{"id":"https://openalex.org/W3094586730","doi":"https://doi.org/10.1093/nar/gkaa916","title":"REDIportal: millions of novel A-to-I RNA editing events from thousands of RNAseq experiments","display_name":"REDIportal: millions of novel A-to-I RNA editing events from thousands of RNAseq experiments","publication_year":2020,"publication_date":"2020-10-05","ids":{"openalex":"https://openalex.org/W3094586730","doi":"https://doi.org/10.1093/nar/gkaa916","mag":"3094586730","pmid":"https://pubmed.ncbi.nlm.nih.gov/33104797"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkaa916","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkaa916","pdf_url":"https://academic.oup.com/nar/article-pdf/49/D1/D1012/35364129/gkaa916.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/49/D1/D1012/35364129/gkaa916.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5079451849","display_name":"Luigi Mansi","orcid":"https://orcid.org/0000-0001-8892-0423"},"institutions":[{"id":"https://openalex.org/I5561750","display_name":"University of Bari Aldo Moro","ror":"https://ror.org/027ynra39","country_code":"IT","type":"education","lineage":["https://openalex.org/I5561750"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Luigi Mansi","raw_affiliation_strings":["Department of Biosciences, Biotechnologies and Biopharmaceutics (DBBB), University of Bari, Via Orabona 4, 70125 Bari, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biosciences, Biotechnologies and Biopharmaceutics (DBBB), University of Bari, Via Orabona 4, 70125 Bari, Italy","institution_ids":["https://openalex.org/I5561750"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5013315777","display_name":"M. A. Tangaro","orcid":"https://orcid.org/0000-0003-3923-2266"},"institutions":[{"id":"https://openalex.org/I4210148743","display_name":"Institute of Biomembranes, Bioenergetics and Molecular Biotechnologies","ror":"https://ror.org/05nzf7q96","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210148743","https://openalex.org/I4210155236"]},{"id":"https://openalex.org/I4210155236","display_name":"National Research Council","ror":"https://ror.org/04zaypm56","country_code":"IT","type":"nonprofit","lineage":["https://openalex.org/I4210155236"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Marco Antonio Tangaro","raw_affiliation_strings":["Institute of Biomembranes, Bioenergetics and Molecular Biotechnologies (IBIOM), National Research Council, Via Amendola 122/O, 70126 Bari, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Biomembranes, Bioenergetics and Molecular Biotechnologies (IBIOM), National Research Council, Via Amendola 122/O, 70126 Bari, Italy","institution_ids":["https://openalex.org/I4210148743","https://openalex.org/I4210155236"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5069170116","display_name":"Claudio Lo Giudice","orcid":"https://orcid.org/0000-0003-3609-8938"},"institutions":[{"id":"https://openalex.org/I5561750","display_name":"University of Bari Aldo Moro","ror":"https://ror.org/027ynra39","country_code":"IT","type":"education","lineage":["https://openalex.org/I5561750"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Claudio Lo\u00a0Giudice","raw_affiliation_strings":["Department of Biosciences, Biotechnologies and Biopharmaceutics (DBBB), University of Bari, Via Orabona 4, 70125 Bari, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biosciences, Biotechnologies and Biopharmaceutics (DBBB), University of Bari, Via Orabona 4, 70125 Bari, Italy","institution_ids":["https://openalex.org/I5561750"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023632596","display_name":"Tiziano Flati","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Tiziano Flati","raw_affiliation_strings":["SCAI-Super Computing Applications and Innovation Department, CINECA, Via dei Tizii 6B, 00185 Rome, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"SCAI-Super Computing Applications and Innovation Department, CINECA, Via dei Tizii 6B, 00185 Rome, Italy","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037132858","display_name":"Eli Kopel","orcid":"https://orcid.org/0000-0002-3235-1644"},"institutions":[{"id":"https://openalex.org/I13955877","display_name":"Bar-Ilan University","ror":"https://ror.org/03kgsv495","country_code":"IL","type":"education","lineage":["https://openalex.org/I13955877"]}],"countries":["IL"],"is_corresponding":false,"raw_author_name":"Eli Kopel","raw_affiliation_strings":["Mina and Everard Goodman Faculty of Life Sciences, Bar-Ilan University, 52900 Ramat Gan, Israel"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Mina and Everard Goodman Faculty of Life Sciences, Bar-Ilan University, 52900 Ramat Gan, Israel","institution_ids":["https://openalex.org/I13955877"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001138638","display_name":"Amos Schaffer","orcid":"https://orcid.org/0000-0003-2671-6587"},"institutions":[{"id":"https://openalex.org/I13955877","display_name":"Bar-Ilan University","ror":"https://ror.org/03kgsv495","country_code":"IL","type":"education","lineage":["https://openalex.org/I13955877"]}],"countries":["IL"],"is_corresponding":false,"raw_author_name":"Amos Avraham Schaffer","raw_affiliation_strings":["Mina and Everard Goodman Faculty of Life Sciences, Bar-Ilan University, 52900 Ramat Gan, Israel"],"raw_orcid":"https://orcid.org/0000-0003-2671-6587","affiliations":[{"raw_affiliation_string":"Mina and Everard Goodman Faculty of Life Sciences, Bar-Ilan University, 52900 Ramat Gan, Israel","institution_ids":["https://openalex.org/I13955877"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086235625","display_name":"Tiziana Castrignan\u00f2","orcid":"https://orcid.org/0000-0002-0689-6720"},"institutions":[{"id":"https://openalex.org/I138938424","display_name":"Universit\u00e0 degli Studi della Tuscia","ror":"https://ror.org/03svwq685","country_code":"IT","type":"education","lineage":["https://openalex.org/I138938424"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Tiziana Castrignan\u00f2","raw_affiliation_strings":["Department of Ecological and Biological Sciences (DEB), University of Tuscia, Via S. Camillo de Lellis 44, 01100 Viterbo, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Ecological and Biological Sciences (DEB), University of Tuscia, Via S. Camillo de Lellis 44, 01100 Viterbo, Italy","institution_ids":["https://openalex.org/I138938424"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5053356041","display_name":"Giovanni Chillemi","orcid":"https://orcid.org/0000-0003-3901-6926"},"institutions":[{"id":"https://openalex.org/I138938424","display_name":"Universit\u00e0 degli Studi della Tuscia","ror":"https://ror.org/03svwq685","country_code":"IT","type":"education","lineage":["https://openalex.org/I138938424"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Giovanni Chillemi","raw_affiliation_strings":["Department for Innovation in Biological, Agro-food and Forest systems (DIBAF), University of Tuscia, Via S. Camillo de Lellis 44, 01100 Viterbo, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department for Innovation in Biological, Agro-food and Forest systems (DIBAF), University of Tuscia, Via S. Camillo de Lellis 44, 01100 Viterbo, Italy","institution_ids":["https://openalex.org/I138938424"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005312066","display_name":"Graziano Pesole","orcid":"https://orcid.org/0000-0003-3663-0859"},"institutions":[{"id":"https://openalex.org/I4210140048","display_name":"Istituto Nazionale Biostrutture e Biosistemi","ror":"https://ror.org/043bhwh19","country_code":"IT","type":"other","lineage":["https://openalex.org/I4210140048"]},{"id":"https://openalex.org/I4210148743","display_name":"Institute of Biomembranes, Bioenergetics and Molecular Biotechnologies","ror":"https://ror.org/05nzf7q96","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210148743","https://openalex.org/I4210155236"]},{"id":"https://openalex.org/I4210155236","display_name":"National Research Council","ror":"https://ror.org/04zaypm56","country_code":"IT","type":"nonprofit","lineage":["https://openalex.org/I4210155236"]},{"id":"https://openalex.org/I5561750","display_name":"University of Bari Aldo Moro","ror":"https://ror.org/027ynra39","country_code":"IT","type":"education","lineage":["https://openalex.org/I5561750"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Graziano Pesole","raw_affiliation_strings":["Department of Biosciences, Biotechnologies and Biopharmaceutics (DBBB), University of Bari, Via Orabona 4, 70125 Bari, Italy","Institute of Biomembranes, Bioenergetics and Molecular Biotechnologies (IBIOM), National Research Council, Via Amendola 122/O, 70126 Bari, Italy","National Institute of Biostructures and Biosystems (INBB), 00136 Roma, Italy"],"raw_orcid":"https://orcid.org/0000-0003-3663-0859","affiliations":[{"raw_affiliation_string":"Department of Biosciences, Biotechnologies and Biopharmaceutics (DBBB), University of Bari, Via Orabona 4, 70125 Bari, Italy","institution_ids":["https://openalex.org/I5561750"]},{"raw_affiliation_string":"Institute of Biomembranes, Bioenergetics and Molecular Biotechnologies (IBIOM), National Research Council, Via Amendola 122/O, 70126 Bari, Italy","institution_ids":["https://openalex.org/I4210148743","https://openalex.org/I4210155236"]},{"raw_affiliation_string":"National Institute of Biostructures and Biosystems (INBB), 00136 Roma, Italy","institution_ids":["https://openalex.org/I4210140048"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5087315441","display_name":"Ernesto Picardi","orcid":"https://orcid.org/0000-0002-6549-0114"},"institutions":[{"id":"https://openalex.org/I4210140048","display_name":"Istituto Nazionale Biostrutture e Biosistemi","ror":"https://ror.org/043bhwh19","country_code":"IT","type":"other","lineage":["https://openalex.org/I4210140048"]},{"id":"https://openalex.org/I4210148743","display_name":"Institute of Biomembranes, Bioenergetics and Molecular Biotechnologies","ror":"https://ror.org/05nzf7q96","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210148743","https://openalex.org/I4210155236"]},{"id":"https://openalex.org/I4210155236","display_name":"National Research Council","ror":"https://ror.org/04zaypm56","country_code":"IT","type":"nonprofit","lineage":["https://openalex.org/I4210155236"]},{"id":"https://openalex.org/I5561750","display_name":"University of Bari Aldo Moro","ror":"https://ror.org/027ynra39","country_code":"IT","type":"education","lineage":["https://openalex.org/I5561750"]}],"countries":["IT"],"is_corresponding":true,"raw_author_name":"Ernesto Picardi","raw_affiliation_strings":["Department of Biosciences, Biotechnologies and Biopharmaceutics (DBBB), University of Bari, Via Orabona 4, 70125 Bari, Italy","Institute of Biomembranes, Bioenergetics and Molecular Biotechnologies (IBIOM), National Research Council, Via Amendola 122/O, 70126 Bari, Italy","National Institute of Biostructures and Biosystems (INBB), 00136 Roma, Italy"],"raw_orcid":"https://orcid.org/0000-0002-6549-0114","affiliations":[{"raw_affiliation_string":"Department of Biosciences, Biotechnologies and Biopharmaceutics (DBBB), University of Bari, Via Orabona 4, 70125 Bari, Italy","institution_ids":["https://openalex.org/I5561750"]},{"raw_affiliation_string":"Institute of Biomembranes, Bioenergetics and Molecular Biotechnologies (IBIOM), National Research Council, Via Amendola 122/O, 70126 Bari, Italy","institution_ids":["https://openalex.org/I4210148743","https://openalex.org/I4210155236"]},{"raw_affiliation_string":"National Institute of Biostructures and Biosystems (INBB), 00136 Roma, Italy","institution_ids":["https://openalex.org/I4210140048"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5087315441"],"corresponding_institution_ids":["https://openalex.org/I4210140048","https://openalex.org/I4210148743","https://openalex.org/I4210155236","https://openalex.org/I5561750"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":7.6788,"has_fulltext":true,"cited_by_count":215,"citation_normalized_percentile":{"value":0.98440418,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":100},"biblio":{"volume":"49","issue":"D1","first_page":"D1012","last_page":"D1019"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12610","display_name":"RNA regulation and disease","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12610","display_name":"RNA regulation and disease","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10878","display_name":"CRISPR and Genetic Engineering","score":0.9983999729156494,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10604","display_name":"RNA Research and Splicing","score":0.9973999857902527,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/rna-editing","display_name":"RNA editing","score":0.909493088722229},{"id":"https://openalex.org/keywords/adar","display_name":"ADAR","score":0.8872478008270264},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.8096832036972046},{"id":"https://openalex.org/keywords/transcriptome","display_name":"Transcriptome","score":0.6835739612579346},{"id":"https://openalex.org/keywords/rna","display_name":"RNA","score":0.5827614665031433},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5314884185791016},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.4320727586746216},{"id":"https://openalex.org/keywords/rna-seq","display_name":"RNA-Seq","score":0.4261956512928009},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.3912789821624756},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.36887627840042114},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.2939378023147583}],"concepts":[{"id":"https://openalex.org/C21786251","wikidata":"https://www.wikidata.org/wiki/Q14886350","display_name":"RNA editing","level":4,"score":0.909493088722229},{"id":"https://openalex.org/C2778323267","wikidata":"https://www.wikidata.org/wiki/Q21118028","display_name":"ADAR","level":5,"score":0.8872478008270264},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8096832036972046},{"id":"https://openalex.org/C162317418","wikidata":"https://www.wikidata.org/wiki/Q252857","display_name":"Transcriptome","level":4,"score":0.6835739612579346},{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.5827614665031433},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5314884185791016},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.4320727586746216},{"id":"https://openalex.org/C107397762","wikidata":"https://www.wikidata.org/wiki/Q2542347","display_name":"RNA-Seq","level":5,"score":0.4261956512928009},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.3912789821624756},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.36887627840042114},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.2939378023147583},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D005786","descriptor_name":"Gene Expression Regulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005786","descriptor_name":"Gene Expression Regulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005786","descriptor_name":"Gene Expression Regulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017393","descriptor_name":"RNA Editing","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D017393","descriptor_name":"RNA Editing","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D017393","descriptor_name":"RNA Editing","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D059467","descriptor_name":"Transcriptome","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D059467","descriptor_name":"Transcriptome","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D059467","descriptor_name":"Transcriptome","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D066289","descriptor_name":"Data Curation","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D066289","descriptor_name":"Data Curation","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D066289","descriptor_name":"Data Curation","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1093/nar/gkaa916","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkaa916","pdf_url":"https://academic.oup.com/nar/article-pdf/49/D1/D1012/35364129/gkaa916.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:33104797","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/33104797","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:7778987","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/7778987","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"},{"id":"pmh:oai:art.torvergata.it:2108/397492","is_oa":true,"landing_page_url":"https://hdl.handle.net/2108/397492","pdf_url":null,"source":{"id":"https://openalex.org/S4306400993","display_name":"Cineca Institutional Research Information System (Tor Vergata University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I116067653","host_organization_name":"University of Rome Tor Vergata","host_organization_lineage":["https://openalex.org/I116067653"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:ricerca.uniba.it:11586/351730","is_oa":true,"landing_page_url":"https://hdl.handle.net/11586/351730","pdf_url":null,"source":{"id":"https://openalex.org/S4377196296","display_name":"CINECA IRIS Institutional Research Information System (University of Bari Aldo Moro)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I5561750","host_organization_name":"University of Bari Aldo Moro","host_organization_lineage":["https://openalex.org/I5561750"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nd","license_id":"https://openalex.org/licenses/cc-by-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.1093/nar/gkaa916","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkaa916","pdf_url":"https://academic.oup.com/nar/article-pdf/49/D1/D1012/35364129/gkaa916.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1080279171","display_name":null,"funder_award_id":"2018194670","funder_id":"https://openalex.org/F4320321047","funder_display_name":"Partnership for Advanced Computing in Europe AISBL"},{"id":"https://openalex.org/G4213935265","display_name":null,"funder_award_id":"2016163924","funder_id":"https://openalex.org/F4320321047","funder_display_name":"Partnership for Advanced Computing in Europe AISBL"}],"funders":[{"id":"https://openalex.org/F4320321047","display_name":"Partnership for Advanced Computing in Europe AISBL","ror":"https://ror.org/038j4hz26"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337338","display_name":"National Heart, Lung, and Blood Institute","ror":"https://ror.org/012pb6c26"},{"id":"https://openalex.org/F4320337346","display_name":"National Institute of Mental Health","ror":"https://ror.org/04xeg9z08"},{"id":"https://openalex.org/F4320337347","display_name":"National Institute on Drug Abuse","ror":"https://ror.org/00fq5cm18"},{"id":"https://openalex.org/F4320337348","display_name":"National Human Genome Research Institute","ror":"https://ror.org/00baak391"},{"id":"https://openalex.org/F4320337349","display_name":"NIH Office of the Director","ror":"https://ror.org/00fj8a872"},{"id":"https://openalex.org/F4320337351","display_name":"National Cancer Institute","ror":"https://ror.org/040gcmg81"},{"id":"https://openalex.org/F4320337359","display_name":"National Institute of Neurological Disorders and Stroke","ror":"https://ror.org/01s5ya894"},{"id":"https://openalex.org/F4320338403","display_name":"Common Fund","ror":null}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3094586730.pdf","grobid_xml":"https://content.openalex.org/works/W3094586730.grobid-xml"},"referenced_works_count":43,"referenced_works":["https://openalex.org/W1965089560","https://openalex.org/W1984068087","https://openalex.org/W2040839903","https://openalex.org/W2054584406","https://openalex.org/W2102729801","https://openalex.org/W2103350275","https://openalex.org/W2103441770","https://openalex.org/W2105241705","https://openalex.org/W2106251316","https://openalex.org/W2108234281","https://openalex.org/W2122732537","https://openalex.org/W2138207763","https://openalex.org/W2139581609","https://openalex.org/W2147736027","https://openalex.org/W2164511212","https://openalex.org/W2169456326","https://openalex.org/W2171580148","https://openalex.org/W2173732482","https://openalex.org/W2192293591","https://openalex.org/W2400869935","https://openalex.org/W2470212121","https://openalex.org/W2510286488","https://openalex.org/W2756441483","https://openalex.org/W2762506271","https://openalex.org/W2766697866","https://openalex.org/W2790023094","https://openalex.org/W2796236298","https://openalex.org/W2802497454","https://openalex.org/W2883697525","https://openalex.org/W2898598946","https://openalex.org/W2928944963","https://openalex.org/W2960584468","https://openalex.org/W2969996790","https://openalex.org/W2981114707","https://openalex.org/W2986925253","https://openalex.org/W3003986096","https://openalex.org/W3004607202","https://openalex.org/W3010488797","https://openalex.org/W3023273801","https://openalex.org/W3024172273","https://openalex.org/W3045615987","https://openalex.org/W3080863928","https://openalex.org/W6770216092"],"related_works":["https://openalex.org/W2998988912","https://openalex.org/W2410226897","https://openalex.org/W3027254392","https://openalex.org/W2982292153","https://openalex.org/W3024172273","https://openalex.org/W3102334290","https://openalex.org/W161920910","https://openalex.org/W2762862477","https://openalex.org/W2028415958","https://openalex.org/W1978974023"],"abstract_inverted_index":{"RNA":[0,20,37,76,93,144,180],"editing":[1,21,38,77,94,145,181],"is":[2,22,189],"a":[3,122,152],"relevant":[4],"epitranscriptome":[5],"phenomenon":[6],"able":[7],"to":[8,84,104,156],"increase":[9],"the":[10,43,51,66,75,89,117,127,131,167],"transcriptome":[11,62],"and":[12,82,165],"proteome":[13],"diversity":[14],"of":[15,29,34,45,50,57,74,91,108,130,143],"eukaryotic":[16],"organisms.":[17],"ADAR":[18],"mediated":[19],"widespread":[23],"in":[24,26,42,68,111,161],"humans":[25],"which":[27],"millions":[28,107],"A-to-I":[30,92],"changes":[31,182],"modify":[32],"thousands":[33],"primary":[35],"transcripts.":[36],"has":[39,64],"pivotal":[40],"roles":[41],"regulation":[44],"gene":[46],"expression":[47],"or":[48,55],"modulation":[49],"innate":[52],"immune":[53],"response":[54],"functioning":[56],"several":[58],"neurotransmitter":[59],"receptors.":[60],"Massive":[61],"sequencing":[63],"fostered":[65],"research":[67],"this":[69,172],"field.":[70],"Nonetheless,":[71],"different":[72],"aspects":[73],"biology":[78],"are":[79],"still":[80],"unknown":[81],"need":[83],"be":[85],"elucidated.":[86],"To":[87],"support":[88],"study":[90],"we":[95],"have":[96],"updated":[97],"our":[98],"REDIportal":[99,134,175],"catalogue":[100],"raising":[101],"its":[102],"content":[103],"about":[105],"16":[106],"events":[109,160],"detected":[110],"9642":[112],"human":[113],"RNAseq":[114,149],"samples":[115],"from":[116,171],"GTEx":[118],"project":[119],"by":[120],"using":[121],"dedicated":[123],"pipeline":[124],"based":[125],"on":[126],"HPC":[128],"version":[129],"REDItools":[132],"software.":[133],"now":[135],"allows":[136],"searches":[137],"at":[138,158,192],"sample":[139],"level,":[140],"provides":[141],"overviews":[142],"profiles":[146],"per":[147],"each":[148],"experiment,":[150],"implements":[151],"Gene":[153],"View":[154],"module":[155],"look":[157],"individual":[159],"their":[162],"genic":[163],"context":[164],"hosts":[166],"CLAIRE":[168],"database.":[169],"Starting":[170],"novel":[173],"version,":[174],"will":[176],"start":[177],"collecting":[178],"non-human":[179],"for":[183],"comparative":[184],"genomics":[185],"investigations.":[186],"The":[187],"database":[188],"freely":[190],"available":[191],"http://srv00.recas.ba.infn.it/atlas/index.html.":[193]},"counts_by_year":[{"year":2026,"cited_by_count":18},{"year":2025,"cited_by_count":23},{"year":2024,"cited_by_count":80},{"year":2023,"cited_by_count":41},{"year":2022,"cited_by_count":41},{"year":2021,"cited_by_count":11},{"year":2020,"cited_by_count":1}],"updated_date":"2026-07-22T07:51:19.307946","created_date":"2025-10-10T00:00:00"}
