{"id":"https://openalex.org/W3092539241","doi":"https://doi.org/10.1093/nar/gkaa806","title":"LncSEA: a platform for long non-coding RNA related sets and enrichment analysis","display_name":"LncSEA: a platform for long non-coding RNA related sets and enrichment analysis","publication_year":2020,"publication_date":"2020-09-30","ids":{"openalex":"https://openalex.org/W3092539241","doi":"https://doi.org/10.1093/nar/gkaa806","mag":"3092539241","pmid":"https://pubmed.ncbi.nlm.nih.gov/33045741"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkaa806","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkaa806","pdf_url":"https://academic.oup.com/nar/article-pdf/49/D1/D969/35363764/gkaa806.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/49/D1/D969/35363764/gkaa806.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100360552","display_name":"Jiaxin Chen","orcid":"https://orcid.org/0000-0002-7375-0182"},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jiaxin Chen","raw_affiliation_strings":["School of Medical Informatics, Daqing Campus, Harbin Medical University,\u00a0Daqing 163319, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Medical Informatics, Daqing Campus, Harbin Medical University,\u00a0Daqing 163319, China","institution_ids":["https://openalex.org/I156144747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100409879","display_name":"Jian Zhang","orcid":"https://orcid.org/0000-0001-7217-0111"},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jian Zhang","raw_affiliation_strings":["School of Medical Informatics, Daqing Campus, Harbin Medical University,\u00a0Daqing 163319, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Medical Informatics, Daqing Campus, Harbin Medical University,\u00a0Daqing 163319, China","institution_ids":["https://openalex.org/I156144747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004535291","display_name":"Yu Gao","orcid":"https://orcid.org/0000-0001-5090-8250"},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yu Gao","raw_affiliation_strings":["School of Medical Informatics, Daqing Campus, Harbin Medical University,\u00a0Daqing 163319, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Medical Informatics, Daqing Campus, Harbin Medical University,\u00a0Daqing 163319, China","institution_ids":["https://openalex.org/I156144747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101470623","display_name":"Yanyu Li","orcid":"https://orcid.org/0000-0002-1416-9216"},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yanyu Li","raw_affiliation_strings":["School of Medical Informatics, Daqing Campus, Harbin Medical University,\u00a0Daqing 163319, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Medical Informatics, Daqing Campus, Harbin Medical University,\u00a0Daqing 163319, China","institution_ids":["https://openalex.org/I156144747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074727448","display_name":"Chenchen Feng","orcid":"https://orcid.org/0000-0002-1854-356X"},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Chenchen Feng","raw_affiliation_strings":["School of Medical Informatics, Daqing Campus, Harbin Medical University,\u00a0Daqing 163319, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Medical Informatics, Daqing Campus, Harbin Medical University,\u00a0Daqing 163319, China","institution_ids":["https://openalex.org/I156144747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101406915","display_name":"Chao Song","orcid":"https://orcid.org/0000-0003-0611-4298"},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Chao Song","raw_affiliation_strings":["Department of Pharmacology, Daqing Campus, Harbin Medical University,\u00a0Daqing 163319, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Pharmacology, Daqing Campus, Harbin Medical University,\u00a0Daqing 163319, China","institution_ids":["https://openalex.org/I156144747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065296916","display_name":"Ziyu Ning","orcid":"https://orcid.org/0000-0001-7183-5281"},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Ziyu Ning","raw_affiliation_strings":["School of Medical Informatics, Daqing Campus, Harbin Medical University,\u00a0Daqing 163319, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Medical Informatics, Daqing Campus, Harbin Medical University,\u00a0Daqing 163319, China","institution_ids":["https://openalex.org/I156144747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025214572","display_name":"Xinyuan Zhou","orcid":"https://orcid.org/0000-0002-1374-8240"},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xinyuan Zhou","raw_affiliation_strings":["School of Medical Informatics, Daqing Campus, Harbin Medical University,\u00a0Daqing 163319, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Medical Informatics, Daqing Campus, Harbin Medical University,\u00a0Daqing 163319, China","institution_ids":["https://openalex.org/I156144747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103931021","display_name":"Jianmei Zhao","orcid":null},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jianmei Zhao","raw_affiliation_strings":["School of Medical Informatics, Daqing Campus, Harbin Medical University,\u00a0Daqing 163319, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Medical Informatics, Daqing Campus, Harbin Medical University,\u00a0Daqing 163319, China","institution_ids":["https://openalex.org/I156144747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5112572759","display_name":"Minghong Feng","orcid":null},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Minghong Feng","raw_affiliation_strings":["School of Medical Informatics, Daqing Campus, Harbin Medical University,\u00a0Daqing 163319, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Medical Informatics, Daqing Campus, Harbin Medical University,\u00a0Daqing 163319, China","institution_ids":["https://openalex.org/I156144747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100762148","display_name":"Yuexin Zhang","orcid":"https://orcid.org/0000-0002-3882-7041"},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yuexin Zhang","raw_affiliation_strings":["School of Medical Informatics, Daqing Campus, Harbin Medical University,\u00a0Daqing 163319, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Medical Informatics, Daqing Campus, Harbin Medical University,\u00a0Daqing 163319, China","institution_ids":["https://openalex.org/I156144747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100616109","display_name":"Ling Wei","orcid":"https://orcid.org/0000-0003-0328-0821"},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Ling Wei","raw_affiliation_strings":["School of Medical Informatics, Daqing Campus, Harbin Medical University,\u00a0Daqing 163319, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Medical Informatics, Daqing Campus, Harbin Medical University,\u00a0Daqing 163319, China","institution_ids":["https://openalex.org/I156144747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100778410","display_name":"Qi Pan","orcid":"https://orcid.org/0000-0003-2543-2937"},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qi Pan","raw_affiliation_strings":["School of Medical Informatics, Daqing Campus, Harbin Medical University,\u00a0Daqing 163319, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Medical Informatics, Daqing Campus, Harbin Medical University,\u00a0Daqing 163319, China","institution_ids":["https://openalex.org/I156144747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101656020","display_name":"Yong Jiang","orcid":"https://orcid.org/0000-0002-0163-5089"},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yong Jiang","raw_affiliation_strings":["School of Medical Informatics, Daqing Campus, Harbin Medical University,\u00a0Daqing 163319, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Medical Informatics, Daqing Campus, Harbin Medical University,\u00a0Daqing 163319, China","institution_ids":["https://openalex.org/I156144747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5022537385","display_name":"Fengcui Qian","orcid":"https://orcid.org/0000-0003-3817-4690"},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Fengcui Qian","raw_affiliation_strings":["School of Medical Informatics, Daqing Campus, Harbin Medical University,\u00a0Daqing 163319, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Medical Informatics, Daqing Campus, Harbin Medical University,\u00a0Daqing 163319, China","institution_ids":["https://openalex.org/I156144747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5050941029","display_name":"Junwei Han","orcid":"https://orcid.org/0000-0002-3276-0819"},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Junwei Han","raw_affiliation_strings":["College of Bioinformatics Science and Technology, Harbin Medical University, Harbin 150081, China"],"raw_orcid":"https://orcid.org/0000-0002-3276-0819","affiliations":[{"raw_affiliation_string":"College of Bioinformatics Science and Technology, Harbin Medical University, Harbin 150081, China","institution_ids":["https://openalex.org/I156144747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026750847","display_name":"Yongsan Yang","orcid":null},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yongsan Yang","raw_affiliation_strings":["School of Medical Informatics, Daqing Campus, Harbin Medical University,\u00a0Daqing 163319, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Medical Informatics, Daqing Campus, Harbin Medical University,\u00a0Daqing 163319, China","institution_ids":["https://openalex.org/I156144747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5115694793","display_name":"Qiuyu Wang","orcid":"https://orcid.org/0009-0006-9422-7223"},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qiuyu Wang","raw_affiliation_strings":["School of Medical Informatics, Daqing Campus, Harbin Medical University,\u00a0Daqing 163319, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Medical Informatics, Daqing Campus, Harbin Medical University,\u00a0Daqing 163319, China","institution_ids":["https://openalex.org/I156144747"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100728506","display_name":"Chunquan Li","orcid":"https://orcid.org/0000-0002-4700-5496"},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Chunquan Li","raw_affiliation_strings":["School of Medical Informatics, Daqing Campus, Harbin Medical University,\u00a0Daqing 163319, China"],"raw_orcid":"https://orcid.org/0000-0002-4700-5496","affiliations":[{"raw_affiliation_string":"School of Medical Informatics, Daqing Campus, Harbin Medical University,\u00a0Daqing 163319, China","institution_ids":["https://openalex.org/I156144747"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":19,"corresponding_author_ids":["https://openalex.org/A5100728506"],"corresponding_institution_ids":["https://openalex.org/I156144747"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":8.5133,"has_fulltext":true,"cited_by_count":152,"citation_normalized_percentile":{"value":0.98878457,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":100},"biblio":{"volume":"49","issue":"D1","first_page":"D969","last_page":"D980"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9832000136375427,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10604","display_name":"RNA Research and Splicing","score":0.9703999757766724,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.949756383895874},{"id":"https://openalex.org/keywords/rna","display_name":"RNA","score":0.516360878944397},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5065368413925171},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.4595431685447693},{"id":"https://openalex.org/keywords/coding","display_name":"Coding (social sciences)","score":0.45212414860725403},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.18050327897071838},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.1754704713821411}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.949756383895874},{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.516360878944397},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5065368413925171},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.4595431685447693},{"id":"https://openalex.org/C179518139","wikidata":"https://www.wikidata.org/wiki/Q5140297","display_name":"Coding (social sciences)","level":2,"score":0.45212414860725403},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.18050327897071838},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.1754704713821411},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D005786","descriptor_name":"Gene Expression Regulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005786","descriptor_name":"Gene Expression Regulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005786","descriptor_name":"Gene Expression Regulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012045","descriptor_name":"Regulatory Sequences, Nucleic Acid","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012045","descriptor_name":"Regulatory Sequences, Nucleic Acid","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012045","descriptor_name":"Regulatory Sequences, Nucleic Acid","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D062085","descriptor_name":"RNA, Long Noncoding","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D062085","descriptor_name":"RNA, Long Noncoding","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D062085","descriptor_name":"RNA, Long Noncoding","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/nar/gkaa806","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkaa806","pdf_url":"https://academic.oup.com/nar/article-pdf/49/D1/D969/35363764/gkaa806.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:33045741","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/33045741","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:7778898","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/7778898","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkaa806","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkaa806","pdf_url":"https://academic.oup.com/nar/article-pdf/49/D1/D969/35363764/gkaa806.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1892655915","display_name":null,"funder_award_id":"DQWLD201703","funder_id":"https://openalex.org/F4320312270","funder_display_name":"Harbin Medical University"},{"id":"https://openalex.org/G6300355325","display_name":null,"funder_award_id":"YQ2019C013","funder_id":"https://openalex.org/F4320323085","funder_display_name":"Natural Science Foundation of Heilongjiang Province"},{"id":"https://openalex.org/G6326061351","display_name":null,"funder_award_id":"61601150","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G7396411992","display_name":null,"funder_award_id":"YQ2019C013","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G8092982729","display_name":null,"funder_award_id":"81572341","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320312270","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583"},{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320323085","display_name":"Natural Science Foundation of Heilongjiang Province","ror":null}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3092539241.pdf","grobid_xml":"https://content.openalex.org/works/W3092539241.grobid-xml"},"referenced_works_count":92,"referenced_works":["https://openalex.org/W1996207018","https://openalex.org/W1999746344","https://openalex.org/W2002136401","https://openalex.org/W2010457001","https://openalex.org/W2012935431","https://openalex.org/W2018838463","https://openalex.org/W2029919331","https://openalex.org/W2031697084","https://openalex.org/W2035618305","https://openalex.org/W2045546866","https://openalex.org/W2055043387","https://openalex.org/W2060484997","https://openalex.org/W2084160423","https://openalex.org/W2085220756","https://openalex.org/W2089790639","https://openalex.org/W2094678200","https://openalex.org/W2102619694","https://openalex.org/W2117977572","https://openalex.org/W2122683221","https://openalex.org/W2124985265","https://openalex.org/W2152463875","https://openalex.org/W2153268494","https://openalex.org/W2171808845","https://openalex.org/W2176096567","https://openalex.org/W2180674495","https://openalex.org/W2223740898","https://openalex.org/W2248907500","https://openalex.org/W2259938310","https://openalex.org/W2262709833","https://openalex.org/W2343700030","https://openalex.org/W2398241271","https://openalex.org/W2414666198","https://openalex.org/W2415300897","https://openalex.org/W2507410655","https://openalex.org/W2508362099","https://openalex.org/W2524206229","https://openalex.org/W2534008312","https://openalex.org/W2537453540","https://openalex.org/W2544405043","https://openalex.org/W2558692177","https://openalex.org/W2567665210","https://openalex.org/W2582554428","https://openalex.org/W2606172339","https://openalex.org/W2735687500","https://openalex.org/W2741504317","https://openalex.org/W2741977902","https://openalex.org/W2742867475","https://openalex.org/W2761699988","https://openalex.org/W2765372324","https://openalex.org/W2766273910","https://openalex.org/W2767061187","https://openalex.org/W2767918570","https://openalex.org/W2770089238","https://openalex.org/W2770170730","https://openalex.org/W2782258988","https://openalex.org/W2782800598","https://openalex.org/W2785545196","https://openalex.org/W2805684402","https://openalex.org/W2808950870","https://openalex.org/W2889051002","https://openalex.org/W2895456557","https://openalex.org/W2895679848","https://openalex.org/W2898215009","https://openalex.org/W2898942820","https://openalex.org/W2899028887","https://openalex.org/W2899830787","https://openalex.org/W2900310474","https://openalex.org/W2900841953","https://openalex.org/W2902312348","https://openalex.org/W2907584383","https://openalex.org/W2937857319","https://openalex.org/W2941993016","https://openalex.org/W2946859327","https://openalex.org/W2968777178","https://openalex.org/W2979844864","https://openalex.org/W2982420272","https://openalex.org/W2982780080","https://openalex.org/W2993866155","https://openalex.org/W2994725160","https://openalex.org/W3000568989","https://openalex.org/W3007397831","https://openalex.org/W3013192308","https://openalex.org/W3027546887","https://openalex.org/W3028372147","https://openalex.org/W6712555329","https://openalex.org/W6725105739","https://openalex.org/W6728609114","https://openalex.org/W6733457798","https://openalex.org/W6745121010","https://openalex.org/W6745921721","https://openalex.org/W6757767093","https://openalex.org/W6769703726"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2082860237","https://openalex.org/W2119695867","https://openalex.org/W2130076355","https://openalex.org/W1990804418","https://openalex.org/W1993764875","https://openalex.org/W2046158694","https://openalex.org/W2788277189","https://openalex.org/W2013243191","https://openalex.org/W1971568933"],"abstract_inverted_index":{"Long":[0],"non-coding":[1],"RNAs":[2],"(lncRNAs)":[3],"have":[4],"been":[5],"proven":[6],"to":[7,61],"play":[8],"important":[9],"roles":[10],"in":[11],"transcriptional":[12],"processes":[13],"and":[14,73,76,91,94,127,137,145,155,176,180],"various":[15],"biological":[16],"functions.":[17],"Establishing":[18],"a":[19,52,63,115,162,167],"comprehensive":[20],"collection":[21],"of":[22,44,66,118,148,169,171],"human":[23,53,70],"lncRNA":[24,33,42,54,71,85,104,119,149,172,178],"sets":[25,55,72,87,105,120,150,173],"is":[26,161,186],"urgent":[27],"work":[28],"at":[29,189],"present.":[30],"Using":[31],"reference":[32,86],"sets,":[34],"enrichment":[35,77,146,181],"analyses":[36,78,147],"will":[37],"be":[38],"useful":[39],"for":[40,69,79,174],"analyzing":[41],"lists":[43],"interest":[45],"submitted":[46],"by":[47,122,131],"users.":[48],"Therefore,":[49],"we":[50],"developed":[51],"database,":[56],"called":[57],"LncSEA,":[58],"which":[59],"aimed":[60],"document":[62],"large":[64,116],"number":[65,117],"available":[67],"resources":[68],"provide":[74],"annotation":[75,144],"lncRNAs.":[80,99],"LncSEA":[81,142,160,184],"supports":[82,177],">40":[83],"000":[84,98],"across":[88],"18":[89],"categories":[90],"66":[92],"sub-categories,":[93],"covers":[95],"over":[96],"50":[97],"We":[100],"not":[101],"only":[102],"collected":[103],"based":[106],"on":[107],"downstream":[108,156],"regulatory":[109,129],"data":[110],"sources,":[111],"but":[112],"also":[113],"identified":[114],"regulated":[121],"upstream":[123,153],"transcription":[124],"factors":[125],"(TFs)":[126],"DNA":[128],"elements":[130],"integrating":[132],"TF":[133],"ChIP-seq,":[134],"DNase-seq,":[135],"ATAC-seq":[136],"H3K27ac":[138],"ChIP-seq":[139],"data.":[140],"Importantly,":[141],"provides":[143,166],"associated":[151],"with":[152],"regulators":[154],"targets.":[157],"In":[158],"summary,":[159],"powerful":[163],"platform":[164],"that":[165],"variety":[168],"types":[170],"users,":[175],"annotations":[179],"analyses.":[182],"The":[183],"database":[185],"freely":[187],"accessible":[188],"http://bio.liclab.net/LncSEA/index.php.":[190]},"counts_by_year":[{"year":2026,"cited_by_count":5},{"year":2025,"cited_by_count":15},{"year":2024,"cited_by_count":30},{"year":2023,"cited_by_count":64},{"year":2022,"cited_by_count":28},{"year":2021,"cited_by_count":9},{"year":2020,"cited_by_count":1}],"updated_date":"2026-06-25T08:15:23.626066","created_date":"2025-10-10T00:00:00"}