{"id":"https://openalex.org/W3154755494","doi":"https://doi.org/10.1093/nar/gkab278","title":"Arena3Dweb: interactive 3D visualization of multilayered networks","display_name":"Arena3Dweb: interactive 3D visualization of multilayered networks","publication_year":2021,"publication_date":"2021-04-08","ids":{"openalex":"https://openalex.org/W3154755494","doi":"https://doi.org/10.1093/nar/gkab278","mag":"3154755494","pmid":"https://pubmed.ncbi.nlm.nih.gov/33885790"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkab278","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkab278","pdf_url":"https://academic.oup.com/nar/article-pdf/49/W1/W36/38841765/gkab278.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/49/W1/W36/38841765/gkab278.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5039988707","display_name":"Evangelos Karatzas","orcid":"https://orcid.org/0000-0001-9132-8981"},"institutions":[{"id":"https://openalex.org/I6820528","display_name":"Alexander Fleming Biomedical Sciences Research Center","ror":"https://ror.org/013x0ky90","country_code":"GR","type":"facility","lineage":["https://openalex.org/I6820528"]}],"countries":["GR"],"is_corresponding":true,"raw_author_name":"Evangelos Karatzas","raw_affiliation_strings":["Institute for Fundamental Biomedical Research, BSRC \u201cAlexander Fleming\u201d, Vari, Greece","Institute for Fundamental Biomedical Research, BSRC \"Alexander Fleming\", Vari, Greece"],"affiliations":[{"raw_affiliation_string":"Institute for Fundamental Biomedical Research, BSRC \u201cAlexander Fleming\u201d, Vari, Greece","institution_ids":["https://openalex.org/I6820528"]},{"raw_affiliation_string":"Institute for Fundamental Biomedical Research, BSRC \"Alexander Fleming\", Vari, Greece","institution_ids":["https://openalex.org/I6820528"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038035082","display_name":"Fotis A. Baltoumas","orcid":"https://orcid.org/0000-0002-2870-2931"},"institutions":[{"id":"https://openalex.org/I6820528","display_name":"Alexander Fleming Biomedical Sciences Research Center","ror":"https://ror.org/013x0ky90","country_code":"GR","type":"facility","lineage":["https://openalex.org/I6820528"]}],"countries":["GR"],"is_corresponding":false,"raw_author_name":"Fotis A Baltoumas","raw_affiliation_strings":["Institute for Fundamental Biomedical Research, BSRC \u201cAlexander Fleming\u201d, Vari, Greece","Institute for Fundamental Biomedical Research, BSRC \"Alexander Fleming\", Vari, Greece"],"affiliations":[{"raw_affiliation_string":"Institute for Fundamental Biomedical Research, BSRC \u201cAlexander Fleming\u201d, Vari, Greece","institution_ids":["https://openalex.org/I6820528"]},{"raw_affiliation_string":"Institute for Fundamental Biomedical Research, BSRC \"Alexander Fleming\", Vari, Greece","institution_ids":["https://openalex.org/I6820528"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003683010","display_name":"Nikolaos A. Panayiotou","orcid":"https://orcid.org/0000-0002-0603-0302"},"institutions":[{"id":"https://openalex.org/I174458059","display_name":"National Technical University of Athens","ror":"https://ror.org/03cx6bg69","country_code":"GR","type":"education","lineage":["https://openalex.org/I174458059"]}],"countries":["GR"],"is_corresponding":false,"raw_author_name":"Nikolaos A Panayiotou","raw_affiliation_strings":["School of Mechanical Engineering, Section of Industrial Management and Operational Research, National Technical University of Athens, Zografou, Athens, Greece"],"affiliations":[{"raw_affiliation_string":"School of Mechanical Engineering, Section of Industrial Management and Operational Research, National Technical University of Athens, Zografou, Athens, Greece","institution_ids":["https://openalex.org/I174458059"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079833473","display_name":"Reinhard Schneider","orcid":"https://orcid.org/0000-0002-8278-1618"},"institutions":[{"id":"https://openalex.org/I186903577","display_name":"University of Luxembourg","ror":"https://ror.org/036x5ad56","country_code":"LU","type":"education","lineage":["https://openalex.org/I186903577"]}],"countries":["LU"],"is_corresponding":false,"raw_author_name":"Reinhard Schneider","raw_affiliation_strings":["University of Luxembourg, Luxembourg Centre for Systems Biomedicine, Bioinformatics Core, Esch-sur-Alzette, Luxembourg"],"affiliations":[{"raw_affiliation_string":"University of Luxembourg, Luxembourg Centre for Systems Biomedicine, Bioinformatics Core, Esch-sur-Alzette, Luxembourg","institution_ids":["https://openalex.org/I186903577"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5088991393","display_name":"Georgios A. Pavlopoulos","orcid":"https://orcid.org/0000-0002-4577-8276"},"institutions":[{"id":"https://openalex.org/I6820528","display_name":"Alexander Fleming Biomedical Sciences Research Center","ror":"https://ror.org/013x0ky90","country_code":"GR","type":"facility","lineage":["https://openalex.org/I6820528"]}],"countries":["GR"],"is_corresponding":true,"raw_author_name":"Georgios A Pavlopoulos","raw_affiliation_strings":["Institute for Fundamental Biomedical Research, BSRC \u201cAlexander Fleming\u201d, Vari, Greece","Institute for Fundamental Biomedical Research, BSRC \"Alexander Fleming\", Vari, Greece"],"affiliations":[{"raw_affiliation_string":"Institute for Fundamental Biomedical Research, BSRC \u201cAlexander Fleming\u201d, Vari, Greece","institution_ids":["https://openalex.org/I6820528"]},{"raw_affiliation_string":"Institute for Fundamental Biomedical Research, BSRC \"Alexander Fleming\", Vari, Greece","institution_ids":["https://openalex.org/I6820528"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5039988707","https://openalex.org/A5088991393"],"corresponding_institution_ids":["https://openalex.org/I6820528"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":2.7189,"has_fulltext":true,"cited_by_count":31,"citation_normalized_percentile":{"value":0.91792046,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":95,"max":99},"biblio":{"volume":"49","issue":"W1","first_page":"W36","last_page":"W45"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10799","display_name":"Data Visualization and Analytics","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10799","display_name":"Data Visualization and Analytics","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12720","display_name":"Multimedia Communication and Technology","score":0.9894999861717224,"subfield":{"id":"https://openalex.org/subfields/3312","display_name":"Sociology and Political Science"},"field":{"id":"https://openalex.org/fields/33","display_name":"Social Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T10064","display_name":"Complex Network Analysis Techniques","score":0.9786999821662903,"subfield":{"id":"https://openalex.org/subfields/3109","display_name":"Statistical and Nonlinear Physics"},"field":{"id":"https://openalex.org/fields/31","display_name":"Physics and Astronomy"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.9259976744651794},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.6039263606071472},{"id":"https://openalex.org/keywords/interactive-visualization","display_name":"Interactive visualization","score":0.5369951725006104},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.46453529596328735},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.13852539658546448},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.1329362690448761}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.9259976744651794},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.6039263606071472},{"id":"https://openalex.org/C64073096","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Interactive visualization","level":3,"score":0.5369951725006104},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.46453529596328735},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.13852539658546448},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.1329362690448761}],"mesh":[{"descriptor_ui":"D000078326","descriptor_name":"Data Visualization","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000078326","descriptor_name":"Data Visualization","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000078326","descriptor_name":"Data Visualization","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D000093485","descriptor_name":"COVID-19 Drug Treatment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000093485","descriptor_name":"COVID-19 Drug Treatment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000093485","descriptor_name":"COVID-19 Drug Treatment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003116","descriptor_name":"Color","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003116","descriptor_name":"Color","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003116","descriptor_name":"Color","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008545","descriptor_name":"Melanoma","qualifier_ui":"Q000188","qualifier_name":"drug therapy","is_major_topic":false},{"descriptor_ui":"D008545","descriptor_name":"Melanoma","qualifier_ui":"Q000188","qualifier_name":"drug therapy","is_major_topic":false},{"descriptor_ui":"D008545","descriptor_name":"Melanoma","qualifier_ui":"Q000188","qualifier_name":"drug therapy","is_major_topic":false},{"descriptor_ui":"D008545","descriptor_name":"Melanoma","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D008545","descriptor_name":"Melanoma","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D008545","descriptor_name":"Melanoma","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015398","descriptor_name":"Signal Transduction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015398","descriptor_name":"Signal Transduction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015398","descriptor_name":"Signal Transduction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017466","descriptor_name":"Receptors, Endothelin","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D017466","descriptor_name":"Receptors, Endothelin","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D017466","descriptor_name":"Receptors, Endothelin","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058492","descriptor_name":"Drug Repositioning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058492","descriptor_name":"Drug Repositioning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058492","descriptor_name":"Drug Repositioning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D060066","descriptor_name":"Protein Interaction Maps","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D060066","descriptor_name":"Protein Interaction Maps","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D060066","descriptor_name":"Protein Interaction Maps","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":5,"locations":[{"id":"doi:10.1093/nar/gkab278","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkab278","pdf_url":"https://academic.oup.com/nar/article-pdf/49/W1/W36/38841765/gkab278.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:33885790","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/33885790","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:8128064","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8128064","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"},{"id":"pmh:ark:/13030/qt94g4r40k","is_oa":false,"landing_page_url":null,"pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":null},{"id":"pmh:oai:escholarship.org:ark:/13030/qt94g4r40k","is_oa":true,"landing_page_url":"https://escholarship.org/uc/item/94g4r40k","pdf_url":null,"source":{"id":"https://openalex.org/S4306400115","display_name":"eScholarship (California Digital Library)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I2801248553","host_organization_name":"California Digital Library","host_organization_lineage":["https://openalex.org/I2801248553"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Research, vol 49, iss W1","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1093/nar/gkab278","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkab278","pdf_url":"https://academic.oup.com/nar/article-pdf/49/W1/W36/38841765/gkab278.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G8707089225","display_name":null,"funder_award_id":"1855-BOLOGNA","funder_id":"https://openalex.org/F4320327859","funder_display_name":"Hellenic Foundation for Research and Innovation"}],"funders":[{"id":"https://openalex.org/F4320327859","display_name":"Hellenic Foundation for Research and Innovation","ror":null}],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3154755494.pdf"},"referenced_works_count":64,"referenced_works":["https://openalex.org/W229097380","https://openalex.org/W1527927437","https://openalex.org/W1529524149","https://openalex.org/W1971471239","https://openalex.org/W1988097700","https://openalex.org/W1991129284","https://openalex.org/W2010099799","https://openalex.org/W2010457001","https://openalex.org/W2017771787","https://openalex.org/W2020359290","https://openalex.org/W2021053884","https://openalex.org/W2023098599","https://openalex.org/W2026493203","https://openalex.org/W2030090912","https://openalex.org/W2040828315","https://openalex.org/W2043570667","https://openalex.org/W2044775506","https://openalex.org/W2045012623","https://openalex.org/W2053376664","https://openalex.org/W2075220720","https://openalex.org/W2076194625","https://openalex.org/W2077399441","https://openalex.org/W2088412871","https://openalex.org/W2096541451","https://openalex.org/W2096822173","https://openalex.org/W2125910575","https://openalex.org/W2133416744","https://openalex.org/W2148043260","https://openalex.org/W2153490111","https://openalex.org/W2153593258","https://openalex.org/W2157497892","https://openalex.org/W2159675211","https://openalex.org/W2167482691","https://openalex.org/W2179127114","https://openalex.org/W2334281392","https://openalex.org/W2335008118","https://openalex.org/W2338932901","https://openalex.org/W2339819452","https://openalex.org/W2341972466","https://openalex.org/W2537623931","https://openalex.org/W2613082041","https://openalex.org/W2736887218","https://openalex.org/W2771361969","https://openalex.org/W2896490222","https://openalex.org/W2911188335","https://openalex.org/W2950258616","https://openalex.org/W2953394889","https://openalex.org/W2964243445","https://openalex.org/W2982532331","https://openalex.org/W2986115017","https://openalex.org/W2990177356","https://openalex.org/W3003422837","https://openalex.org/W3010559286","https://openalex.org/W3022285953","https://openalex.org/W3093482635","https://openalex.org/W4206275846","https://openalex.org/W4243979784","https://openalex.org/W4248467737","https://openalex.org/W4255659575","https://openalex.org/W4300009786","https://openalex.org/W6608852248","https://openalex.org/W6626531096","https://openalex.org/W6726716100","https://openalex.org/W6770410477"],"related_works":["https://openalex.org/W2006240110","https://openalex.org/W2909972699","https://openalex.org/W2039602384","https://openalex.org/W2751110224","https://openalex.org/W1966357780","https://openalex.org/W2496664377","https://openalex.org/W2288407995","https://openalex.org/W2147036980","https://openalex.org/W304756206","https://openalex.org/W4312613920"],"abstract_inverted_index":{"Efficient":[0],"integration":[1],"and":[2,26,55,60,73,91,109,128,141,145,151,170],"visualization":[3,33],"of":[4,34,70,79,157],"heterogeneous":[5],"biomedical":[6],"information":[7],"in":[8,37,47,85,111,148,178],"a":[9,13,48,68,77],"single":[10,49],"view":[11,50],"is":[12,146,181],"key":[14],"challenge.":[15],"In":[16,134],"this":[17],"study,":[18],"we":[19],"present":[20],"Arena3Dweb,":[21,41],"the":[22,32,102,155],"first,":[23],"fully":[24],"interactive":[25],"dependency-free,":[27],"web":[28],"application":[29],"which":[30],"allows":[31],"multilayered":[35],"graphs":[36,144],"3D":[38,112],"space.":[39,113],"With":[40],"users":[42,64],"can":[43,65,88,105,117,130],"integrate":[44],"multiple":[45],"networks":[46,90],"along":[51],"with":[52],"their":[53],"intra-":[54],"inter-layer":[56],"connections.":[57],"For":[58],"clearer":[59],"more":[61],"informative":[62],"views,":[63],"choose":[66],"between":[67],"plethora":[69],"layout":[71],"algorithms":[72],"apply":[74],"them":[75],"on":[76],"set":[78],"selected":[80],"layers":[81],"either":[82],"individually":[83],"or":[84,185],"combination.":[86],"Users":[87],"align":[89],"highlight":[92,121],"node":[93,125],"topological":[94],"features,":[95],"whereas":[96],"each":[97],"layer":[98],"as":[99,101],"well":[100],"whole":[103],"scene":[104],"be":[106,118,131],"translated,":[107],"rotated":[108],"scaled":[110],"User-selected":[114],"edge":[115],"colors":[116],"used":[119],"to":[120,173],"important":[122],"paths,":[123],"while":[124],"positioning,":[126],"coloring":[127],"resizing":[129],"adjusted":[132],"on-the-fly.":[133],"its":[135],"current":[136],"version,":[137],"Arena3Dweb":[138,158,180],"supports":[139],"weighted":[140],"unweighted":[142],"undirected":[143],"written":[147],"R,":[149],"Shiny":[150],"JavaScript.":[152],"We":[153],"demonstrate":[154],"functionality":[156],"using":[159],"two":[160],"different":[161],"use-case":[162],"scenarios;":[163],"one":[164,171],"regarding":[165],"drug":[166],"repurposing":[167],"for":[168],"SARS-CoV-2":[169],"related":[172],"GPCR":[174],"signaling":[175],"pathways":[176],"implicated":[177],"melanoma.":[179],"available":[182],"at":[183],"http://bib.fleming.gr:3838/Arena3D":[184],"http://bib.fleming.gr/Arena3D.":[186]},"counts_by_year":[{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":8},{"year":2023,"cited_by_count":9},{"year":2022,"cited_by_count":8},{"year":2021,"cited_by_count":3}],"updated_date":"2026-04-04T16:13:02.066488","created_date":"2025-10-10T00:00:00"}
