{"id":"https://openalex.org/W3215139907","doi":"https://doi.org/10.1093/nar/gkab1084","title":"PharmacoDB 2.0: improving scalability and transparency of <i>in vitro</i> pharmacogenomics analysis","display_name":"PharmacoDB 2.0: improving scalability and transparency of <i>in vitro</i> pharmacogenomics analysis","publication_year":2021,"publication_date":"2021-10-20","ids":{"openalex":"https://openalex.org/W3215139907","doi":"https://doi.org/10.1093/nar/gkab1084","mag":"3215139907","pmid":"https://pubmed.ncbi.nlm.nih.gov/34850112"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkab1084","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkab1084","pdf_url":"https://academic.oup.com/nar/article-pdf/50/D1/D1348/42057556/gkab1084.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/50/D1/D1348/42057556/gkab1084.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5019787063","display_name":"Nikta Feizi","orcid":null},"institutions":[{"id":"https://openalex.org/I1325899441","display_name":"University Health Network","ror":"https://ror.org/042xt5161","country_code":"CA","type":"healthcare","lineage":["https://openalex.org/I1325899441"]},{"id":"https://openalex.org/I2802654988","display_name":"Princess Margaret Cancer Centre","ror":"https://ror.org/03zayce58","country_code":"CA","type":"healthcare","lineage":["https://openalex.org/I1325899441","https://openalex.org/I2802654988"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Nikta Feizi","raw_affiliation_strings":["Princess Margaret Cancer Centre, University Health Network, Toronto, ON\u00a0M5G 2C1, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Princess Margaret Cancer Centre, University Health Network, Toronto, ON\u00a0M5G 2C1, Canada","institution_ids":["https://openalex.org/I2802654988","https://openalex.org/I1325899441"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007037437","display_name":"Sisira Kadambat Nair","orcid":"https://orcid.org/0000-0003-0693-9994"},"institutions":[{"id":"https://openalex.org/I1325899441","display_name":"University Health Network","ror":"https://ror.org/042xt5161","country_code":"CA","type":"healthcare","lineage":["https://openalex.org/I1325899441"]},{"id":"https://openalex.org/I2802654988","display_name":"Princess Margaret Cancer Centre","ror":"https://ror.org/03zayce58","country_code":"CA","type":"healthcare","lineage":["https://openalex.org/I1325899441","https://openalex.org/I2802654988"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Sisira Kadambat Nair","raw_affiliation_strings":["Princess Margaret Cancer Centre, University Health Network, Toronto, ON\u00a0M5G 2C1, Canada"],"raw_orcid":"https://orcid.org/0000-0003-0693-9994","affiliations":[{"raw_affiliation_string":"Princess Margaret Cancer Centre, University Health Network, Toronto, ON\u00a0M5G 2C1, Canada","institution_ids":["https://openalex.org/I2802654988","https://openalex.org/I1325899441"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066881174","display_name":"Petr Smirnov","orcid":"https://orcid.org/0000-0001-9395-8450"},"institutions":[{"id":"https://openalex.org/I1325899441","display_name":"University Health Network","ror":"https://ror.org/042xt5161","country_code":"CA","type":"healthcare","lineage":["https://openalex.org/I1325899441"]},{"id":"https://openalex.org/I185261750","display_name":"University of Toronto","ror":"https://ror.org/03dbr7087","country_code":"CA","type":"education","lineage":["https://openalex.org/I185261750"]},{"id":"https://openalex.org/I2802654988","display_name":"Princess Margaret Cancer Centre","ror":"https://ror.org/03zayce58","country_code":"CA","type":"healthcare","lineage":["https://openalex.org/I1325899441","https://openalex.org/I2802654988"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Petr Smirnov","raw_affiliation_strings":["Department of Medical Biophysics, University of Toronto, Toronto, ON M5G 1L7, Canada","Princess Margaret Cancer Centre, University Health Network, Toronto, ON\u00a0M5G 2C1, Canada"],"raw_orcid":"https://orcid.org/0000-0001-9395-8450","affiliations":[{"raw_affiliation_string":"Department of Medical Biophysics, University of Toronto, Toronto, ON M5G 1L7, Canada","institution_ids":["https://openalex.org/I185261750"]},{"raw_affiliation_string":"Princess Margaret Cancer Centre, University Health Network, Toronto, ON\u00a0M5G 2C1, Canada","institution_ids":["https://openalex.org/I2802654988","https://openalex.org/I1325899441"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040305688","display_name":"Gangesh Beri","orcid":null},"institutions":[{"id":"https://openalex.org/I1325899441","display_name":"University Health Network","ror":"https://ror.org/042xt5161","country_code":"CA","type":"healthcare","lineage":["https://openalex.org/I1325899441"]},{"id":"https://openalex.org/I2802654988","display_name":"Princess Margaret Cancer Centre","ror":"https://ror.org/03zayce58","country_code":"CA","type":"healthcare","lineage":["https://openalex.org/I1325899441","https://openalex.org/I2802654988"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Gangesh Beri","raw_affiliation_strings":["Princess Margaret Cancer Centre, University Health Network, Toronto, ON\u00a0M5G 2C1, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Princess Margaret Cancer Centre, University Health Network, Toronto, ON\u00a0M5G 2C1, Canada","institution_ids":["https://openalex.org/I2802654988","https://openalex.org/I1325899441"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060754160","display_name":"Christopher Eeles","orcid":"https://orcid.org/0000-0002-9962-7385"},"institutions":[{"id":"https://openalex.org/I1325899441","display_name":"University Health Network","ror":"https://ror.org/042xt5161","country_code":"CA","type":"healthcare","lineage":["https://openalex.org/I1325899441"]},{"id":"https://openalex.org/I2802654988","display_name":"Princess Margaret Cancer Centre","ror":"https://ror.org/03zayce58","country_code":"CA","type":"healthcare","lineage":["https://openalex.org/I1325899441","https://openalex.org/I2802654988"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Christopher Eeles","raw_affiliation_strings":["Princess Margaret Cancer Centre, University Health Network, Toronto, ON\u00a0M5G 2C1, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Princess Margaret Cancer Centre, University Health Network, Toronto, ON\u00a0M5G 2C1, Canada","institution_ids":["https://openalex.org/I2802654988","https://openalex.org/I1325899441"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5019617204","display_name":"Parinaz Nasr Esfahani","orcid":null},"institutions":[{"id":"https://openalex.org/I1325899441","display_name":"University Health Network","ror":"https://ror.org/042xt5161","country_code":"CA","type":"healthcare","lineage":["https://openalex.org/I1325899441"]},{"id":"https://openalex.org/I2802654988","display_name":"Princess Margaret Cancer Centre","ror":"https://ror.org/03zayce58","country_code":"CA","type":"healthcare","lineage":["https://openalex.org/I1325899441","https://openalex.org/I2802654988"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Parinaz Nasr Esfahani","raw_affiliation_strings":["Princess Margaret Cancer Centre, University Health Network, Toronto, ON\u00a0M5G 2C1, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Princess Margaret Cancer Centre, University Health Network, Toronto, ON\u00a0M5G 2C1, Canada","institution_ids":["https://openalex.org/I2802654988","https://openalex.org/I1325899441"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100827876","display_name":"Minoru Nakano","orcid":null},"institutions":[{"id":"https://openalex.org/I1325899441","display_name":"University Health Network","ror":"https://ror.org/042xt5161","country_code":"CA","type":"healthcare","lineage":["https://openalex.org/I1325899441"]},{"id":"https://openalex.org/I2802654988","display_name":"Princess Margaret Cancer Centre","ror":"https://ror.org/03zayce58","country_code":"CA","type":"healthcare","lineage":["https://openalex.org/I1325899441","https://openalex.org/I2802654988"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Minoru Nakano","raw_affiliation_strings":["Princess Margaret Cancer Centre, University Health Network, Toronto, ON\u00a0M5G 2C1, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Princess Margaret Cancer Centre, University Health Network, Toronto, ON\u00a0M5G 2C1, Canada","institution_ids":["https://openalex.org/I2802654988","https://openalex.org/I1325899441"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5112902190","display_name":"Denis Tkachuk","orcid":null},"institutions":[{"id":"https://openalex.org/I1325899441","display_name":"University Health Network","ror":"https://ror.org/042xt5161","country_code":"CA","type":"healthcare","lineage":["https://openalex.org/I1325899441"]},{"id":"https://openalex.org/I2802654988","display_name":"Princess Margaret Cancer Centre","ror":"https://ror.org/03zayce58","country_code":"CA","type":"healthcare","lineage":["https://openalex.org/I1325899441","https://openalex.org/I2802654988"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Denis Tkachuk","raw_affiliation_strings":["Princess Margaret Cancer Centre, University Health Network, Toronto, ON\u00a0M5G 2C1, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Princess Margaret Cancer Centre, University Health Network, Toronto, ON\u00a0M5G 2C1, Canada","institution_ids":["https://openalex.org/I2802654988","https://openalex.org/I1325899441"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085847953","display_name":"Anthony Mammoliti","orcid":null},"institutions":[{"id":"https://openalex.org/I1325899441","display_name":"University Health Network","ror":"https://ror.org/042xt5161","country_code":"CA","type":"healthcare","lineage":["https://openalex.org/I1325899441"]},{"id":"https://openalex.org/I185261750","display_name":"University of Toronto","ror":"https://ror.org/03dbr7087","country_code":"CA","type":"education","lineage":["https://openalex.org/I185261750"]},{"id":"https://openalex.org/I2802654988","display_name":"Princess Margaret Cancer Centre","ror":"https://ror.org/03zayce58","country_code":"CA","type":"healthcare","lineage":["https://openalex.org/I1325899441","https://openalex.org/I2802654988"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Anthony Mammoliti","raw_affiliation_strings":["Department of Medical Biophysics, University of Toronto, Toronto, ON M5G 1L7, Canada","Princess Margaret Cancer Centre, University Health Network, Toronto, ON\u00a0M5G 2C1, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Medical Biophysics, University of Toronto, Toronto, ON M5G 1L7, Canada","institution_ids":["https://openalex.org/I185261750"]},{"raw_affiliation_string":"Princess Margaret Cancer Centre, University Health Network, Toronto, ON\u00a0M5G 2C1, Canada","institution_ids":["https://openalex.org/I2802654988","https://openalex.org/I1325899441"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5090182196","display_name":"Evgeniya Gorobets","orcid":null},"institutions":[{"id":"https://openalex.org/I185261750","display_name":"University of Toronto","ror":"https://ror.org/03dbr7087","country_code":"CA","type":"education","lineage":["https://openalex.org/I185261750"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Evgeniya Gorobets","raw_affiliation_strings":["Department of Cell and Systems Biology, University of Toronto, Toronto, ON M5S 3G5, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Cell and Systems Biology, University of Toronto, Toronto, ON M5S 3G5, Canada","institution_ids":["https://openalex.org/I185261750"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011450761","display_name":"Arvind Singh Mer","orcid":"https://orcid.org/0000-0001-8510-7963"},"institutions":[{"id":"https://openalex.org/I1325899441","display_name":"University Health Network","ror":"https://ror.org/042xt5161","country_code":"CA","type":"healthcare","lineage":["https://openalex.org/I1325899441"]},{"id":"https://openalex.org/I185261750","display_name":"University of Toronto","ror":"https://ror.org/03dbr7087","country_code":"CA","type":"education","lineage":["https://openalex.org/I185261750"]},{"id":"https://openalex.org/I2802654988","display_name":"Princess Margaret Cancer Centre","ror":"https://ror.org/03zayce58","country_code":"CA","type":"healthcare","lineage":["https://openalex.org/I1325899441","https://openalex.org/I2802654988"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Arvind Singh Mer","raw_affiliation_strings":["Department of Medical Biophysics, University of Toronto, Toronto, ON M5G 1L7, Canada","Princess Margaret Cancer Centre, University Health Network, Toronto, ON\u00a0M5G 2C1, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Medical Biophysics, University of Toronto, Toronto, ON M5G 1L7, Canada","institution_ids":["https://openalex.org/I185261750"]},{"raw_affiliation_string":"Princess Margaret Cancer Centre, University Health Network, Toronto, ON\u00a0M5G 2C1, Canada","institution_ids":["https://openalex.org/I2802654988","https://openalex.org/I1325899441"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032366086","display_name":"Eva Lin","orcid":"https://orcid.org/0009-0001-6099-3847"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Eva Lin","raw_affiliation_strings":["Department of Discovery Oncology, Genentech Inc, South San Francisco, CA 94080, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Discovery Oncology, Genentech Inc, South San Francisco, CA 94080, USA","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036753038","display_name":"Yihong Yu","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Yihong Yu","raw_affiliation_strings":["Department of Discovery Oncology, Genentech Inc, South San Francisco, CA 94080, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Discovery Oncology, Genentech Inc, South San Francisco, CA 94080, USA","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063029120","display_name":"Scott E. Martin","orcid":"https://orcid.org/0000-0001-5685-9787"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Scott Martin","raw_affiliation_strings":["Department of Discovery Oncology, Genentech Inc, South San Francisco, CA 94080, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Discovery Oncology, Genentech Inc, South San Francisco, CA 94080, USA","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5018837401","display_name":"Marc Hafner","orcid":"https://orcid.org/0000-0003-1337-7598"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Marc Hafner","raw_affiliation_strings":["Department of Oncology Bioinformatics, Genentech Inc, South San Francisco, CA 94080, USA"],"raw_orcid":"https://orcid.org/0000-0003-1337-7598","affiliations":[{"raw_affiliation_string":"Department of Oncology Bioinformatics, Genentech Inc, South San Francisco, CA 94080, USA","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5010487226","display_name":"Benjamin Haibe\u2010Kains","orcid":"https://orcid.org/0000-0002-7684-0079"},"institutions":[{"id":"https://openalex.org/I112260969","display_name":"Ontario Institute for Cancer Research","ror":"https://ror.org/043q8yx54","country_code":"CA","type":"funder","lineage":["https://openalex.org/I112260969"]},{"id":"https://openalex.org/I1325899441","display_name":"University Health Network","ror":"https://ror.org/042xt5161","country_code":"CA","type":"healthcare","lineage":["https://openalex.org/I1325899441"]},{"id":"https://openalex.org/I185261750","display_name":"University of Toronto","ror":"https://ror.org/03dbr7087","country_code":"CA","type":"education","lineage":["https://openalex.org/I185261750"]},{"id":"https://openalex.org/I2802654988","display_name":"Princess Margaret Cancer Centre","ror":"https://ror.org/03zayce58","country_code":"CA","type":"healthcare","lineage":["https://openalex.org/I1325899441","https://openalex.org/I2802654988"]},{"id":"https://openalex.org/I4210127509","display_name":"Vector Institute","ror":"https://ror.org/03kqdja62","country_code":"CA","type":"facility","lineage":["https://openalex.org/I4210127509"]}],"countries":["CA"],"is_corresponding":true,"raw_author_name":"Benjamin Haibe-Kains","raw_affiliation_strings":["Department of Computer Science, University of Toronto, Toronto, ON M5T 3A1, Canada","Department of Medical Biophysics, University of Toronto, Toronto, ON M5G 1L7, Canada","Ontario Institute for Cancer Research, Toronto, ON M5G 0A3, Canada","Princess Margaret Cancer Centre, University Health Network, Toronto, ON\u00a0M5G 2C1, Canada","Vector Institute for Artificial Intelligence, Toronto, ON M5G 1M1, Canada"],"raw_orcid":"https://orcid.org/0000-0002-7684-0079","affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Toronto, Toronto, ON M5T 3A1, Canada","institution_ids":["https://openalex.org/I185261750"]},{"raw_affiliation_string":"Department of Medical Biophysics, University of Toronto, Toronto, ON M5G 1L7, Canada","institution_ids":["https://openalex.org/I185261750"]},{"raw_affiliation_string":"Ontario Institute for Cancer Research, Toronto, ON M5G 0A3, Canada","institution_ids":["https://openalex.org/I112260969"]},{"raw_affiliation_string":"Princess Margaret Cancer Centre, University Health Network, Toronto, ON\u00a0M5G 2C1, Canada","institution_ids":["https://openalex.org/I2802654988","https://openalex.org/I1325899441"]},{"raw_affiliation_string":"Vector Institute for Artificial Intelligence, Toronto, ON M5G 1M1, Canada","institution_ids":["https://openalex.org/I4210127509"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":16,"corresponding_author_ids":["https://openalex.org/A5010487226"],"corresponding_institution_ids":["https://openalex.org/I112260969","https://openalex.org/I1325899441","https://openalex.org/I185261750","https://openalex.org/I2802654988","https://openalex.org/I4210127509"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":3.7177,"has_fulltext":true,"cited_by_count":30,"citation_normalized_percentile":{"value":0.93146264,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":95,"max":99},"biblio":{"volume":"50","issue":"D1","first_page":"D1348","last_page":"D1357"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10375","display_name":"Pharmacogenetics and Drug Metabolism","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/3004","display_name":"Pharmacology"},"field":{"id":"https://openalex.org/fields/30","display_name":"Pharmacology, Toxicology and Pharmaceutics"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10375","display_name":"Pharmacogenetics and Drug Metabolism","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/3004","display_name":"Pharmacology"},"field":{"id":"https://openalex.org/fields/30","display_name":"Pharmacology, Toxicology and Pharmaceutics"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11287","display_name":"Cancer Genomics and Diagnostics","score":0.9927999973297119,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9925000071525574,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/pharmacogenomics","display_name":"Pharmacogenomics","score":0.936276912689209},{"id":"https://openalex.org/keywords/drug-response","display_name":"Drug response","score":0.703251838684082},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5681946873664856},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5652338266372681},{"id":"https://openalex.org/keywords/profiling","display_name":"Profiling (computer programming)","score":0.5325626134872437},{"id":"https://openalex.org/keywords/cancer-cell-lines","display_name":"Cancer cell lines","score":0.48004209995269775},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.4678889811038971},{"id":"https://openalex.org/keywords/precision-medicine","display_name":"Precision medicine","score":0.4278782606124878},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.4216971695423126},{"id":"https://openalex.org/keywords/standardization","display_name":"Standardization","score":0.4108957052230835},{"id":"https://openalex.org/keywords/drug","display_name":"Drug","score":0.39443373680114746},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.30963313579559326},{"id":"https://openalex.org/keywords/cancer","display_name":"Cancer","score":0.20355579257011414},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.19930815696716309},{"id":"https://openalex.org/keywords/pharmacology","display_name":"Pharmacology","score":0.14836406707763672},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.14468416571617126},{"id":"https://openalex.org/keywords/cancer-cell","display_name":"Cancer cell","score":0.13260293006896973},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.07723239064216614}],"concepts":[{"id":"https://openalex.org/C170734499","wikidata":"https://www.wikidata.org/wiki/Q1152227","display_name":"Pharmacogenomics","level":2,"score":0.936276912689209},{"id":"https://openalex.org/C2994119904","wikidata":"https://www.wikidata.org/wiki/Q1251001","display_name":"Drug response","level":3,"score":0.703251838684082},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5681946873664856},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5652338266372681},{"id":"https://openalex.org/C187191949","wikidata":"https://www.wikidata.org/wiki/Q1138496","display_name":"Profiling (computer programming)","level":2,"score":0.5325626134872437},{"id":"https://openalex.org/C2994372470","wikidata":"https://www.wikidata.org/wiki/Q4118072","display_name":"Cancer cell lines","level":4,"score":0.48004209995269775},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.4678889811038971},{"id":"https://openalex.org/C163763905","wikidata":"https://www.wikidata.org/wiki/Q17075943","display_name":"Precision medicine","level":2,"score":0.4278782606124878},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.4216971695423126},{"id":"https://openalex.org/C188087704","wikidata":"https://www.wikidata.org/wiki/Q369577","display_name":"Standardization","level":2,"score":0.4108957052230835},{"id":"https://openalex.org/C2780035454","wikidata":"https://www.wikidata.org/wiki/Q8386","display_name":"Drug","level":2,"score":0.39443373680114746},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.30963313579559326},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.20355579257011414},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.19930815696716309},{"id":"https://openalex.org/C98274493","wikidata":"https://www.wikidata.org/wiki/Q128406","display_name":"Pharmacology","level":1,"score":0.14836406707763672},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.14468416571617126},{"id":"https://openalex.org/C96232424","wikidata":"https://www.wikidata.org/wiki/Q4118072","display_name":"Cancer cell","level":3,"score":0.13260293006896973},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.07723239064216614},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000071185","descriptor_name":"Pharmacogenomic Testing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D000071185","descriptor_name":"Pharmacogenomic Testing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D000071185","descriptor_name":"Pharmacogenomic Testing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D000071185","descriptor_name":"Pharmacogenomic Testing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010597","descriptor_name":"Pharmacogenetics","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D010597","descriptor_name":"Pharmacogenetics","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D010597","descriptor_name":"Pharmacogenetics","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D010597","descriptor_name":"Pharmacogenetics","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/nar/gkab1084","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkab1084","pdf_url":"https://academic.oup.com/nar/article-pdf/50/D1/D1348/42057556/gkab1084.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:34850112","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34850112","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:8728279","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8728279","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkab1084","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkab1084","pdf_url":"https://academic.oup.com/nar/article-pdf/50/D1/D1348/42057556/gkab1084.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G3224298062","display_name":null,"funder_award_id":"15414","funder_id":"https://openalex.org/F4320310787","funder_display_name":"Genome Canada"}],"funders":[{"id":"https://openalex.org/F4320310787","display_name":"Genome Canada","ror":"https://ror.org/029s29983"},{"id":"https://openalex.org/F4320311559","display_name":"Princess Margaret Cancer Foundation","ror":"https://ror.org/00ctsa544"},{"id":"https://openalex.org/F4320313290","display_name":"Ontario Institute for Cancer Research","ror":"https://ror.org/043q8yx54"},{"id":"https://openalex.org/F4320314607","display_name":"Government of Ontario","ror":"https://ror.org/015pzp858"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3215139907.pdf","grobid_xml":"https://content.openalex.org/works/W3215139907.grobid-xml"},"referenced_works_count":47,"referenced_works":["https://openalex.org/W1967835627","https://openalex.org/W1982729445","https://openalex.org/W1989277387","https://openalex.org/W2043398720","https://openalex.org/W2087312216","https://openalex.org/W2099456677","https://openalex.org/W2103196126","https://openalex.org/W2108068107","https://openalex.org/W2108594680","https://openalex.org/W2118909720","https://openalex.org/W2120064876","https://openalex.org/W2125321800","https://openalex.org/W2125789330","https://openalex.org/W2220553089","https://openalex.org/W2261944919","https://openalex.org/W2294990791","https://openalex.org/W2407075689","https://openalex.org/W2461427403","https://openalex.org/W2558999090","https://openalex.org/W2759360483","https://openalex.org/W2777884179","https://openalex.org/W2801555904","https://openalex.org/W2805978167","https://openalex.org/W2916892775","https://openalex.org/W2946201643","https://openalex.org/W3003119869","https://openalex.org/W3012807061","https://openalex.org/W3026552348","https://openalex.org/W3039462624","https://openalex.org/W3042695800","https://openalex.org/W3097145107","https://openalex.org/W3102612616","https://openalex.org/W3103634428","https://openalex.org/W3131096504","https://openalex.org/W3131728774","https://openalex.org/W3135371071","https://openalex.org/W3139532774","https://openalex.org/W3157357664","https://openalex.org/W3186982812","https://openalex.org/W3189729408","https://openalex.org/W3200762293","https://openalex.org/W3202488690","https://openalex.org/W3211402536","https://openalex.org/W4231254854","https://openalex.org/W6677929958","https://openalex.org/W6794922505","https://openalex.org/W6813094581"],"related_works":["https://openalex.org/W4231349869","https://openalex.org/W2896304141","https://openalex.org/W4239789534","https://openalex.org/W4387225326","https://openalex.org/W2019271482","https://openalex.org/W1537547840","https://openalex.org/W4392425672","https://openalex.org/W2748688389","https://openalex.org/W2563611238","https://openalex.org/W2159063798"],"abstract_inverted_index":{"Cancer":[0,94],"pharmacogenomics":[1,21,161,171],"studies":[2],"provide":[3],"valuable":[4,167],"insights":[5],"into":[6],"disease":[7],"progression":[8],"and":[9,14,25,45,96,112,126,129,135,156,174],"associations":[10],"between":[11],"genomic":[12],"features":[13],"drug":[15,47,134],"response.":[16],"PharmacoDB":[17,61,163],"integrates":[18],"multiple":[19],"cancer":[20,179],"datasets":[22,69],"profiling":[23],"approved":[24],"investigational":[26],"drugs":[27],"across":[28,42],"cell":[29,136],"lines":[30],"from":[31,87],"diverse":[32],"tissue":[33,121],"types.":[34],"The":[35,142],"web-application":[36],"enables":[37],"users":[38],"to":[39,116,133,153,158],"efficiently":[40],"navigate":[41],"datasets,":[43,172],"view":[44],"compare":[46],"dose-response":[48,124],"data":[49,86,108],"for":[50,169],"a":[51,149,166],"specific":[52],"drug-cell":[53],"line":[54,137],"pair.":[55],"In":[56],"the":[57,73,88,97,140],"new":[58,68],"version":[59],"of":[60,90,106,123,178],"(version":[62],"2.0,":[63],"https://pharmacodb.ca/),":[64],"we":[65],"present":[66],"(i)":[67],"such":[70,119],"as":[71,82,84,120],"NCI-60,":[72],"Profiling":[74],"Relative":[75],"Inhibition":[76],"Simultaneously":[77],"in":[78,93,139],"Mixtures":[79],"(PRISM)":[80],"dataset,":[81],"well":[83],"updated":[85],"Genomics":[89],"Drug":[91],"Sensitivity":[92],"(GDSC)":[95],"Genentech":[98],"Cell":[99],"Line":[100],"Screening":[101],"Initiative":[102],"(gCSI);":[103],"(ii)":[104],"implementation":[105],"FAIR":[107],"pipelines":[109],"using":[110,148],"ORCESTRA":[111],"PharmacoDI;":[113],"(iii)":[114],"enhancements":[115],"drug-response":[117,176],"analysis":[118],"distribution":[122],"metrics":[125],"biomarker":[127],"analysis;":[128],"(iv)":[130],"improved":[131],"connectivity":[132],"databases":[138],"community.":[141],"web":[143],"interface":[144],"has":[145],"been":[146],"rewritten":[147],"modern":[150],"technology":[151],"stack":[152],"ensure":[154],"scalability":[155],"standardization":[157],"accommodate":[159],"growing":[160],"datasets.":[162],"2.0":[164],"is":[165],"tool":[168],"mining":[170],"comparing":[173],"assessing":[175],"phenotypes":[177],"models.":[180]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":8},{"year":2024,"cited_by_count":8},{"year":2023,"cited_by_count":10},{"year":2022,"cited_by_count":3}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2021-12-06T00:00:00"}
