{"id":"https://openalex.org/W3197858765","doi":"https://doi.org/10.1093/nar/gkab786","title":"gutMGene: a comprehensive database for target genes of gut microbes and microbial metabolites","display_name":"gutMGene: a comprehensive database for target genes of gut microbes and microbial metabolites","publication_year":2021,"publication_date":"2021-09-08","ids":{"openalex":"https://openalex.org/W3197858765","doi":"https://doi.org/10.1093/nar/gkab786","mag":"3197858765","pmid":"https://pubmed.ncbi.nlm.nih.gov/34500458"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkab786","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkab786","pdf_url":"https://academic.oup.com/nar/article-pdf/50/D1/D795/42057851/gkab786.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/50/D1/D795/42057851/gkab786.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5052382857","display_name":"Liang Cheng","orcid":"https://orcid.org/0000-0002-6665-6710"},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Liang Cheng","raw_affiliation_strings":["College of Bioinformatics Science and Technology, Harbin Medical University, Harbin\u00a0150081, Heilongjiang, China","NHC and CAMS Key Laboratory of Molecular Probe and Targeted Theranostics, Harbin Medical University, Harbin\u00a0150028, Heilongjiang, China"],"affiliations":[{"raw_affiliation_string":"College of Bioinformatics Science and Technology, Harbin Medical University, Harbin\u00a0150081, Heilongjiang, China","institution_ids":["https://openalex.org/I156144747"]},{"raw_affiliation_string":"NHC and CAMS Key Laboratory of Molecular Probe and Targeted Theranostics, Harbin Medical University, Harbin\u00a0150028, Heilongjiang, China","institution_ids":["https://openalex.org/I156144747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051745695","display_name":"Changlu Qi","orcid":null},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Changlu Qi","raw_affiliation_strings":["College of Bioinformatics Science and Technology, Harbin Medical University, Harbin\u00a0150081, Heilongjiang, China"],"affiliations":[{"raw_affiliation_string":"College of Bioinformatics Science and Technology, Harbin Medical University, Harbin\u00a0150081, Heilongjiang, China","institution_ids":["https://openalex.org/I156144747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102890198","display_name":"Haixiu Yang","orcid":"https://orcid.org/0000-0002-7161-1656"},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Haixiu Yang","raw_affiliation_strings":["College of Bioinformatics Science and Technology, Harbin Medical University, Harbin\u00a0150081, Heilongjiang, China"],"affiliations":[{"raw_affiliation_string":"College of Bioinformatics Science and Technology, Harbin Medical University, Harbin\u00a0150081, Heilongjiang, China","institution_ids":["https://openalex.org/I156144747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001803050","display_name":"Minke Lu","orcid":null},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Minke Lu","raw_affiliation_strings":["College of Bioinformatics Science and Technology, Harbin Medical University, Harbin\u00a0150081, Heilongjiang, China"],"affiliations":[{"raw_affiliation_string":"College of Bioinformatics Science and Technology, Harbin Medical University, Harbin\u00a0150081, Heilongjiang, China","institution_ids":["https://openalex.org/I156144747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074062382","display_name":"Yiting Cai","orcid":"https://orcid.org/0000-0001-6295-6989"},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yiting Cai","raw_affiliation_strings":["College of Bioinformatics Science and Technology, Harbin Medical University, Harbin\u00a0150081, Heilongjiang, China"],"affiliations":[{"raw_affiliation_string":"College of Bioinformatics Science and Technology, Harbin Medical University, Harbin\u00a0150081, Heilongjiang, China","institution_ids":["https://openalex.org/I156144747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085098553","display_name":"Tongze Fu","orcid":null},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Tongze Fu","raw_affiliation_strings":["College of Bioinformatics Science and Technology, Harbin Medical University, Harbin\u00a0150081, Heilongjiang, China"],"affiliations":[{"raw_affiliation_string":"College of Bioinformatics Science and Technology, Harbin Medical University, Harbin\u00a0150081, Heilongjiang, China","institution_ids":["https://openalex.org/I156144747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066759303","display_name":"Jialiang Ren","orcid":null},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jialiang Ren","raw_affiliation_strings":["College of Bioinformatics Science and Technology, Harbin Medical University, Harbin\u00a0150081, Heilongjiang, China"],"affiliations":[{"raw_affiliation_string":"College of Bioinformatics Science and Technology, Harbin Medical University, Harbin\u00a0150081, Heilongjiang, China","institution_ids":["https://openalex.org/I156144747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027495315","display_name":"Qu Jin","orcid":null},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qu Jin","raw_affiliation_strings":["College of Bioinformatics Science and Technology, Harbin Medical University, Harbin\u00a0150081, Heilongjiang, China"],"affiliations":[{"raw_affiliation_string":"College of Bioinformatics Science and Technology, Harbin Medical University, Harbin\u00a0150081, Heilongjiang, China","institution_ids":["https://openalex.org/I156144747"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100445886","display_name":"Xue Zhang","orcid":"https://orcid.org/0009-0004-0249-0581"},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]},{"id":"https://openalex.org/I200296433","display_name":"Chinese Academy of Medical Sciences & Peking Union Medical College","ror":"https://ror.org/02drdmm93","country_code":"CN","type":"education","lineage":["https://openalex.org/I200296433"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Xue Zhang","raw_affiliation_strings":["McKusick\u2013Zhang Center for Genetic Medicine,\u00a0Peking Union Medical College, Beijing\u00a0100005, China","NHC and CAMS Key Laboratory of Molecular Probe and Targeted Theranostics, Harbin Medical University, Harbin\u00a0150028, Heilongjiang, China"],"affiliations":[{"raw_affiliation_string":"McKusick\u2013Zhang Center for Genetic Medicine,\u00a0Peking Union Medical College, Beijing\u00a0100005, China","institution_ids":["https://openalex.org/I200296433"]},{"raw_affiliation_string":"NHC and CAMS Key Laboratory of Molecular Probe and Targeted Theranostics, Harbin Medical University, Harbin\u00a0150028, Heilongjiang, China","institution_ids":["https://openalex.org/I156144747"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":9,"corresponding_author_ids":["https://openalex.org/A5052382857","https://openalex.org/A5100445886"],"corresponding_institution_ids":["https://openalex.org/I156144747","https://openalex.org/I200296433"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":9.7598,"has_fulltext":false,"cited_by_count":165,"citation_normalized_percentile":{"value":0.98968106,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":98,"max":100},"biblio":{"volume":"50","issue":"D1","first_page":"D795","last_page":"D800"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10066","display_name":"Gut microbiota and health","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10066","display_name":"Gut microbiota and health","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12267","display_name":"Diet and metabolism studies","score":0.9916999936103821,"subfield":{"id":"https://openalex.org/subfields/2737","display_name":"Physiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.9280811548233032},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.5341445803642273},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.46006858348846436},{"id":"https://openalex.org/keywords/bacteria","display_name":"Bacteria","score":0.4513690173625946},{"id":"https://openalex.org/keywords/microbial-metabolism","display_name":"Microbial metabolism","score":0.4505227506160736},{"id":"https://openalex.org/keywords/microbiology","display_name":"Microbiology","score":0.4167020916938782},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.3859517574310303}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.9280811548233032},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.5341445803642273},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.46006858348846436},{"id":"https://openalex.org/C523546767","wikidata":"https://www.wikidata.org/wiki/Q10876","display_name":"Bacteria","level":2,"score":0.4513690173625946},{"id":"https://openalex.org/C101014631","wikidata":"https://www.wikidata.org/wiki/Q4889568","display_name":"Microbial metabolism","level":3,"score":0.4505227506160736},{"id":"https://openalex.org/C89423630","wikidata":"https://www.wikidata.org/wiki/Q7193","display_name":"Microbiology","level":1,"score":0.4167020916938782},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.3859517574310303}],"mesh":[{"descriptor_ui":"D000069196","descriptor_name":"Gastrointestinal Microbiome","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000069196","descriptor_name":"Gastrointestinal Microbiome","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000069196","descriptor_name":"Gastrointestinal Microbiome","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D005243","descriptor_name":"Feces","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":false},{"descriptor_ui":"D005243","descriptor_name":"Feces","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":false},{"descriptor_ui":"D005243","descriptor_name":"Feces","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012336","descriptor_name":"RNA, Ribosomal, 16S","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012336","descriptor_name":"RNA, Ribosomal, 16S","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012336","descriptor_name":"RNA, Ribosomal, 16S","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D054892","descriptor_name":"Metagenome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D054892","descriptor_name":"Metagenome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D054892","descriptor_name":"Metagenome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055442","descriptor_name":"Metabolome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055442","descriptor_name":"Metabolome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055442","descriptor_name":"Metabolome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064307","descriptor_name":"Microbiota","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D064307","descriptor_name":"Microbiota","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D064307","descriptor_name":"Microbiota","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/nar/gkab786","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkab786","pdf_url":"https://academic.oup.com/nar/article-pdf/50/D1/D795/42057851/gkab786.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:34500458","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34500458","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:8728193","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8728193","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkab786","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkab786","pdf_url":"https://academic.oup.com/nar/article-pdf/50/D1/D795/42057851/gkab786.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G724259906","display_name":null,"funder_award_id":"61871160","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G8122999026","display_name":null,"funder_award_id":"62172130","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3197858765.pdf","grobid_xml":"https://content.openalex.org/works/W3197858765.grobid-xml"},"referenced_works_count":26,"referenced_works":["https://openalex.org/W1935434993","https://openalex.org/W1990590570","https://openalex.org/W2003753078","https://openalex.org/W2134241357","https://openalex.org/W2155897723","https://openalex.org/W2168842536","https://openalex.org/W2188593832","https://openalex.org/W2339765445","https://openalex.org/W2568352511","https://openalex.org/W2568502991","https://openalex.org/W2575481614","https://openalex.org/W2616825195","https://openalex.org/W2625068954","https://openalex.org/W2767683865","https://openalex.org/W2952564192","https://openalex.org/W2970130570","https://openalex.org/W2972246166","https://openalex.org/W2979072963","https://openalex.org/W2983848832","https://openalex.org/W3031760450","https://openalex.org/W3037559613","https://openalex.org/W3048090444","https://openalex.org/W3097145107","https://openalex.org/W3126331691","https://openalex.org/W3145834862","https://openalex.org/W4255502791"],"related_works":["https://openalex.org/W2050457088","https://openalex.org/W2354441856","https://openalex.org/W4327971719","https://openalex.org/W1520405092","https://openalex.org/W4322697220","https://openalex.org/W3121629815","https://openalex.org/W3091622732","https://openalex.org/W2147136504","https://openalex.org/W2022057667","https://openalex.org/W3148024230"],"abstract_inverted_index":{"gutMGene":[0,100,137,167],"(http://bio-annotation.cn/gutmgene),":[1],"a":[2,9,142,152,169],"manually":[3],"curated":[4,103,119],"database,":[5],"aims":[6],"at":[7],"providing":[8],"comprehensive":[10],"resource":[11],"of":[12,15,27,45,48,58,69,99,155],"target":[13,150],"genes":[14,37,114,130],"gut":[16,49,79,107,123,145,179],"microbes":[17],"and":[18,23,112,117,128,149,160,164,174,182,195],"microbial":[19,36,110,126,147],"metabolites":[20,70,111,127],"in":[21,72,115,131,135],"humans":[22],"mice.":[24,132],"Metagenomic":[25],"sequencing":[26],"fecal":[28],"samples":[29],"has":[30,64],"identified":[31],"3.3":[32],"\u00d7":[33],"106":[34],"non-redundant":[35],"from":[38,77],"up":[39],"to":[40,51,172,190],"1500":[41],"different":[42],"species.":[43],"One":[44],"the":[46,55,78,88,136,156,188,193],"contributions":[47],"microbiota":[50],"host":[52,89],"biology":[53],"is":[54],"circulating":[56],"pool":[57],"bacterially":[59],"derived":[60,76],"small-molecule":[61],"metabolites.":[62],"It":[63,185],"been":[65],"estimated":[66],"that":[67],"10%":[68],"found":[71],"mammalian":[73],"blood":[74],"are":[75],"microbiota,":[80],"where":[81],"they":[82],"can":[83],"produce":[84],"systemic":[85],"effects":[86],"on":[87,141],"through":[90],"activating":[91],"or":[92],"inhibiting":[93],"gene":[94],"expression.":[95],"The":[96],"current":[97],"version":[98],"documents":[101],"1331":[102],"relationships":[104,120],"between":[105,121,144],"332":[106],"microbes,":[108,124,180],"207":[109],"223":[113],"humans,":[116],"2349":[118],"209":[122],"149":[125],"544":[129],"Each":[133],"entry":[134,177],"contains":[138],"detailed":[139],"information":[140],"relationship":[143],"microbe,":[146],"metabolite":[148],"gene,":[151],"brief":[153],"description":[154],"relationship,":[157],"experiment":[158],"technology":[159],"platform,":[161],"literature":[162],"reference":[163],"so":[165],"on.":[166],"provides":[168],"user-friendly":[170],"interface":[171],"browse":[173],"retrieve":[175],"each":[176],"using":[178],"disorders":[181],"intervention":[183],"measures.":[184],"also":[186],"offers":[187],"option":[189],"download":[191],"all":[192],"entries":[194],"submit":[196],"new":[197],"experimentally":[198],"validated":[199],"associations.":[200]},"counts_by_year":[{"year":2026,"cited_by_count":7},{"year":2025,"cited_by_count":41},{"year":2024,"cited_by_count":52},{"year":2023,"cited_by_count":30},{"year":2022,"cited_by_count":28},{"year":2021,"cited_by_count":6}],"updated_date":"2026-04-14T08:04:32.555800","created_date":"2025-10-10T00:00:00"}
