{"id":"https://openalex.org/W3211718555","doi":"https://doi.org/10.1093/nar/gkab1016","title":"Rhea, the reaction knowledgebase in 2022","display_name":"Rhea, the reaction knowledgebase in 2022","publication_year":2021,"publication_date":"2021-11-09","ids":{"openalex":"https://openalex.org/W3211718555","doi":"https://doi.org/10.1093/nar/gkab1016","mag":"3211718555","pmid":"https://pubmed.ncbi.nlm.nih.gov/34755880"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkab1016","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkab1016","pdf_url":"https://academic.oup.com/nar/article-pdf/50/D1/D693/42058388/gkab1016.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","datacite","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/50/D1/D693/42058388/gkab1016.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5078746245","display_name":"Parit Bansal","orcid":"https://orcid.org/0000-0002-0875-1680"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]}],"countries":["CH"],"is_corresponding":true,"raw_author_name":"Parit Bansal","raw_affiliation_strings":["Swiss-Prot group, SIB Swiss Institute of Bioinformatics, Centre Medical Universitaire, CH-1211 Geneva 4, Switzerland"],"raw_orcid":"https://orcid.org/0000-0002-0875-1680","affiliations":[{"raw_affiliation_string":"Swiss-Prot group, SIB Swiss Institute of Bioinformatics, Centre Medical Universitaire, CH-1211 Geneva 4, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091324355","display_name":"Anne Morgat","orcid":"https://orcid.org/0000-0002-1216-2969"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]}],"countries":["CH"],"is_corresponding":true,"raw_author_name":"Anne Morgat","raw_affiliation_strings":["Swiss-Prot group, SIB Swiss Institute of Bioinformatics, Centre Medical Universitaire, CH-1211 Geneva 4, Switzerland"],"raw_orcid":"https://orcid.org/0000-0002-1216-2969","affiliations":[{"raw_affiliation_string":"Swiss-Prot group, SIB Swiss Institute of Bioinformatics, Centre Medical Universitaire, CH-1211 Geneva 4, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077863600","display_name":"Kristian B. Axelsen","orcid":"https://orcid.org/0000-0003-3889-2879"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Kristian B Axelsen","raw_affiliation_strings":["Swiss-Prot group, SIB Swiss Institute of Bioinformatics, Centre Medical Universitaire, CH-1211 Geneva 4, Switzerland"],"raw_orcid":"https://orcid.org/0000-0003-3889-2879","affiliations":[{"raw_affiliation_string":"Swiss-Prot group, SIB Swiss Institute of Bioinformatics, Centre Medical Universitaire, CH-1211 Geneva 4, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5019437130","display_name":"Venkatesh Muthukrishnan","orcid":"https://orcid.org/0000-0002-6850-9888"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Venkatesh Muthukrishnan","raw_affiliation_strings":["Swiss-Prot group, SIB Swiss Institute of Bioinformatics, Centre Medical Universitaire, CH-1211 Geneva 4, Switzerland"],"raw_orcid":"https://orcid.org/0000-0002-6850-9888","affiliations":[{"raw_affiliation_string":"Swiss-Prot group, SIB Swiss Institute of Bioinformatics, Centre Medical Universitaire, CH-1211 Geneva 4, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089027967","display_name":"Elisabeth Coudert","orcid":"https://orcid.org/0000-0001-8314-404X"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Elisabeth Coudert","raw_affiliation_strings":["Swiss-Prot group, SIB Swiss Institute of Bioinformatics, Centre Medical Universitaire, CH-1211 Geneva 4, Switzerland"],"raw_orcid":"https://orcid.org/0000-0001-8314-404X","affiliations":[{"raw_affiliation_string":"Swiss-Prot group, SIB Swiss Institute of Bioinformatics, Centre Medical Universitaire, CH-1211 Geneva 4, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067959898","display_name":"Lucila Aimo","orcid":"https://orcid.org/0000-0003-0943-6401"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Lucila Aimo","raw_affiliation_strings":["Swiss-Prot group, SIB Swiss Institute of Bioinformatics, Centre Medical Universitaire, CH-1211 Geneva 4, Switzerland"],"raw_orcid":"https://orcid.org/0000-0003-0943-6401","affiliations":[{"raw_affiliation_string":"Swiss-Prot group, SIB Swiss Institute of Bioinformatics, Centre Medical Universitaire, CH-1211 Geneva 4, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028177121","display_name":"Nevila Hyka\u2010Nouspikel","orcid":"https://orcid.org/0000-0001-7855-209X"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Nevila Hyka-Nouspikel","raw_affiliation_strings":["Swiss-Prot group, SIB Swiss Institute of Bioinformatics, Centre Medical Universitaire, CH-1211 Geneva 4, Switzerland"],"raw_orcid":"https://orcid.org/0000-0001-7855-209X","affiliations":[{"raw_affiliation_string":"Swiss-Prot group, SIB Swiss Institute of Bioinformatics, Centre Medical Universitaire, CH-1211 Geneva 4, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051386555","display_name":"Elisabeth Gasteiger","orcid":"https://orcid.org/0000-0003-1829-162X"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Elisabeth Gasteiger","raw_affiliation_strings":["Swiss-Prot group, SIB Swiss Institute of Bioinformatics, Centre Medical Universitaire, CH-1211 Geneva 4, Switzerland"],"raw_orcid":"https://orcid.org/0000-0003-1829-162X","affiliations":[{"raw_affiliation_string":"Swiss-Prot group, SIB Swiss Institute of Bioinformatics, Centre Medical Universitaire, CH-1211 Geneva 4, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5019695981","display_name":"Arnaud Kerhornou","orcid":"https://orcid.org/0000-0002-2890-295X"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Arnaud Kerhornou","raw_affiliation_strings":["Swiss-Prot group, SIB Swiss Institute of Bioinformatics, Centre Medical Universitaire, CH-1211 Geneva 4, Switzerland"],"raw_orcid":"https://orcid.org/0000-0002-2890-295X","affiliations":[{"raw_affiliation_string":"Swiss-Prot group, SIB Swiss Institute of Bioinformatics, Centre Medical Universitaire, CH-1211 Geneva 4, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040172372","display_name":"Teresa Batista Neto","orcid":"https://orcid.org/0000-0003-4543-637X"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Teresa Batista Neto","raw_affiliation_strings":["Swiss-Prot group, SIB Swiss Institute of Bioinformatics, Centre Medical Universitaire, CH-1211 Geneva 4, Switzerland"],"raw_orcid":"https://orcid.org/0000-0003-4543-637X","affiliations":[{"raw_affiliation_string":"Swiss-Prot group, SIB Swiss Institute of Bioinformatics, Centre Medical Universitaire, CH-1211 Geneva 4, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073745464","display_name":"Monica Pozzato","orcid":"https://orcid.org/0000-0002-3080-5243"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Monica Pozzato","raw_affiliation_strings":["Swiss-Prot group, SIB Swiss Institute of Bioinformatics, Centre Medical Universitaire, CH-1211 Geneva 4, Switzerland"],"raw_orcid":"https://orcid.org/0000-0002-3080-5243","affiliations":[{"raw_affiliation_string":"Swiss-Prot group, SIB Swiss Institute of Bioinformatics, Centre Medical Universitaire, CH-1211 Geneva 4, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064235679","display_name":"Marie-Claude Blatter","orcid":"https://orcid.org/0000-0002-7474-1499"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Marie-Claude Blatter","raw_affiliation_strings":["Swiss-Prot group, SIB Swiss Institute of Bioinformatics, Centre Medical Universitaire, CH-1211 Geneva 4, Switzerland"],"raw_orcid":"https://orcid.org/0000-0002-7474-1499","affiliations":[{"raw_affiliation_string":"Swiss-Prot group, SIB Swiss Institute of Bioinformatics, Centre Medical Universitaire, CH-1211 Geneva 4, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091039507","display_name":"Alexandr Ignatchenko","orcid":"https://orcid.org/0000-0002-6083-941X"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Alex Ignatchenko","raw_affiliation_strings":["EMBL-EBI European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK"],"raw_orcid":"https://orcid.org/0000-0002-6083-941X","affiliations":[{"raw_affiliation_string":"EMBL-EBI European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK","institution_ids":["https://openalex.org/I1303153112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055073392","display_name":"Nicole Redaschi","orcid":"https://orcid.org/0000-0001-8890-2268"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Nicole Redaschi","raw_affiliation_strings":["Swiss-Prot group, SIB Swiss Institute of Bioinformatics, Centre Medical Universitaire, CH-1211 Geneva 4, Switzerland"],"raw_orcid":"https://orcid.org/0000-0001-8890-2268","affiliations":[{"raw_affiliation_string":"Swiss-Prot group, SIB Swiss Institute of Bioinformatics, Centre Medical Universitaire, CH-1211 Geneva 4, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5090916579","display_name":"Alan Bridge","orcid":"https://orcid.org/0000-0003-2148-9135"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]}],"countries":["CH"],"is_corresponding":true,"raw_author_name":"Alan Bridge","raw_affiliation_strings":["Swiss-Prot group, SIB Swiss Institute of Bioinformatics, Centre Medical Universitaire, CH-1211 Geneva 4, Switzerland"],"raw_orcid":"https://orcid.org/0000-0003-2148-9135","affiliations":[{"raw_affiliation_string":"Swiss-Prot group, SIB Swiss Institute of Bioinformatics, Centre Medical Universitaire, CH-1211 Geneva 4, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5078746245","https://openalex.org/A5090916579","https://openalex.org/A5091324355"],"corresponding_institution_ids":["https://openalex.org/I12708293"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":11.1025,"has_fulltext":false,"cited_by_count":262,"citation_normalized_percentile":{"value":0.99235068,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":93,"max":100},"biblio":{"volume":"50","issue":"D1","first_page":"D693","last_page":"D700"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9979000091552734,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9939000010490417,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/uniprot","display_name":"UniProt","score":0.9233130216598511},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.6793532371520996},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.5452840328216553},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5205181837081909},{"id":"https://openalex.org/keywords/resource","display_name":"Resource (disambiguation)","score":0.4513477683067322},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.41999152302742004},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.3373885750770569},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.32550591230392456},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.283244788646698},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.1359071135520935}],"concepts":[{"id":"https://openalex.org/C202264299","wikidata":"https://www.wikidata.org/wiki/Q905695","display_name":"UniProt","level":3,"score":0.9233130216598511},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.6793532371520996},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.5452840328216553},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5205181837081909},{"id":"https://openalex.org/C206345919","wikidata":"https://www.wikidata.org/wiki/Q20380951","display_name":"Resource (disambiguation)","level":2,"score":0.4513477683067322},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.41999152302742004},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3373885750770569},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.32550591230392456},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.283244788646698},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.1359071135520935},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051188","descriptor_name":"Knowledge Bases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051188","descriptor_name":"Knowledge Bases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051188","descriptor_name":"Knowledge Bases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051188","descriptor_name":"Knowledge Bases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055598","descriptor_name":"Chemical Phenomena","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055598","descriptor_name":"Chemical Phenomena","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055598","descriptor_name":"Chemical Phenomena","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055598","descriptor_name":"Chemical Phenomena","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1093/nar/gkab1016","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkab1016","pdf_url":"https://academic.oup.com/nar/article-pdf/50/D1/D693/42058388/gkab1016.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:34755880","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34755880","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:8728268","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8728268","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"},{"id":"doi:10.25504/fairsharing.pn1sr5","is_oa":true,"landing_page_url":"https://doi.org/10.25504/fairsharing.pn1sr5","pdf_url":null,"source":{"id":"https://openalex.org/S7407053452","display_name":"FAIRsharing.org","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"Dataset"}],"best_oa_location":{"id":"doi:10.1093/nar/gkab1016","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkab1016","pdf_url":"https://academic.oup.com/nar/article-pdf/50/D1/D693/42058388/gkab1016.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":60,"referenced_works":["https://openalex.org/W1508604947","https://openalex.org/W1935434993","https://openalex.org/W1989277387","https://openalex.org/W2045950965","https://openalex.org/W2104295259","https://openalex.org/W2110679449","https://openalex.org/W2111973517","https://openalex.org/W2117306286","https://openalex.org/W2144200239","https://openalex.org/W2341006608","https://openalex.org/W2525035644","https://openalex.org/W2585620150","https://openalex.org/W2765284721","https://openalex.org/W2782584560","https://openalex.org/W2807294144","https://openalex.org/W2808435053","https://openalex.org/W2895341279","https://openalex.org/W2895689867","https://openalex.org/W2949574480","https://openalex.org/W2955385017","https://openalex.org/W2965590414","https://openalex.org/W2973232653","https://openalex.org/W2977870980","https://openalex.org/W2981519702","https://openalex.org/W2982396487","https://openalex.org/W2985502476","https://openalex.org/W2985897872","https://openalex.org/W2995514860","https://openalex.org/W2999321803","https://openalex.org/W3024553150","https://openalex.org/W3045967457","https://openalex.org/W3088265803","https://openalex.org/W3093934881","https://openalex.org/W3094771832","https://openalex.org/W3095049046","https://openalex.org/W3096828292","https://openalex.org/W3097145107","https://openalex.org/W3112376646","https://openalex.org/W3112600195","https://openalex.org/W3118617471","https://openalex.org/W3118936575","https://openalex.org/W3144701084","https://openalex.org/W3146944767","https://openalex.org/W3155457888","https://openalex.org/W3157132663","https://openalex.org/W3160706794","https://openalex.org/W3163048757","https://openalex.org/W3164046276","https://openalex.org/W3166142427","https://openalex.org/W3173412145","https://openalex.org/W3175582711","https://openalex.org/W3185730212","https://openalex.org/W3211129705","https://openalex.org/W3211718555","https://openalex.org/W4213314063","https://openalex.org/W4231254854","https://openalex.org/W6769649089","https://openalex.org/W6770028678","https://openalex.org/W6784526300","https://openalex.org/W6813094581"],"related_works":["https://openalex.org/W24553703","https://openalex.org/W4211000692","https://openalex.org/W4212920271","https://openalex.org/W2612240612","https://openalex.org/W2102027645","https://openalex.org/W2107785922","https://openalex.org/W2035528219","https://openalex.org/W2402478170","https://openalex.org/W2946410450","https://openalex.org/W2901823680"],"abstract_inverted_index":{"Rhea":[0,32,57,76,82,101],"(https://www.rhea-db.org)":[1],"is":[2],"an":[3,84],"expert-curated":[4],"knowledgebase":[5,68],"of":[6,17,28,41,56,73,81,100],"biochemical":[7],"reactions":[8],"based":[9],"on":[10],"the":[11,38,54,59,66,71,79,98,112],"chemical":[12],"ontology":[13],"ChEBI":[14],"(Chemical":[15],"Entities":[16],"Biological":[18],"Interest)":[19],"(https://www.ebi.ac.uk/chebi).":[20],"In":[21],"this":[22],"paper,":[23],"we":[24],"describe":[25],"a":[26,74,103],"number":[27],"key":[29],"developments":[30,95],"in":[31,37,45,52,65,115],"since":[33],"our":[34],"last":[35],"report":[36],"database":[39],"issue":[40],"Nucleic":[42],"Acids":[43],"Research":[44],"2019.":[46],"These":[47],"include":[48],"improved":[49],"reaction":[50],"coverage":[51],"Rhea,":[53],"adoption":[55],"as":[58,83,102],"reference":[60,104],"vocabulary":[61],"for":[62],"enzyme":[63],"annotation":[64],"UniProt":[67],"UniProtKB":[69],"(https://www.uniprot.org),":[70],"development":[72],"new":[75],"website,":[77],"and":[78,93,108,111],"designation":[80],"ELIXIR":[85],"Core":[86],"Data":[87],"Resource.":[88],"We":[89],"hope":[90],"that":[91],"these":[92],"other":[94],"will":[96],"enhance":[97],"utility":[99],"resource":[105],"to":[106],"study":[107],"engineer":[109],"enzymes":[110],"metabolic":[113],"systems":[114],"which":[116],"they":[117],"function.":[118]},"counts_by_year":[{"year":2026,"cited_by_count":42},{"year":2025,"cited_by_count":70},{"year":2024,"cited_by_count":63},{"year":2023,"cited_by_count":55},{"year":2022,"cited_by_count":30},{"year":2021,"cited_by_count":2}],"updated_date":"2026-07-23T08:03:31.855105","created_date":"2021-11-22T00:00:00"}
