{"id":"https://openalex.org/W3165022492","doi":"https://doi.org/10.1093/nar/gkab421","title":"CPA: a web-based platform for consensus pathway analysis and interactive visualization","display_name":"CPA: a web-based platform for consensus pathway analysis and interactive visualization","publication_year":2021,"publication_date":"2021-05-05","ids":{"openalex":"https://openalex.org/W3165022492","doi":"https://doi.org/10.1093/nar/gkab421","mag":"3165022492","pmid":"https://pubmed.ncbi.nlm.nih.gov/34037798"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkab421","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkab421","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1093/nar/gkab421","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101704793","display_name":"Hung Nguyen","orcid":"https://orcid.org/0009-0000-8256-427X"},"institutions":[{"id":"https://openalex.org/I134113660","display_name":"University of Nevada, Reno","ror":"https://ror.org/01keh0577","country_code":"US","type":"education","lineage":["https://openalex.org/I134113660"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Hung Nguyen","raw_affiliation_strings":["University of Nevada Reno, Department of Computer Science and Engineering, Reno, NV 89557, USA"],"affiliations":[{"raw_affiliation_string":"University of Nevada Reno, Department of Computer Science and Engineering, Reno, NV 89557, USA","institution_ids":["https://openalex.org/I134113660"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101503290","display_name":"Duc Tran","orcid":"https://orcid.org/0000-0003-2918-8601"},"institutions":[{"id":"https://openalex.org/I134113660","display_name":"University of Nevada, Reno","ror":"https://ror.org/01keh0577","country_code":"US","type":"education","lineage":["https://openalex.org/I134113660"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Duc Tran","raw_affiliation_strings":["University of Nevada Reno, Department of Computer Science and Engineering, Reno, NV 89557, USA"],"affiliations":[{"raw_affiliation_string":"University of Nevada Reno, Department of Computer Science and Engineering, Reno, NV 89557, USA","institution_ids":["https://openalex.org/I134113660"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5035403159","display_name":"Jonathan M. Galazka","orcid":"https://orcid.org/0000-0002-4153-0249"},"institutions":[{"id":"https://openalex.org/I1280536761","display_name":"Ames Research Center","ror":"https://ror.org/02acart68","country_code":"US","type":"facility","lineage":["https://openalex.org/I1280536761","https://openalex.org/I4210124779"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jonathan M Galazka","raw_affiliation_strings":["NASA Ames Research Center, Space Biosciences Division, Moffett Field, CA 94035, USA"],"affiliations":[{"raw_affiliation_string":"NASA Ames Research Center, Space Biosciences Division, Moffett Field, CA 94035, USA","institution_ids":["https://openalex.org/I1280536761"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076358770","display_name":"Sylvain V. Costes","orcid":"https://orcid.org/0000-0002-8542-2389"},"institutions":[{"id":"https://openalex.org/I1280536761","display_name":"Ames Research Center","ror":"https://ror.org/02acart68","country_code":"US","type":"facility","lineage":["https://openalex.org/I1280536761","https://openalex.org/I4210124779"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sylvain V Costes","raw_affiliation_strings":["NASA Ames Research Center, Space Biosciences Division, Moffett Field, CA 94035, USA"],"affiliations":[{"raw_affiliation_string":"NASA Ames Research Center, Space Biosciences Division, Moffett Field, CA 94035, USA","institution_ids":["https://openalex.org/I1280536761"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077595545","display_name":"Afshin Beheshti","orcid":"https://orcid.org/0000-0003-4643-531X"},"institutions":[{"id":"https://openalex.org/I1280536761","display_name":"Ames Research Center","ror":"https://ror.org/02acart68","country_code":"US","type":"facility","lineage":["https://openalex.org/I1280536761","https://openalex.org/I4210124779"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Afshin Beheshti","raw_affiliation_strings":["KBR, NASA Ames Research Center, Space Biosciences Division, Moffett Field, CA 94035, USA"],"affiliations":[{"raw_affiliation_string":"KBR, NASA Ames Research Center, Space Biosciences Division, Moffett Field, CA 94035, USA","institution_ids":["https://openalex.org/I1280536761"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057906211","display_name":"Juli Petereit","orcid":"https://orcid.org/0000-0002-8017-3280"},"institutions":[{"id":"https://openalex.org/I134113660","display_name":"University of Nevada, Reno","ror":"https://ror.org/01keh0577","country_code":"US","type":"education","lineage":["https://openalex.org/I134113660"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Juli Petereit","raw_affiliation_strings":["University of Nevada Reno, Nevada Bioinformatics Center, Reno, NV 89557, USA"],"affiliations":[{"raw_affiliation_string":"University of Nevada Reno, Nevada Bioinformatics Center, Reno, NV 89557, USA","institution_ids":["https://openalex.org/I134113660"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006190733","display_name":"Sorin Dr\u0103ghici","orcid":"https://orcid.org/0000-0002-0786-8377"},"institutions":[{"id":"https://openalex.org/I185443292","display_name":"Wayne State University","ror":"https://ror.org/01070mq45","country_code":"US","type":"education","lineage":["https://openalex.org/I185443292"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sorin Draghici","raw_affiliation_strings":["Wayne State University, Department of Computer Science, Detroit, MI 48202, USA"],"affiliations":[{"raw_affiliation_string":"Wayne State University, Department of Computer Science, Detroit, MI 48202, USA","institution_ids":["https://openalex.org/I185443292"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5018043372","display_name":"Tin Nguyen","orcid":"https://orcid.org/0000-0001-8001-9470"},"institutions":[{"id":"https://openalex.org/I134113660","display_name":"University of Nevada, Reno","ror":"https://ror.org/01keh0577","country_code":"US","type":"education","lineage":["https://openalex.org/I134113660"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Tin Nguyen","raw_affiliation_strings":["University of Nevada Reno, Department of Computer Science and Engineering, Reno, NV 89557, USA"],"affiliations":[{"raw_affiliation_string":"University of Nevada Reno, Department of Computer Science and Engineering, Reno, NV 89557, USA","institution_ids":["https://openalex.org/I134113660"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5018043372"],"corresponding_institution_ids":["https://openalex.org/I134113660"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":2.1911,"has_fulltext":false,"cited_by_count":37,"citation_normalized_percentile":{"value":0.88631799,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":97,"max":99},"biblio":{"volume":"49","issue":"W1","first_page":"W114","last_page":"W124"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9904999732971191,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T13127","display_name":"Biotin and Related Studies","score":0.9825999736785889,"subfield":{"id":"https://openalex.org/subfields/1307","display_name":"Cell Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/kegg","display_name":"KEGG","score":0.7569475769996643},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.7408537864685059},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.5852463245391846},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.548285186290741},{"id":"https://openalex.org/keywords/gene-ontology","display_name":"Gene ontology","score":0.4990105628967285},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.44821423292160034},{"id":"https://openalex.org/keywords/web-application","display_name":"Web application","score":0.44254356622695923},{"id":"https://openalex.org/keywords/systems-biology","display_name":"Systems biology","score":0.4380183517932892},{"id":"https://openalex.org/keywords/pathway-analysis","display_name":"Pathway analysis","score":0.42181161046028137},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.39858657121658325},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.34549659490585327},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.3243100047111511},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3213270902633667},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.29648256301879883},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.2162068486213684},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.11436846852302551}],"concepts":[{"id":"https://openalex.org/C152724338","wikidata":"https://www.wikidata.org/wiki/Q909442","display_name":"KEGG","level":5,"score":0.7569475769996643},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7408537864685059},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.5852463245391846},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.548285186290741},{"id":"https://openalex.org/C2987395477","wikidata":"https://www.wikidata.org/wiki/Q135085","display_name":"Gene ontology","level":4,"score":0.4990105628967285},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.44821423292160034},{"id":"https://openalex.org/C118643609","wikidata":"https://www.wikidata.org/wiki/Q189210","display_name":"Web application","level":2,"score":0.44254356622695923},{"id":"https://openalex.org/C152662350","wikidata":"https://www.wikidata.org/wiki/Q815297","display_name":"Systems biology","level":2,"score":0.4380183517932892},{"id":"https://openalex.org/C2779230013","wikidata":"https://www.wikidata.org/wiki/Q25303877","display_name":"Pathway analysis","level":4,"score":0.42181161046028137},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.39858657121658325},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.34549659490585327},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3243100047111511},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3213270902633667},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.29648256301879883},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.2162068486213684},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.11436846852302551},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000544","descriptor_name":"Alzheimer Disease","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000544","descriptor_name":"Alzheimer Disease","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000544","descriptor_name":"Alzheimer Disease","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000544","descriptor_name":"Alzheimer Disease","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015870","descriptor_name":"Gene Expression","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015870","descriptor_name":"Gene Expression","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015870","descriptor_name":"Gene Expression","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015870","descriptor_name":"Gene Expression","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D063990","descriptor_name":"Gene Ontology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D063990","descriptor_name":"Gene Ontology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D063990","descriptor_name":"Gene Ontology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D063990","descriptor_name":"Gene Ontology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D066264","descriptor_name":"Datasets as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D066264","descriptor_name":"Datasets as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D066264","descriptor_name":"Datasets as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D066264","descriptor_name":"Datasets as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/nar/gkab421","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkab421","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:34037798","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34037798","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:8262702","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8262702","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkab421","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkab421","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1529568653","display_name":null,"funder_award_id":"5 U54 GM104944","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G2250883387","display_name":null,"funder_award_id":"2001385","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G3863681989","display_name":null,"funder_award_id":"2029572","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G6405410461","display_name":null,"funder_award_id":"2019609","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G7571187106","display_name":null,"funder_award_id":"GM103440","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G8997712407","display_name":null,"funder_award_id":"80NSSC19M0170","funder_id":"https://openalex.org/F4320306101","funder_display_name":"National Aeronautics and Space Administration"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320306101","display_name":"National Aeronautics and Space Administration","ror":"https://ror.org/027ka1x80"},{"id":"https://openalex.org/F4320337354","display_name":"National Institute of General Medical Sciences","ror":"https://ror.org/04q48ey07"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":69,"referenced_works":["https://openalex.org/W1533179050","https://openalex.org/W1535641839","https://openalex.org/W1940759671","https://openalex.org/W1978230112","https://openalex.org/W1989277387","https://openalex.org/W1998902445","https://openalex.org/W2020859582","https://openalex.org/W2022261649","https://openalex.org/W2035680235","https://openalex.org/W2054892633","https://openalex.org/W2057197718","https://openalex.org/W2072378785","https://openalex.org/W2082081674","https://openalex.org/W2086211531","https://openalex.org/W2096918186","https://openalex.org/W2100239923","https://openalex.org/W2102992354","https://openalex.org/W2103017472","https://openalex.org/W2105022693","https://openalex.org/W2105734437","https://openalex.org/W2107600848","https://openalex.org/W2108096229","https://openalex.org/W2109912704","https://openalex.org/W2110065044","https://openalex.org/W2110350344","https://openalex.org/W2110687686","https://openalex.org/W2114926230","https://openalex.org/W2118258530","https://openalex.org/W2122683221","https://openalex.org/W2124388496","https://openalex.org/W2125943945","https://openalex.org/W2127938920","https://openalex.org/W2129099812","https://openalex.org/W2130410032","https://openalex.org/W2138133187","https://openalex.org/W2146026944","https://openalex.org/W2153032620","https://openalex.org/W2154972152","https://openalex.org/W2155158051","https://openalex.org/W2155330008","https://openalex.org/W2158217645","https://openalex.org/W2159482845","https://openalex.org/W2242206668","https://openalex.org/W2255394077","https://openalex.org/W2345356016","https://openalex.org/W2354350348","https://openalex.org/W2472544934","https://openalex.org/W2531181314","https://openalex.org/W2559588208","https://openalex.org/W2591513009","https://openalex.org/W2610433883","https://openalex.org/W2796586233","https://openalex.org/W2944545583","https://openalex.org/W2946173685","https://openalex.org/W2952143471","https://openalex.org/W2979832776","https://openalex.org/W2980904816","https://openalex.org/W3022255685","https://openalex.org/W3099862724","https://openalex.org/W3112600195","https://openalex.org/W4231254854","https://openalex.org/W4232903880","https://openalex.org/W4247759744","https://openalex.org/W4252684946","https://openalex.org/W4294216483","https://openalex.org/W4300944962","https://openalex.org/W6720512875","https://openalex.org/W6785161123","https://openalex.org/W6813094581"],"related_works":["https://openalex.org/W2551839783","https://openalex.org/W4386401670","https://openalex.org/W2956207900","https://openalex.org/W2790781282","https://openalex.org/W2334025507","https://openalex.org/W4313887725","https://openalex.org/W1778138535","https://openalex.org/W1970486251","https://openalex.org/W4296124993","https://openalex.org/W4229451835"],"abstract_inverted_index":{"In":[0],"molecular":[1],"biology":[2],"and":[3,16,117,129,135,140,158,161,188,191],"genetics,":[4],"there":[5],"is":[6,29,193],"a":[7,69,84,150],"large":[8],"gap":[9,28],"between":[10,138],"the":[11,30,42,63,73,122,126,181],"ease":[12],"of":[13,44,72,111,147,152,183],"data":[14,67,172],"collection":[15],"our":[17],"ability":[18],"to":[19,26,61,90,119,170],"extract":[20],"knowledge":[21],"from":[22,173],"these":[23],"data.":[24],"Contributing":[25],"this":[27],"fact":[31],"that":[32,87],"living":[33],"organisms":[34,185],"are":[35,41],"complex":[36,46],"systems":[37],"whose":[38],"emerging":[39],"phenotypes":[40],"results":[43],"multiple":[45,112,184],"interactions":[47],"taking":[48],"place":[49],"on":[50],"various":[51],"pathways.":[52],"This":[53],"demands":[54],"powerful":[55],"yet":[56],"user-friendly":[57],"pathway":[58,93],"analysis":[59,94,182],"tools":[60],"translate":[62],"now":[64],"abundant":[65],"high-throughput":[66],"into":[68],"better":[70],"understanding":[71],"underlying":[74,125],"biological":[75],"phenomena.":[76],"Here":[77],"we":[78],"introduce":[79],"Consensus":[80],"Pathway":[81],"Analysis":[82],"(CPA),":[83],"web-based":[85],"platform":[86,143,178],"allows":[88,168],"researchers":[89],"(i)":[91,149],"perform":[92,109],"using":[95,186],"eight":[96],"established":[97],"methods":[98,116],"(GSEA,":[99],"GSA,":[100],"FGSEA,":[101],"PADOG,":[102],"Impact":[103],"Analysis,":[104],"ORA/Webgestalt,":[105],"KS-test,":[106],"Wilcox-test),":[107],"(ii)":[108,156],"meta-analysis":[110],"datasets,":[113],"(iii)":[114,162],"combine":[115],"datasets":[118],"accurately":[120],"identify":[121],"impacted":[123,133],"pathways":[124,139],"studied":[127],"condition":[128],"(iv)":[130],"interactively":[131],"explore":[132],"pathways,":[134],"browse":[136],"relationships":[137],"genes.":[141],"The":[142,176],"supports":[144,180],"three":[145],"types":[146],"input:":[148],"list":[151],"differentially":[153],"expressed":[154],"genes,":[155],"genes":[157],"fold":[159],"changes":[160],"an":[163],"expression":[164],"matrix.":[165],"It":[166],"also":[167],"users":[169],"import":[171],"NCBI":[174],"GEO.":[175],"CPA":[177],"currently":[179],"KEGG":[187],"Gene":[189],"Ontology,":[190],"it":[192],"freely":[194],"available":[195],"at":[196],"http://cpa.tinnguyen-lab.com.":[197]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":8},{"year":2024,"cited_by_count":7},{"year":2023,"cited_by_count":6},{"year":2022,"cited_by_count":10},{"year":2021,"cited_by_count":4}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}
