{"id":"https://openalex.org/W3214546423","doi":"https://doi.org/10.1093/nar/gkab981","title":"CEBS update: curated toxicology database with enhanced tools for data integration","display_name":"CEBS update: curated toxicology database with enhanced tools for data integration","publication_year":2021,"publication_date":"2021-11-01","ids":{"openalex":"https://openalex.org/W3214546423","doi":"https://doi.org/10.1093/nar/gkab981","mag":"3214546423","pmid":"https://pubmed.ncbi.nlm.nih.gov/34751388"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkab981","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkab981","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1093/nar/gkab981","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5069703406","display_name":"Cari Martini","orcid":null},"institutions":[{"id":"https://openalex.org/I121847817","display_name":"The Graduate Center, CUNY","ror":"https://ror.org/00awd9g61","country_code":"US","type":"education","lineage":["https://openalex.org/I121847817"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Cari Martini","raw_affiliation_strings":["ASRC Federal, 430 Davis Dr., Suite 400, Morrisville, NC 27560, USA"],"affiliations":[{"raw_affiliation_string":"ASRC Federal, 430 Davis Dr., Suite 400, Morrisville, NC 27560, USA","institution_ids":["https://openalex.org/I121847817"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075099532","display_name":"Ying Frances Liu","orcid":null},"institutions":[{"id":"https://openalex.org/I121847817","display_name":"The Graduate Center, CUNY","ror":"https://ror.org/00awd9g61","country_code":"US","type":"education","lineage":["https://openalex.org/I121847817"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ying Frances Liu","raw_affiliation_strings":["ASRC Federal, 430 Davis Dr., Suite 400, Morrisville, NC 27560, USA"],"affiliations":[{"raw_affiliation_string":"ASRC Federal, 430 Davis Dr., Suite 400, Morrisville, NC 27560, USA","institution_ids":["https://openalex.org/I121847817"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108483949","display_name":"Hui Gong","orcid":null},"institutions":[{"id":"https://openalex.org/I121847817","display_name":"The Graduate Center, CUNY","ror":"https://ror.org/00awd9g61","country_code":"US","type":"education","lineage":["https://openalex.org/I121847817"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Hui Gong","raw_affiliation_strings":["ASRC Federal, 430 Davis Dr., Suite 400, Morrisville, NC 27560, USA"],"affiliations":[{"raw_affiliation_string":"ASRC Federal, 430 Davis Dr., Suite 400, Morrisville, NC 27560, USA","institution_ids":["https://openalex.org/I121847817"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029821441","display_name":"Nicole Marie Sayers","orcid":null},"institutions":[{"id":"https://openalex.org/I121847817","display_name":"The Graduate Center, CUNY","ror":"https://ror.org/00awd9g61","country_code":"US","type":"education","lineage":["https://openalex.org/I121847817"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Nicole Sayers","raw_affiliation_strings":["ASRC Federal, 430 Davis Dr., Suite 400, Morrisville, NC 27560, USA"],"affiliations":[{"raw_affiliation_string":"ASRC Federal, 430 Davis Dr., Suite 400, Morrisville, NC 27560, USA","institution_ids":["https://openalex.org/I121847817"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020957014","display_name":"G Segura","orcid":null},"institutions":[{"id":"https://openalex.org/I121847817","display_name":"The Graduate Center, CUNY","ror":"https://ror.org/00awd9g61","country_code":"US","type":"education","lineage":["https://openalex.org/I121847817"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"German Segura","raw_affiliation_strings":["ASRC Federal, 430 Davis Dr., Suite 400, Morrisville, NC 27560, USA"],"affiliations":[{"raw_affiliation_string":"ASRC Federal, 430 Davis Dr., Suite 400, Morrisville, NC 27560, USA","institution_ids":["https://openalex.org/I121847817"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5006229200","display_name":"Jennifer Fostel","orcid":"https://orcid.org/0000-0001-5858-4393"},"institutions":[{"id":"https://openalex.org/I4210095140","display_name":"National Institute of Environmental Health Sciences","ror":"https://ror.org/00j4k1h63","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I4210095140"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jennifer Fostel","raw_affiliation_strings":["Division of the National Toxicology Program, National Institute of Environmental Health Sciences, PO Box 12233, Research Triangle Park, NC 27709, USA"],"affiliations":[{"raw_affiliation_string":"Division of the National Toxicology Program, National Institute of Environmental Health Sciences, PO Box 12233, Research Triangle Park, NC 27709, USA","institution_ids":["https://openalex.org/I4210095140"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5069703406"],"corresponding_institution_ids":["https://openalex.org/I121847817"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":1.1016,"has_fulltext":false,"cited_by_count":5,"citation_normalized_percentile":{"value":0.83271999,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"50","issue":"D1","first_page":"D1156","last_page":"D1163"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11937","display_name":"Research Data Management Practices","score":0.9786999821662903,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11937","display_name":"Research Data Management Practices","score":0.9786999821662903,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9757999777793884,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9675999879837036,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/metadata","display_name":"Metadata","score":0.7643741369247437},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6050686240196228},{"id":"https://openalex.org/keywords/identifier","display_name":"Identifier","score":0.6048886179924011},{"id":"https://openalex.org/keywords/unique-identifier","display_name":"Unique identifier","score":0.5263912677764893},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.5169912576675415},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.5152568817138672},{"id":"https://openalex.org/keywords/interface","display_name":"Interface (matter)","score":0.5074166655540466},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.4560219943523407},{"id":"https://openalex.org/keywords/application-programming-interface","display_name":"Application programming interface","score":0.4354096055030823},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.3403736352920532}],"concepts":[{"id":"https://openalex.org/C93518851","wikidata":"https://www.wikidata.org/wiki/Q180160","display_name":"Metadata","level":2,"score":0.7643741369247437},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6050686240196228},{"id":"https://openalex.org/C154504017","wikidata":"https://www.wikidata.org/wiki/Q853614","display_name":"Identifier","level":2,"score":0.6048886179924011},{"id":"https://openalex.org/C119839945","wikidata":"https://www.wikidata.org/wiki/Q6545185","display_name":"Unique identifier","level":3,"score":0.5263912677764893},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.5169912576675415},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.5152568817138672},{"id":"https://openalex.org/C113843644","wikidata":"https://www.wikidata.org/wiki/Q901882","display_name":"Interface (matter)","level":4,"score":0.5074166655540466},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.4560219943523407},{"id":"https://openalex.org/C99613125","wikidata":"https://www.wikidata.org/wiki/Q165194","display_name":"Application programming interface","level":2,"score":0.4354096055030823},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3403736352920532},{"id":"https://openalex.org/C157915830","wikidata":"https://www.wikidata.org/wiki/Q2928001","display_name":"Bubble","level":2,"score":0.0},{"id":"https://openalex.org/C129307140","wikidata":"https://www.wikidata.org/wiki/Q6795880","display_name":"Maximum bubble pressure method","level":3,"score":0.0},{"id":"https://openalex.org/C173608175","wikidata":"https://www.wikidata.org/wiki/Q232661","display_name":"Parallel computing","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014116","descriptor_name":"Toxicology","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D014116","descriptor_name":"Toxicology","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D014116","descriptor_name":"Toxicology","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D043922","descriptor_name":"Toxicogenetics","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D043922","descriptor_name":"Toxicogenetics","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D043922","descriptor_name":"Toxicogenetics","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/nar/gkab981","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkab981","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:34751388","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34751388","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:8728139","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8728139","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkab981","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkab981","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G3779366020","display_name":null,"funder_award_id":"HHSN273201000063U GS06F0629Z","funder_id":"https://openalex.org/F4320337361","funder_display_name":"National Institute of Environmental Health Sciences"},{"id":"https://openalex.org/G4328384731","display_name":null,"funder_award_id":"HHSN31620120054W","funder_id":"https://openalex.org/F4320337361","funder_display_name":"National Institute of Environmental Health Sciences"}],"funders":[{"id":"https://openalex.org/F4320337361","display_name":"National Institute of Environmental Health Sciences","ror":"https://ror.org/00j4k1h63"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":23,"referenced_works":["https://openalex.org/W1537938460","https://openalex.org/W1996202645","https://openalex.org/W2052163559","https://openalex.org/W2098303558","https://openalex.org/W2105230092","https://openalex.org/W2116859994","https://openalex.org/W2132873473","https://openalex.org/W2147671887","https://openalex.org/W2302501749","https://openalex.org/W2403608968","https://openalex.org/W2558649973","https://openalex.org/W2741481767","https://openalex.org/W2769853272","https://openalex.org/W2773787581","https://openalex.org/W2903288588","https://openalex.org/W3024722698","https://openalex.org/W3185571857","https://openalex.org/W4205640701","https://openalex.org/W4237705725","https://openalex.org/W4240934260","https://openalex.org/W4245335223","https://openalex.org/W6677753497","https://openalex.org/W6713634904"],"related_works":["https://openalex.org/W2413568490","https://openalex.org/W1913624564","https://openalex.org/W3130054399","https://openalex.org/W4301062032","https://openalex.org/W2343500026","https://openalex.org/W2319837024","https://openalex.org/W2033159440","https://openalex.org/W2390627310","https://openalex.org/W2413664130","https://openalex.org/W2108699052"],"abstract_inverted_index":{"The":[0,115,151],"Chemical":[1],"Effects":[2],"in":[3],"Biological":[4,109],"Systems":[5],"database":[6],"(CEBS)":[7],"contains":[8],"extensive":[9],"toxicology":[10],"study":[11,166],"results":[12],"and":[13,24,38,73,92,103,110,135,143,169,190,196],"metadata":[14,93],"from":[15,41],"the":[16,19,60,79,121],"Division":[17],"of":[18,27],"National":[20],"Toxicology":[21],"Program":[22],"(NTP)":[23],"other":[25],"studies":[26,45],"environmental":[28,52],"health":[29],"interest.":[30],"This":[31,86],"resource":[32],"grants":[33],"public":[34,80],"access":[35,142],"to":[36,64,76,94,100,106,144,161,165,175,192],"search":[37,126,159],"collate":[39],"data":[40,68,71,74,116,170,188],"over":[42,59],"10":[43],"250":[44],"for":[46,140,148,178],"12":[47],"750":[48],"test":[49,98,180,194],"articles":[50,99,195],"(chemicals,":[51],"agents).":[53],"CEBS":[54,122],"has":[55],"made":[56,118],"considerable":[57],"strides":[58],"last":[61],"5":[62],"years":[63],"integrate":[65],"growing":[66],"internal":[67],"repositories":[69],"into":[70],"warehouses":[72],"marts":[75],"better":[77],"serve":[78],"with":[81,156,182],"high":[82],"quality":[83],"curated":[84],"datasets.":[85],"effort":[87],"includes":[88],"harmonizing":[89],"legacy":[90],"terms":[91,105],"current":[95],"standards,":[96],"mapping":[97],"external":[101],"identifiers,":[102],"aligning":[104],"OBO":[107],"(Open":[108],"Biomedical":[111],"Ontology)":[112],"Foundry":[113],"ontologies.":[114],"are":[117,173],"available":[119,198],"through":[120],"Homepage":[123],"(https://cebs.niehs.nih.gov/cebs/),":[124],"guided":[125],"applications,":[127],"flat":[128],"files":[129],"on":[130],"FTP":[131],"(file":[132],"transfer":[133],"protocol),":[134],"APIs":[136],"(application":[137],"programming":[138],"interface)":[139],"user":[141,152],"provide":[145],"a":[146,157],"bridge":[147],"computational":[149],"tools.":[150],"interface":[153],"is":[154],"intuitive":[155],"single":[158,176],"bar":[160],"query":[162],"keywords":[163],"related":[164,193],"metadata,":[167],"publications,":[168,185],"availability.":[171],"Results":[172],"consolidated":[174],"pages":[177],"each":[179],"article":[181],"NTP":[183],"conclusions,":[184],"individual":[186],"studies,":[187],"collections,":[189],"links":[191],"projects":[197],"together.":[199]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}