0400g8r85","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210146711"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qi Zhao","raw_affiliation_strings":["State Key Laboratory of Oncology in South China, Cancer Center, Collaborative Innovation Center for Cancer Medicine, Sun Yat-sen University , Guangzhou \u00a0510060,\u00a0 China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"State Key Laboratory of Oncology in South China, Cancer Center, Collaborative Innovation Center for Cancer Medicine, Sun Yat-sen University , Guangzhou \u00a0510060,\u00a0 China","institution_ids":["https://openalex.org/I157773358","https://openalex.org/I4210146711"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5090129059","display_name":"Zhixiang Zuo","orcid":"https://orcid.org/0000-0002-2492-2689"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]},{"id":"https://openalex.org/I4210146711","display_name":"Sun Yat-sen University Cancer Center","ror":"https://ror.org/0400g8r85","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210146711"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhixiang Zuo","raw_affiliation_strings":["State Key Laboratory of Oncology in South China, Cancer Center, Collaborative Innovation Center for Cancer Medicine, Sun Yat-sen University , Guangzhou \u00a0510060,\u00a0 China"],"raw_orcid":"https://orcid.org/0000-0002-2492-2689","affiliations":[{"raw_affiliation_string":"State Key Laboratory of Oncology in South China, Cancer Center, Collaborative Innovation Center for Cancer Medicine, Sun Yat-sen University , Guangzhou \u00a0510060,\u00a0 China","institution_ids":["https://openalex.org/I157773358","https://openalex.org/I4210146711"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5079092787","display_name":"Jian Ren","orcid":"https://orcid.org/0000-0002-4161-1292"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]},{"id":"https://openalex.org/I4210128921","display_name":"The First Affiliated Hospital, Sun Yat-sen University","ror":"https://ror.org/037p24858","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210128921"]},{"id":"https://openalex.org/I4210146711","display_name":"Sun Yat-sen University Cancer Center","ror":"https://ror.org/0400g8r85","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210146711"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Jian Ren","raw_affiliation_strings":["School of Life Sciences, Precision Medicine Institute, the First Affiliated Hospital, Sun Yat-sen University , Guangzhou \u00a0510060,\u00a0 China","State Key Laboratory of Oncology in South China, Cancer Center, Collaborative Innovation Center for Cancer Medicine, Sun Yat-sen University , Guangzhou \u00a0510060,\u00a0 China"],"raw_orcid":"https://orcid.org/0000-0002-4161-1292","affiliations":[{"raw_affiliation_string":"School of Life Sciences, Precision Medicine Institute, the First Affiliated Hospital, Sun Yat-sen University , Guangzhou \u00a0510060,\u00a0 China","institution_ids":["https://openalex.org/I4210128921","https://openalex.org/I157773358"]},{"raw_affiliation_string":"State Key Laboratory of Oncology in South China, Cancer Center, Collaborative Innovation Center for Cancer Medicine, Sun Yat-sen University , Guangzhou \u00a0510060,\u00a0 China","institution_ids":["https://openalex.org/I157773358","https://openalex.org/I4210146711"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":10,"corresponding_author_ids":["https://openalex.org/A5079092787"],"corresponding_institution_ids":["https://openalex.org/I157773358","https://openalex.org/I4210128921","https://openalex.org/I4210146711"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":14.293,"has_fulltext":false,"cited_by_count":212,"citation_normalized_percentile":{"value":0.99483201,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":97,"max":100},"biblio":{"volume":"50","issue":"W1","first_page":"W420","last_page":"W426"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9965999722480774,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9936000108718872,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.8527997732162476},{"id":"https://openalex.org/keywords/uniprot","display_name":"UniProt","score":0.6931734085083008},{"id":"https://openalex.org/keywords/biological-data","display_name":"Biological data","score":0.6141011714935303},{"id":"https://openalex.org/keywords/upload","display_name":"Upload","score":0.5449801683425903},{"id":"https://openalex.org/keywords/biological-database","display_name":"Biological database","score":0.541293740272522},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5008697509765625},{"id":"https://openalex.org/keywords/schematic","display_name":"Schematic","score":0.4996914863586426},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.4888117015361786},{"id":"https://openalex.org/keywords/refseq","display_name":"RefSeq","score":0.4797878861427307},{"id":"https://openalex.org/keywords/resource","display_name":"Resource (disambiguation)","score":0.4616360366344452},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.3864375650882721},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.356295108795166},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.3528326153755188},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.34093141555786133},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.24117004871368408},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.13723331689834595},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.11770150065422058},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.10577458143234253}],"concepts":[{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.8527997732162476},{"id":"https://openalex.org/C202264299","wikidata":"https://www.wikidata.org/wiki/Q905695","display_name":"UniProt","level":3,"score":0.6931734085083008},{"id":"https://openalex.org/C201797286","wikidata":"https://www.wikidata.org/wiki/Q4914986","display_name":"Biological data","level":2,"score":0.6141011714935303},{"id":"https://openalex.org/C71901391","wikidata":"https://www.wikidata.org/wiki/Q7126699","display_name":"Upload","level":2,"score":0.5449801683425903},{"id":"https://openalex.org/C20901353","wikidata":"https://www.wikidata.org/wiki/Q4117139","display_name":"Biological database","level":2,"score":0.541293740272522},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5008697509765625},{"id":"https://openalex.org/C192328126","wikidata":"https://www.wikidata.org/wiki/Q4514647","display_name":"Schematic","level":2,"score":0.4996914863586426},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4888117015361786},{"id":"https://openalex.org/C151810110","wikidata":"https://www.wikidata.org/wiki/Q7307074","display_name":"RefSeq","level":4,"score":0.4797878861427307},{"id":"https://openalex.org/C206345919","wikidata":"https://www.wikidata.org/wiki/Q20380951","display_name":"Resource (disambiguation)","level":2,"score":0.4616360366344452},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3864375650882721},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.356295108795166},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.3528326153755188},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.34093141555786133},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.24117004871368408},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.13723331689834595},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.11770150065422058},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.10577458143234253},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.0},{"id":"https://openalex.org/C24326235","wikidata":"https://www.wikidata.org/wiki/Q126095","display_name":"Electronic engineering","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000078326","descriptor_name":"Data Visualization","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000078326","descriptor_name":"Data Visualization","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000078326","descriptor_name":"Data Visualization","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015723","descriptor_name":"Gene Library","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015723","descriptor_name":"Gene Library","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015723","descriptor_name":"Gene Library","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/nar/gkac373","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkac373","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:35580044","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/35580044","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:9252815","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/9252815","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkac373","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkac373","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1619931070","display_name":null,"funder_award_id":"U1611261","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G4396385107","display_name":null,"funder_award_id":"2017YFA0106700","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"},{"id":"https://openalex.org/G6195224835","display_name":null,"funder_award_id":"81772614","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G6565237491","display_name":null,"funder_award_id":"31801105","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G6621109035","display_name":null,"funder_award_id":"81802438","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G7663631214","display_name":null,"funder_award_id":"2020A1515010220","funder_id":"https://openalex.org/F4320337111","funder_display_name":"Basic and Applied Basic Research Foundation of Guangdong Province"},{"id":"https://openalex.org/G8085049015","display_name":null,"funder_award_id":"31771462","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320335777","display_name":"National Key Research and Development Program of China","ror":null},{"id":"https://openalex.org/F4320337111","display_name":"Basic and Applied Basic Research Foundation of Guangdong Province","ror":null}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":16,"referenced_works":["https://openalex.org/W1979880724","https://openalex.org/W2027410891","https://openalex.org/W2058489202","https://openalex.org/W2058788882","https://openalex.org/W2069157810","https://openalex.org/W2104189207","https://openalex.org/W2107158607","https://openalex.org/W2138814742","https://openalex.org/W2140638448","https://openalex.org/W2166305185","https://openalex.org/W2173732482","https://openalex.org/W3091701318","https://openalex.org/W3093868212","https://openalex.org/W3095583226","https://openalex.org/W3101645555","https://openalex.org/W3112376646"],"related_works":["https://openalex.org/W2947085902","https://openalex.org/W2107691364","https://openalex.org/W4241827326","https://openalex.org/W4242739003","https://openalex.org/W4225627383","https://openalex.org/W4237629094","https://openalex.org/W2125816119","https://openalex.org/W4243601081","https://openalex.org/W4238718120","https://openalex.org/W4231170962"],"abstract_inverted_index":{"The":[0],"visualization":[1,92,99,151],"of":[2,14,20,30,43,60,100,126,152,164],"biological":[3,44,75,101,128,153],"sequences":[4,76,102,154],"with":[5],"various":[6],"functional":[7],"elements":[8,70],"is":[9],"fundamental":[10],"for":[11,56],"the":[12,18,28,31,41,58,67,104,107,114,150,161],"publication":[13],"scientific":[15],"achievements":[16],"in":[17,40,72,81,94,145,155],"field":[19],"molecular":[21],"and":[22,63,84,106,124],"cellular":[23],"biology.":[24],"However,":[25],"due":[26],"to":[27,112,148],"limitations":[29],"currently":[32],"used":[33],"applications,":[34],"there":[35],"are":[36],"still":[37],"considerable":[38],"challenges":[39],"preparation":[42],"schematic":[45],"diagrams.":[46],"Here,":[47],"we":[48,88],"present":[49],"a":[50,82,90,117,139],"professional":[51],"tool":[52],"called":[53],"IBS":[54,73,95,135,146,165],"2.0":[55,147],"illustrating":[57],"organization":[59],"both":[61],"protein":[62],"nucleotide":[64],"sequences.":[65],"With":[66],"abundant":[68],"graphical":[69],"provided":[71],"2.0,":[74,96,166],"can":[77],"be":[78],"easily":[79],"represented":[80],"concise":[83],"clear":[85],"way.":[86],"Moreover,":[87],"implemented":[89],"database":[91],"module":[93],"enabling":[97],"batch":[98],"from":[103],"UniProt":[105],"NCBI":[108],"RefSeq":[109],"databases.":[110],"Furthermore,":[111],"increase":[113],"design":[115],"efficiency,":[116],"resource":[118],"platform":[119],"that":[120],"allows":[121],"uploading,":[122],"retrieval,":[123],"browsing":[125],"existing":[127],"sequence":[129],"diagrams":[130],"has":[131],"been":[132],"integrated":[133],"into":[134],"2.0.":[136],"In":[137],"addition,":[138],"lightweight":[140],"JS":[141],"library":[142],"was":[143],"developed":[144],"assist":[149],"customized":[156],"web":[157],"services.":[158],"To":[159],"obtain":[160],"latest":[162],"version":[163],"please":[167],"visit":[168],"https://ibs.renlab.org.":[169]},"counts_by_year":[{"year":2026,"cited_by_count":47},{"year":2025,"cited_by_count":98},{"year":2024,"cited_by_count":45},{"year":2023,"cited_by_count":18},{"year":2022,"cited_by_count":4}],"updated_date":"2026-06-20T22:02:38.213706","created_date":"2025-10-10T00:00:00"}
