{"id":"https://openalex.org/W4280502047","doi":"https://doi.org/10.1093/nar/gkac345","title":"BeStSel: webserver for secondary structure and fold prediction for protein CD spectroscopy","display_name":"BeStSel: webserver for secondary structure and fold prediction for protein CD spectroscopy","publication_year":2022,"publication_date":"2022-05-10","ids":{"openalex":"https://openalex.org/W4280502047","doi":"https://doi.org/10.1093/nar/gkac345","pmid":"https://pubmed.ncbi.nlm.nih.gov/35544232"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkac345","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkac345","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1093/nar/gkac345","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5017372629","display_name":"Andr\u00e1s Micsonai","orcid":"https://orcid.org/0000-0002-2539-4080"},"institutions":[{"id":"https://openalex.org/I106118109","display_name":"E\u00f6tv\u00f6s Lor\u00e1nd University","ror":"https://ror.org/01jsq2704","country_code":"HU","type":"education","lineage":["https://openalex.org/I106118109"]}],"countries":["HU"],"is_corresponding":true,"raw_author_name":"Andr\u00e1s Micsonai","raw_affiliation_strings":["ELTE NAP Neuroimmunology Research Group, Department of Biochemistry, Institute of Biology, ELTE E\u00f6tv\u00f6s Lor\u00e1nd University , Budapest \u00a0H-1117,\u00a0 Hungary"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"ELTE NAP Neuroimmunology Research Group, Department of Biochemistry, Institute of Biology, ELTE E\u00f6tv\u00f6s Lor\u00e1nd University , Budapest \u00a0H-1117,\u00a0 Hungary","institution_ids":["https://openalex.org/I106118109"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5090812376","display_name":"\u00c9va Moussong","orcid":null},"institutions":[{"id":"https://openalex.org/I106118109","display_name":"E\u00f6tv\u00f6s Lor\u00e1nd University","ror":"https://ror.org/01jsq2704","country_code":"HU","type":"education","lineage":["https://openalex.org/I106118109"]}],"countries":["HU"],"is_corresponding":false,"raw_author_name":"\u00c9va Moussong","raw_affiliation_strings":["ELTE NAP Neuroimmunology Research Group, Department of Biochemistry, Institute of Biology, ELTE E\u00f6tv\u00f6s Lor\u00e1nd University , Budapest \u00a0H-1117,\u00a0 Hungary"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"ELTE NAP Neuroimmunology Research Group, Department of Biochemistry, Institute of Biology, ELTE E\u00f6tv\u00f6s Lor\u00e1nd University , Budapest \u00a0H-1117,\u00a0 Hungary","institution_ids":["https://openalex.org/I106118109"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5053324208","display_name":"Frank Wien","orcid":"https://orcid.org/0000-0002-0752-8735"},"institutions":[{"id":"https://openalex.org/I2801148539","display_name":"Synchrotron soleil","ror":"https://ror.org/01ydb3330","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I2738703131","https://openalex.org/I277688954","https://openalex.org/I2801148539","https://openalex.org/I4210128565"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Frank Wien","raw_affiliation_strings":["Synchrotron SOLEIL , Gif-sur-Yvette \u00a091192,\u00a0 France","SSOLEIL - Synchrotron SOLEIL (L'Orme des Merisiers Saint-Aubin - BP 48 91192 GIF-sur-YVETTE CEDEX - France)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Synchrotron SOLEIL , Gif-sur-Yvette \u00a091192,\u00a0 France","institution_ids":["https://openalex.org/I2801148539"]},{"raw_affiliation_string":"SSOLEIL - Synchrotron SOLEIL (L'Orme des Merisiers Saint-Aubin - BP 48 91192 GIF-sur-YVETTE CEDEX - France)","institution_ids":["https://openalex.org/I2801148539"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088095319","display_name":"Eszter Boros","orcid":null},"institutions":[{"id":"https://openalex.org/I106118109","display_name":"E\u00f6tv\u00f6s Lor\u00e1nd University","ror":"https://ror.org/01jsq2704","country_code":"HU","type":"education","lineage":["https://openalex.org/I106118109"]}],"countries":["HU"],"is_corresponding":false,"raw_author_name":"Eszter Boros","raw_affiliation_strings":["Department of Biochemistry, Institute of Biology, ELTE E\u00f6tv\u00f6s Lor\u00e1nd University , Budapest \u00a0H-1117,\u00a0 Hungary"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biochemistry, Institute of Biology, ELTE E\u00f6tv\u00f6s Lor\u00e1nd University , Budapest \u00a0H-1117,\u00a0 Hungary","institution_ids":["https://openalex.org/I106118109"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067658035","display_name":"Henrietta Vad\u00e1szi","orcid":null},"institutions":[{"id":"https://openalex.org/I106118109","display_name":"E\u00f6tv\u00f6s Lor\u00e1nd University","ror":"https://ror.org/01jsq2704","country_code":"HU","type":"education","lineage":["https://openalex.org/I106118109"]}],"countries":["HU"],"is_corresponding":false,"raw_author_name":"Henrietta Vad\u00e1szi","raw_affiliation_strings":["ELTE NAP Neuroimmunology Research Group, Department of Biochemistry, Institute of Biology, ELTE E\u00f6tv\u00f6s Lor\u00e1nd University , Budapest \u00a0H-1117,\u00a0 Hungary"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"ELTE NAP Neuroimmunology Research Group, Department of Biochemistry, Institute of Biology, ELTE E\u00f6tv\u00f6s Lor\u00e1nd University , Budapest \u00a0H-1117,\u00a0 Hungary","institution_ids":["https://openalex.org/I106118109"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062477256","display_name":"Nikoletta Murvai","orcid":"https://orcid.org/0000-0001-7477-0911"},"institutions":[{"id":"https://openalex.org/I106118109","display_name":"E\u00f6tv\u00f6s Lor\u00e1nd University","ror":"https://ror.org/01jsq2704","country_code":"HU","type":"education","lineage":["https://openalex.org/I106118109"]},{"id":"https://openalex.org/I4210151515","display_name":"Institute of Molecular Life Sciences","ror":"https://ror.org/04t4pws42","country_code":"HU","type":"facility","lineage":["https://openalex.org/I4210151515","https://openalex.org/I4387152226","https://openalex.org/I80251312"]},{"id":"https://openalex.org/I80251312","display_name":"HUN-REN Research Centre for Natural Sciences","ror":"https://ror.org/03zwxja46","country_code":"HU","type":"facility","lineage":["https://openalex.org/I4387152226","https://openalex.org/I80251312"]}],"countries":["HU"],"is_corresponding":false,"raw_author_name":"Nikoletta Murvai","raw_affiliation_strings":["Department of Biochemistry, Institute of Biology, ELTE E\u00f6tv\u00f6s Lor\u00e1nd University , Budapest \u00a0H-1117,\u00a0 Hungary","Institute of Enzymology, Research Centre for Natural Sciences , Budapest \u00a0H-1117,\u00a0 Hungary"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biochemistry, Institute of Biology, ELTE E\u00f6tv\u00f6s Lor\u00e1nd University , Budapest \u00a0H-1117,\u00a0 Hungary","institution_ids":["https://openalex.org/I106118109"]},{"raw_affiliation_string":"Institute of Enzymology, Research Centre for Natural Sciences , Budapest \u00a0H-1117,\u00a0 Hungary","institution_ids":["https://openalex.org/I4210151515","https://openalex.org/I80251312"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100647024","display_name":"Young\u2010Ho Lee","orcid":"https://orcid.org/0000-0002-8441-5814"},"institutions":[{"id":"https://openalex.org/I196345858","display_name":"Chungnam National University","ror":"https://ror.org/0227as991","country_code":"KR","type":"education","lineage":["https://openalex.org/I196345858"]},{"id":"https://openalex.org/I4210139925","display_name":"Korea Basic Science Institute","ror":"https://ror.org/0417sdw47","country_code":"KR","type":"facility","lineage":["https://openalex.org/I2801339556","https://openalex.org/I4210139925","https://openalex.org/I4210144908","https://openalex.org/I4387152098"]},{"id":"https://openalex.org/I88761825","display_name":"Korea University of Science and Technology","ror":"https://ror.org/000qzf213","country_code":"KR","type":"education","lineage":["https://openalex.org/I88761825"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Young-Ho Lee","raw_affiliation_strings":["Bio-Analytical Science, University of Science and Technology (UST) , Daejeon \u00a034113, Republic of Korea","Graduate School of Analytical Science and Technology (GRAST), Chungnam National University (CNU) , Daejeon \u00a034134, Republic of Korea","Research Center of Bioconvergence Analysis, Korea Basic Science Institute (KBSI) ,\u00a0 Ochang \u00a028119,\u00a0 Republic of Korea","UST - University of Science and Technology [Daejeon] (176 Gajeong-dong, Yuseong-gu, Daejeon - South Korea)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bio-Analytical Science, University of Science and Technology (UST) , Daejeon \u00a034113, Republic of Korea","institution_ids":["https://openalex.org/I88761825"]},{"raw_affiliation_string":"Graduate School of Analytical Science and Technology (GRAST), Chungnam National University (CNU) , Daejeon \u00a034134, Republic of Korea","institution_ids":["https://openalex.org/I196345858"]},{"raw_affiliation_string":"Research Center of Bioconvergence Analysis, Korea Basic Science Institute (KBSI) ,\u00a0 Ochang \u00a028119,\u00a0 Republic of Korea","institution_ids":["https://openalex.org/I4210139925"]},{"raw_affiliation_string":"UST - University of Science and Technology [Daejeon] (176 Gajeong-dong, Yuseong-gu, Daejeon - South Korea)","institution_ids":["https://openalex.org/I88761825"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101856172","display_name":"Tam\u00e1s Moln\u00e1r","orcid":"https://orcid.org/0000-0002-6842-2715"},"institutions":[{"id":"https://openalex.org/I106118109","display_name":"E\u00f6tv\u00f6s Lor\u00e1nd University","ror":"https://ror.org/01jsq2704","country_code":"HU","type":"education","lineage":["https://openalex.org/I106118109"]}],"countries":["HU"],"is_corresponding":false,"raw_author_name":"Tam\u00e1s Moln\u00e1r","raw_affiliation_strings":["ELTE NAP Neuroimmunology Research Group, Department of Biochemistry, Institute of Biology, ELTE E\u00f6tv\u00f6s Lor\u00e1nd University , Budapest \u00a0H-1117,\u00a0 Hungary"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"ELTE NAP Neuroimmunology Research Group, Department of Biochemistry, Institute of Biology, ELTE E\u00f6tv\u00f6s Lor\u00e1nd University , Budapest \u00a0H-1117,\u00a0 Hungary","institution_ids":["https://openalex.org/I106118109"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009755793","display_name":"Matthieu R\u00e9fr\u00e9giers","orcid":null},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I2801148539","display_name":"Synchrotron soleil","ror":"https://ror.org/01ydb3330","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I2738703131","https://openalex.org/I277688954","https://openalex.org/I2801148539","https://openalex.org/I4210128565"]},{"id":"https://openalex.org/I4210118525","display_name":"Centre de Biophysique Mol\u00e9culaire","ror":"https://ror.org/02dpqcy73","country_code":"FR","type":"facility","lineage":["https://openalex.org/I110017253","https://openalex.org/I12449238","https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I4210096427","https://openalex.org/I4210118525","https://openalex.org/I4210128300"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Matthieu R\u00e9fr\u00e9giers","raw_affiliation_strings":["Centre de Biophysique Mol\u00e9culaire, CNRS UPR4301 , Orl\u00e9ans , France","Synchrotron SOLEIL , Gif-sur-Yvette \u00a091192,\u00a0 France","SSOLEIL - Synchrotron SOLEIL (L'Orme des Merisiers Saint-Aubin - BP 48 91192 GIF-sur-YVETTE CEDEX - France)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centre de Biophysique Mol\u00e9culaire, CNRS UPR4301 , Orl\u00e9ans , France","institution_ids":["https://openalex.org/I4210118525","https://openalex.org/I1294671590"]},{"raw_affiliation_string":"Synchrotron SOLEIL , Gif-sur-Yvette \u00a091192,\u00a0 France","institution_ids":["https://openalex.org/I2801148539"]},{"raw_affiliation_string":"SSOLEIL - Synchrotron SOLEIL (L'Orme des Merisiers Saint-Aubin - BP 48 91192 GIF-sur-YVETTE CEDEX - France)","institution_ids":["https://openalex.org/I2801148539"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5022600763","display_name":"Yuji Goto","orcid":"https://orcid.org/0000-0003-1221-1270"},"institutions":[{"id":"https://openalex.org/I98285908","display_name":"The University of Osaka","ror":"https://ror.org/035t8zc32","country_code":"JP","type":"education","lineage":["https://openalex.org/I98285908"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Yuji Goto","raw_affiliation_strings":["Global Center for Medical Engineering and Informatics, Osaka University , Osaka \u00a0565-0871,\u00a0 Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Global Center for Medical Engineering and Informatics, Osaka University , Osaka \u00a0565-0871,\u00a0 Japan","institution_ids":["https://openalex.org/I98285908"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014517086","display_name":"\u00c1gnes Tantos","orcid":"https://orcid.org/0000-0003-1273-9841"},"institutions":[{"id":"https://openalex.org/I4210151515","display_name":"Institute of Molecular Life Sciences","ror":"https://ror.org/04t4pws42","country_code":"HU","type":"facility","lineage":["https://openalex.org/I4210151515","https://openalex.org/I4387152226","https://openalex.org/I80251312"]},{"id":"https://openalex.org/I80251312","display_name":"HUN-REN Research Centre for Natural Sciences","ror":"https://ror.org/03zwxja46","country_code":"HU","type":"facility","lineage":["https://openalex.org/I4387152226","https://openalex.org/I80251312"]}],"countries":["HU"],"is_corresponding":false,"raw_author_name":"\u00c1gnes Tantos","raw_affiliation_strings":["Institute of Enzymology, Research Centre for Natural Sciences , Budapest \u00a0H-1117,\u00a0 Hungary"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Enzymology, Research Centre for Natural Sciences , Budapest \u00a0H-1117,\u00a0 Hungary","institution_ids":["https://openalex.org/I4210151515","https://openalex.org/I80251312"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5069728005","display_name":"J\u00f3zsef Kardos","orcid":"https://orcid.org/0000-0002-2135-2932"},"institutions":[{"id":"https://openalex.org/I106118109","display_name":"E\u00f6tv\u00f6s Lor\u00e1nd University","ror":"https://ror.org/01jsq2704","country_code":"HU","type":"education","lineage":["https://openalex.org/I106118109"]}],"countries":["HU"],"is_corresponding":false,"raw_author_name":"J\u00f3zsef Kardos","raw_affiliation_strings":["ELTE NAP Neuroimmunology Research Group, Department of Biochemistry, Institute of Biology, ELTE E\u00f6tv\u00f6s Lor\u00e1nd University , Budapest \u00a0H-1117,\u00a0 Hungary"],"raw_orcid":"https://orcid.org/0000-0002-2135-2932","affiliations":[{"raw_affiliation_string":"ELTE NAP Neuroimmunology Research Group, Department of Biochemistry, Institute of Biology, ELTE E\u00f6tv\u00f6s Lor\u00e1nd University , Budapest \u00a0H-1117,\u00a0 Hungary","institution_ids":["https://openalex.org/I106118109"]}]}],"institutions":[],"countries_distinct_count":4,"institutions_distinct_count":12,"corresponding_author_ids":["https://openalex.org/A5017372629"],"corresponding_institution_ids":["https://openalex.org/I106118109"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":33.7086,"has_fulltext":true,"cited_by_count":432,"citation_normalized_percentile":{"value":0.99887317,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":99,"max":100},"biblio":{"volume":"50","issue":"W1","first_page":"W90","last_page":"W98"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11162","display_name":"Enzyme Structure and Function","score":0.9979000091552734,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10683","display_name":"Mass Spectrometry Techniques and Applications","score":0.9969000220298767,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/protein-secondary-structure","display_name":"Protein secondary structure","score":0.8416811227798462},{"id":"https://openalex.org/keywords/web-server","display_name":"Web server","score":0.7396050095558167},{"id":"https://openalex.org/keywords/in-silico","display_name":"In silico","score":0.6892057061195374},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.6705431938171387},{"id":"https://openalex.org/keywords/antiparallel","display_name":"Antiparallel (mathematics)","score":0.6362816095352173},{"id":"https://openalex.org/keywords/circular-dichroism","display_name":"Circular dichroism","score":0.5598627924919128},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5384767651557922},{"id":"https://openalex.org/keywords/protein-data-bank","display_name":"Protein Data Bank (RCSB PDB)","score":0.5141654014587402},{"id":"https://openalex.org/keywords/protein-structure","display_name":"Protein structure","score":0.476701945066452},{"id":"https://openalex.org/keywords/upload","display_name":"Upload","score":0.4496743977069855},{"id":"https://openalex.org/keywords/homology-modeling","display_name":"Homology modeling","score":0.4444783627986908},{"id":"https://openalex.org/keywords/crystallography","display_name":"Crystallography","score":0.4296978712081909},{"id":"https://openalex.org/keywords/biological-system","display_name":"Biological system","score":0.3882041573524475},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.37208086252212524},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.36344632506370544},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.241252601146698},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.2409929633140564},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.19342932105064392},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.14632070064544678},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.10281869769096375},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.09141972661018372}],"concepts":[{"id":"https://openalex.org/C62614982","wikidata":"https://www.wikidata.org/wiki/Q904984","display_name":"Protein secondary structure","level":2,"score":0.8416811227798462},{"id":"https://openalex.org/C11392498","wikidata":"https://www.wikidata.org/wiki/Q11288","display_name":"Web server","level":3,"score":0.7396050095558167},{"id":"https://openalex.org/C2775905019","wikidata":"https://www.wikidata.org/wiki/Q192572","display_name":"In silico","level":3,"score":0.6892057061195374},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.6705431938171387},{"id":"https://openalex.org/C142089489","wikidata":"https://www.wikidata.org/wiki/Q1053976","display_name":"Antiparallel (mathematics)","level":3,"score":0.6362816095352173},{"id":"https://openalex.org/C133571119","wikidata":"https://www.wikidata.org/wiki/Q899102","display_name":"Circular dichroism","level":2,"score":0.5598627924919128},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5384767651557922},{"id":"https://openalex.org/C65556437","wikidata":"https://www.wikidata.org/wiki/Q766195","display_name":"Protein Data Bank (RCSB PDB)","level":2,"score":0.5141654014587402},{"id":"https://openalex.org/C47701112","wikidata":"https://www.wikidata.org/wiki/Q735188","display_name":"Protein structure","level":2,"score":0.476701945066452},{"id":"https://openalex.org/C71901391","wikidata":"https://www.wikidata.org/wiki/Q7126699","display_name":"Upload","level":2,"score":0.4496743977069855},{"id":"https://openalex.org/C169627665","wikidata":"https://www.wikidata.org/wiki/Q5767913","display_name":"Homology modeling","level":3,"score":0.4444783627986908},{"id":"https://openalex.org/C8010536","wikidata":"https://www.wikidata.org/wiki/Q160398","display_name":"Crystallography","level":1,"score":0.4296978712081909},{"id":"https://openalex.org/C186060115","wikidata":"https://www.wikidata.org/wiki/Q30336093","display_name":"Biological system","level":1,"score":0.3882041573524475},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.37208086252212524},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.36344632506370544},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.241252601146698},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.2409929633140564},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.19342932105064392},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.14632070064544678},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.10281869769096375},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.09141972661018372},{"id":"https://openalex.org/C110875604","wikidata":"https://www.wikidata.org/wiki/Q75","display_name":"The Internet","level":2,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C115260700","wikidata":"https://www.wikidata.org/wiki/Q11408","display_name":"Magnetic field","level":2,"score":0.0},{"id":"https://openalex.org/C181199279","wikidata":"https://www.wikidata.org/wiki/Q8047","display_name":"Enzyme","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D002942","descriptor_name":"Circular Dichroism","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002942","descriptor_name":"Circular Dichroism","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002942","descriptor_name":"Circular Dichroism","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013057","descriptor_name":"Spectrum Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013057","descriptor_name":"Spectrum Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013057","descriptor_name":"Spectrum Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017433","descriptor_name":"Protein Structure, Secondary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017433","descriptor_name":"Protein Structure, Secondary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017433","descriptor_name":"Protein Structure, Secondary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064267","descriptor_name":"Intrinsically Disordered Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064267","descriptor_name":"Intrinsically Disordered Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064267","descriptor_name":"Intrinsically Disordered Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1093/nar/gkac345","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkac345","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:35544232","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/35544232","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:HAL:hal-03670788v1","is_oa":false,"landing_page_url":"https://hal.science/hal-03670788","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Research, In press, ⟨10.1093/nar/gkac345⟩","raw_type":"Journal articles"},{"id":"pmh:oai:pubmedcentral.nih.gov:9252784","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/9252784","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkac345","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkac345","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1839453711","display_name":null,"funder_award_id":"PD135510","funder_id":"https://openalex.org/F4320335908","funder_display_name":"Nemzeti Kutat\u00e1si, Fejleszt\u00e9si \u00e9s Innovaci\u00f3s Alap"},{"id":"https://openalex.org/G2739348658","display_name":null,"funder_award_id":"2017-1.2.1-NKP-2017-00002","funder_id":"https://openalex.org/F4320335908","funder_display_name":"Nemzeti Kutat\u00e1si, Fejleszt\u00e9si \u00e9s Innovaci\u00f3s Alap"},{"id":"https://openalex.org/G4362903488","display_name":null,"funder_award_id":"K138937","funder_id":"https://openalex.org/F4320335908","funder_display_name":"Nemzeti Kutat\u00e1si, Fejleszt\u00e9si \u00e9s Innovaci\u00f3s Alap"},{"id":"https://openalex.org/G4749484350","display_name":null,"funder_award_id":"2018-2.1.17-T\u00c9T-KR-2018-00008","funder_id":"https://openalex.org/F4320335908","funder_display_name":"Nemzeti Kutat\u00e1si, Fejleszt\u00e9si \u00e9s Innovaci\u00f3s Alap"},{"id":"https://openalex.org/G5268926520","display_name":null,"funder_award_id":"K125340","funder_id":"https://openalex.org/F4320335908","funder_display_name":"Nemzeti Kutat\u00e1si, Fejleszt\u00e9si \u00e9s Innovaci\u00f3s Alap"},{"id":"https://openalex.org/G5706858289","display_name":null,"funder_award_id":"2019-2.1.11-T\u00c9T","funder_id":"https://openalex.org/F4320335908","funder_display_name":"Nemzeti Kutat\u00e1si, Fejleszt\u00e9si \u00e9s Innovaci\u00f3s Alap"},{"id":"https://openalex.org/G6954325417","display_name":null,"funder_award_id":"K120391","funder_id":"https://openalex.org/F4320335908","funder_display_name":"Nemzeti Kutat\u00e1si, Fejleszt\u00e9si \u00e9s Innovaci\u00f3s Alap"}],"funders":[{"id":"https://openalex.org/F4320334764","display_name":"Japan Society for the Promotion of Science","ror":"https://ror.org/00hhkn466"},{"id":"https://openalex.org/F4320335908","display_name":"Nemzeti Kutat\u00e1si, Fejleszt\u00e9si \u00e9s Innovaci\u00f3s Alap","ror":null},{"id":"https://openalex.org/F4320336670","display_name":"Institute for Protein Research, Osaka University","ror":null}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":50,"referenced_works":["https://openalex.org/W1588979652","https://openalex.org/W1973464551","https://openalex.org/W1978592925","https://openalex.org/W1980516919","https://openalex.org/W1998490996","https://openalex.org/W2008708467","https://openalex.org/W2013513784","https://openalex.org/W2025938842","https://openalex.org/W2027118657","https://openalex.org/W2083816365","https://openalex.org/W2094331619","https://openalex.org/W2107677733","https://openalex.org/W2108067237","https://openalex.org/W2117404180","https://openalex.org/W2121484473","https://openalex.org/W2122675979","https://openalex.org/W2130695501","https://openalex.org/W2130939465","https://openalex.org/W2134057677","https://openalex.org/W2137325658","https://openalex.org/W2150510929","https://openalex.org/W2156343873","https://openalex.org/W2808618567","https://openalex.org/W2810430384","https://openalex.org/W2871400816","https://openalex.org/W2904017637","https://openalex.org/W2953536172","https://openalex.org/W2984295782","https://openalex.org/W3004209032","https://openalex.org/W3016845636","https://openalex.org/W3095170895","https://openalex.org/W3106745904","https://openalex.org/W3115315281","https://openalex.org/W3118168625","https://openalex.org/W3143081424","https://openalex.org/W3153066160","https://openalex.org/W3160113507","https://openalex.org/W3165678703","https://openalex.org/W3177828909","https://openalex.org/W3183475563","https://openalex.org/W3184560409","https://openalex.org/W3198054686","https://openalex.org/W3198802642","https://openalex.org/W3207451080","https://openalex.org/W3212711309","https://openalex.org/W3214690163","https://openalex.org/W3214870576","https://openalex.org/W4213009331","https://openalex.org/W4225413983","https://openalex.org/W6799490173"],"related_works":["https://openalex.org/W2161269054","https://openalex.org/W2418098683","https://openalex.org/W2731937419","https://openalex.org/W2045062364","https://openalex.org/W2017505838","https://openalex.org/W4247605755","https://openalex.org/W2728406523","https://openalex.org/W2026129058","https://openalex.org/W4244367189","https://openalex.org/W2056500170"],"abstract_inverted_index":{"Circular":[0],"dichroism":[1],"(CD)":[2],"spectroscopy":[3],"is":[4,104,178],"widely":[5],"used":[6],"to":[7,56,63,112,127,171],"characterize":[8],"the":[9,23,29,41,57,60,108,113,117,124,145,165,173],"secondary":[10,77,183],"structure":[11,78,137,184],"composition":[12],"of":[13,44,90,106,116,123,148],"proteins.":[14,46],"To":[15],"derive":[16],"accurate":[17,174],"and":[18,83,99,151],"detailed":[19],"structural":[20],"information":[21,74,100],"from":[22,164],"CD":[24,69,134,156,169],"spectra,":[25],"we":[26],"have":[27],"developed":[28],"Beta":[30],"Structure":[31],"Selection":[32],"(BeStSel)":[33],"method":[34,52,96],"(PNAS,":[35],"112,":[36],"E3095),":[37],"which":[38,177],"can":[39,189],"handle":[40],"spectral":[42],"diversity":[43],"\u03b2-structured":[45],"The":[47,158,186],"BeStSel":[48,72,187],"webserver":[49,125],"provides":[50,73],"this":[51],"with":[53,59,86],"useful":[54],"accessories":[55],"community":[58],"main":[61],"goal":[62],"analyze":[64],"single":[65],"or":[66],"multiple":[67],"protein":[68,109,149,175],"spectra.":[70],"Uniquely,":[71],"on":[75],"eight":[76],"components":[79],"including":[80],"parallel":[81],"\u03b2-structure":[82],"antiparallel":[84],"\u03b2-sheets":[85],"three":[87],"different":[88],"groups":[89],"twist.":[91],"It":[92],"overperforms":[93],"any":[94],"available":[95],"in":[97,152],"accuracy":[98],"content,":[101],"moreover,":[102],"it":[103],"capable":[105],"predicting":[107],"fold":[110],"down":[111],"topology/homology":[114],"level":[115],"CATH":[118],"classification.":[119],"A":[120],"new":[121],"module":[122],"helps":[126],"distinguish":[128],"intrinsically":[129],"disordered":[130],"proteins":[131],"by":[132],"their":[133],"spectrum.":[135],"Secondary":[136],"calculation":[138],"for":[139,168,181],"uploaded":[140],"PDB":[141],"files":[142],"will":[143],"help":[144],"experimental":[146],"verification":[147],"MD":[150],"silico":[153],"modelling":[154],"using":[155],"spectroscopy.":[157],"server":[159,188],"also":[160],"calculates":[161],"extinction":[162],"coefficients":[163],"primary":[166],"sequence":[167],"users":[170],"determine":[172],"concentrations":[176],"a":[179],"prerequisite":[180],"reliable":[182],"determination.":[185],"be":[190],"freely":[191],"accessed":[192],"at":[193],"https://bestsel.elte.hu.":[194]},"counts_by_year":[{"year":2026,"cited_by_count":43},{"year":2025,"cited_by_count":169},{"year":2024,"cited_by_count":130},{"year":2023,"cited_by_count":77},{"year":2022,"cited_by_count":13}],"updated_date":"2026-05-12T08:28:47.272897","created_date":"2025-10-10T00:00:00"}