{"id":"https://openalex.org/W3024375027","doi":"https://doi.org/10.1093/nar/gkaa327","title":"PaccMann: a web service for interpretable anticancer compound sensitivity prediction","display_name":"PaccMann: a web service for interpretable anticancer compound sensitivity prediction","publication_year":2020,"publication_date":"2020-04-22","ids":{"openalex":"https://openalex.org/W3024375027","doi":"https://doi.org/10.1093/nar/gkaa327","mag":"3024375027","pmid":"https://pubmed.ncbi.nlm.nih.gov/32402082"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkaa327","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkaa327","pdf_url":"https://academic.oup.com/nar/article-pdf/48/W1/W502/33433085/gkaa327.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","datacite","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/48/W1/W502/33433085/gkaa327.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5029512323","display_name":"Joris Cadow","orcid":"https://orcid.org/0000-0002-4410-2805"},"institutions":[{"id":"https://openalex.org/I4210126328","display_name":"IBM Research - Zurich","ror":"https://ror.org/02js37d36","country_code":"CH","type":"facility","lineage":["https://openalex.org/I1341412227","https://openalex.org/I4210114115","https://openalex.org/I4210126328"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Joris Cadow","raw_affiliation_strings":["Computational Systems Biology Group, IBM Research Europe, S\u00e4umerstrasse 4, R\u00fcschlikon, 8803, Switzerland"],"raw_orcid":"https://orcid.org/0000-0002-4410-2805","affiliations":[{"raw_affiliation_string":"Computational Systems Biology Group, IBM Research Europe, S\u00e4umerstrasse 4, R\u00fcschlikon, 8803, Switzerland","institution_ids":["https://openalex.org/I4210126328"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002562002","display_name":"Jannis Born","orcid":"https://orcid.org/0000-0001-8307-5670"},"institutions":[{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]},{"id":"https://openalex.org/I4210126328","display_name":"IBM Research - Zurich","ror":"https://ror.org/02js37d36","country_code":"CH","type":"facility","lineage":["https://openalex.org/I1341412227","https://openalex.org/I4210114115","https://openalex.org/I4210126328"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Jannis Born","raw_affiliation_strings":["Computational Systems Biology Group, IBM Research Europe, S\u00e4umerstrasse 4, R\u00fcschlikon, 8803, Switzerland","Machine Learning\u00a0& Computational Biology Lab, D-BSSE, ETH Z\u00fcrich,\u00a0Mattenstrasse 26, Basel, 4058, Switzerland"],"raw_orcid":"https://orcid.org/0000-0001-8307-5670","affiliations":[{"raw_affiliation_string":"Computational Systems Biology Group, IBM Research Europe, S\u00e4umerstrasse 4, R\u00fcschlikon, 8803, Switzerland","institution_ids":["https://openalex.org/I4210126328"]},{"raw_affiliation_string":"Machine Learning\u00a0& Computational Biology Lab, D-BSSE, ETH Z\u00fcrich,\u00a0Mattenstrasse 26, Basel, 4058, Switzerland","institution_ids":["https://openalex.org/I35440088"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005561269","display_name":"Matteo Manica","orcid":"https://orcid.org/0000-0002-8872-0269"},"institutions":[{"id":"https://openalex.org/I4210126328","display_name":"IBM Research - Zurich","ror":"https://ror.org/02js37d36","country_code":"CH","type":"facility","lineage":["https://openalex.org/I1341412227","https://openalex.org/I4210114115","https://openalex.org/I4210126328"]}],"countries":["CH"],"is_corresponding":true,"raw_author_name":"Matteo Manica","raw_affiliation_strings":["Computational Systems Biology Group, IBM Research Europe, S\u00e4umerstrasse 4, R\u00fcschlikon, 8803, Switzerland"],"raw_orcid":"https://orcid.org/0000-0002-8872-0269","affiliations":[{"raw_affiliation_string":"Computational Systems Biology Group, IBM Research Europe, S\u00e4umerstrasse 4, R\u00fcschlikon, 8803, Switzerland","institution_ids":["https://openalex.org/I4210126328"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033795780","display_name":"Ali Oskooei","orcid":"https://orcid.org/0000-0002-8318-687X"},"institutions":[{"id":"https://openalex.org/I4210126328","display_name":"IBM Research - Zurich","ror":"https://ror.org/02js37d36","country_code":"CH","type":"facility","lineage":["https://openalex.org/I1341412227","https://openalex.org/I4210114115","https://openalex.org/I4210126328"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Ali Oskooei","raw_affiliation_strings":["Computational Systems Biology Group, IBM Research Europe, S\u00e4umerstrasse 4, R\u00fcschlikon, 8803, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computational Systems Biology Group, IBM Research Europe, S\u00e4umerstrasse 4, R\u00fcschlikon, 8803, Switzerland","institution_ids":["https://openalex.org/I4210126328"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5016524881","display_name":"Mar\u00eda Rodr\u00edguez Mart\u00ednez","orcid":"https://orcid.org/0000-0003-3766-4233"},"institutions":[{"id":"https://openalex.org/I4210126328","display_name":"IBM Research - Zurich","ror":"https://ror.org/02js37d36","country_code":"CH","type":"facility","lineage":["https://openalex.org/I1341412227","https://openalex.org/I4210114115","https://openalex.org/I4210126328"]}],"countries":["CH"],"is_corresponding":true,"raw_author_name":"Mar\u00eda Rodr\u00edguez\u00a0Mart\u00ednez","raw_affiliation_strings":["Computational Systems Biology Group, IBM Research Europe, S\u00e4umerstrasse 4, R\u00fcschlikon, 8803, Switzerland"],"raw_orcid":"https://orcid.org/0000-0003-3766-4233","affiliations":[{"raw_affiliation_string":"Computational Systems Biology Group, IBM Research Europe, S\u00e4umerstrasse 4, R\u00fcschlikon, 8803, Switzerland","institution_ids":["https://openalex.org/I4210126328"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5005561269","https://openalex.org/A5016524881"],"corresponding_institution_ids":["https://openalex.org/I4210126328"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":6.5548,"has_fulltext":true,"cited_by_count":83,"citation_normalized_percentile":{"value":0.97221019,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":100},"biblio":{"volume":"48","issue":"W1","first_page":"W502","last_page":"W508"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9961000084877014,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10252","display_name":"Microbial Natural Products and Biosynthesis","score":0.9896000027656555,"subfield":{"id":"https://openalex.org/subfields/2736","display_name":"Pharmacology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/interpretability","display_name":"Interpretability","score":0.7328553199768066},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.5840035676956177},{"id":"https://openalex.org/keywords/sensitivity","display_name":"Sensitivity (control systems)","score":0.5813077092170715},{"id":"https://openalex.org/keywords/in-silico","display_name":"In silico","score":0.5690211653709412},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.5300944447517395},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.501401424407959},{"id":"https://openalex.org/keywords/drug","display_name":"Drug","score":0.48074865341186523},{"id":"https://openalex.org/keywords/web-service","display_name":"Web service","score":0.4573177695274353},{"id":"https://openalex.org/keywords/toolbox","display_name":"Toolbox","score":0.4571714997291565},{"id":"https://openalex.org/keywords/service","display_name":"Service (business)","score":0.4256621301174164},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3910504877567291},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.37420451641082764},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3572554290294647},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3515086770057678},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.18744590878486633},{"id":"https://openalex.org/keywords/pharmacology","display_name":"Pharmacology","score":0.1383320391178131},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.10236963629722595}],"concepts":[{"id":"https://openalex.org/C2781067378","wikidata":"https://www.wikidata.org/wiki/Q17027399","display_name":"Interpretability","level":2,"score":0.7328553199768066},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.5840035676956177},{"id":"https://openalex.org/C21200559","wikidata":"https://www.wikidata.org/wiki/Q7451068","display_name":"Sensitivity (control systems)","level":2,"score":0.5813077092170715},{"id":"https://openalex.org/C2775905019","wikidata":"https://www.wikidata.org/wiki/Q192572","display_name":"In silico","level":3,"score":0.5690211653709412},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.5300944447517395},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.501401424407959},{"id":"https://openalex.org/C2780035454","wikidata":"https://www.wikidata.org/wiki/Q8386","display_name":"Drug","level":2,"score":0.48074865341186523},{"id":"https://openalex.org/C35578498","wikidata":"https://www.wikidata.org/wiki/Q193424","display_name":"Web service","level":2,"score":0.4573177695274353},{"id":"https://openalex.org/C2777655017","wikidata":"https://www.wikidata.org/wiki/Q1501161","display_name":"Toolbox","level":2,"score":0.4571714997291565},{"id":"https://openalex.org/C2780378061","wikidata":"https://www.wikidata.org/wiki/Q25351891","display_name":"Service (business)","level":2,"score":0.4256621301174164},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3910504877567291},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.37420451641082764},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3572554290294647},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3515086770057678},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.18744590878486633},{"id":"https://openalex.org/C98274493","wikidata":"https://www.wikidata.org/wiki/Q128406","display_name":"Pharmacology","level":1,"score":0.1383320391178131},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.10236963629722595},{"id":"https://openalex.org/C136264566","wikidata":"https://www.wikidata.org/wiki/Q159810","display_name":"Economy","level":1,"score":0.0},{"id":"https://openalex.org/C24326235","wikidata":"https://www.wikidata.org/wiki/Q126095","display_name":"Electronic engineering","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000970","descriptor_name":"Antineoplastic Agents","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":false},{"descriptor_ui":"D000970","descriptor_name":"Antineoplastic Agents","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":false},{"descriptor_ui":"D000970","descriptor_name":"Antineoplastic Agents","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":false},{"descriptor_ui":"D000970","descriptor_name":"Antineoplastic Agents","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":false},{"descriptor_ui":"D000970","descriptor_name":"Antineoplastic Agents","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D000970","descriptor_name":"Antineoplastic Agents","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D000970","descriptor_name":"Antineoplastic Agents","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D000970","descriptor_name":"Antineoplastic Agents","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020123","descriptor_name":"Sirolimus","qualifier_ui":"Q000031","qualifier_name":"analogs & derivatives","is_major_topic":false},{"descriptor_ui":"D020123","descriptor_name":"Sirolimus","qualifier_ui":"Q000031","qualifier_name":"analogs & derivatives","is_major_topic":false},{"descriptor_ui":"D020123","descriptor_name":"Sirolimus","qualifier_ui":"Q000031","qualifier_name":"analogs & derivatives","is_major_topic":false},{"descriptor_ui":"D020123","descriptor_name":"Sirolimus","qualifier_ui":"Q000031","qualifier_name":"analogs & derivatives","is_major_topic":false},{"descriptor_ui":"D020123","descriptor_name":"Sirolimus","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":false},{"descriptor_ui":"D020123","descriptor_name":"Sirolimus","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":false},{"descriptor_ui":"D020123","descriptor_name":"Sirolimus","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":false},{"descriptor_ui":"D020123","descriptor_name":"Sirolimus","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058492","descriptor_name":"Drug Repositioning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058492","descriptor_name":"Drug Repositioning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058492","descriptor_name":"Drug Repositioning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058492","descriptor_name":"Drug Repositioning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":6,"locations":[{"id":"doi:10.1093/nar/gkaa327","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkaa327","pdf_url":"https://academic.oup.com/nar/article-pdf/48/W1/W502/33433085/gkaa327.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:32402082","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/32402082","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:www.research-collection.ethz.ch:20.500.11850/425389","is_oa":false,"landing_page_url":"http://hdl.handle.net/20.500.11850/425389","pdf_url":null,"source":{"id":"https://openalex.org/S4306402302","display_name":"Repository for Publications and Research Data (ETH Zurich)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I35440088","host_organization_name":"ETH Zurich","host_organization_lineage":["https://openalex.org/I35440088"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research, 48 (W1)","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:pubmedcentral.nih.gov:7319576","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/7319576","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"},{"id":"pmh:oai:zenodo.org:3935564","is_oa":true,"landing_page_url":"https://zenodo.org/record/3935564","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Research 48 502-508","raw_type":"info:eu-repo/semantics/article"},{"id":"doi:10.3929/ethz-b-000425389","is_oa":true,"landing_page_url":"https://doi.org/10.3929/ethz-b-000425389","pdf_url":null,"source":{"id":"https://openalex.org/S7407051236","display_name":"ETH Z\u00fcrich Research Collection","issn_l":null,"issn":[],"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"article-journal"}],"best_oa_location":{"id":"doi:10.1093/nar/gkaa327","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkaa327","pdf_url":"https://academic.oup.com/nar/article-pdf/48/W1/W502/33433085/gkaa327.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/16","score":0.4399999976158142,"display_name":"Peace, Justice and strong institutions"}],"awards":[{"id":"https://openalex.org/G3022581309","display_name":null,"funder_award_id":"826121","funder_id":"https://openalex.org/F4320337664","funder_display_name":"H2020 Societal Challenges"},{"id":"https://openalex.org/G675428038","display_name":null,"funder_award_id":"826121","funder_id":"https://openalex.org/F4320332999","funder_display_name":"Horizon 2020 Framework Programme"}],"funders":[{"id":"https://openalex.org/F4320332999","display_name":"Horizon 2020 Framework Programme","ror":"https://ror.org/00k4n6c32"},{"id":"https://openalex.org/F4320337664","display_name":"H2020 Societal Challenges","ror":null}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3024375027.pdf","grobid_xml":"https://content.openalex.org/works/W3024375027.grobid-xml"},"referenced_works_count":50,"referenced_works":["https://openalex.org/W1969157667","https://openalex.org/W1975147762","https://openalex.org/W1983478747","https://openalex.org/W2014080468","https://openalex.org/W2043398720","https://openalex.org/W2094176583","https://openalex.org/W2096173332","https://openalex.org/W2107665951","https://openalex.org/W2108068107","https://openalex.org/W2108933868","https://openalex.org/W2113305329","https://openalex.org/W2129860849","https://openalex.org/W2157319908","https://openalex.org/W2217850171","https://openalex.org/W2345356016","https://openalex.org/W2345888787","https://openalex.org/W2508320259","https://openalex.org/W2517827643","https://openalex.org/W2559466477","https://openalex.org/W2579217144","https://openalex.org/W2604296437","https://openalex.org/W2605336808","https://openalex.org/W2612690371","https://openalex.org/W2775061087","https://openalex.org/W2789816271","https://openalex.org/W2790808809","https://openalex.org/W2791066888","https://openalex.org/W2807463161","https://openalex.org/W2863599854","https://openalex.org/W2901246787","https://openalex.org/W2907759401","https://openalex.org/W2914584698","https://openalex.org/W2926923741","https://openalex.org/W2942173509","https://openalex.org/W2945199349","https://openalex.org/W2950860419","https://openalex.org/W2954628922","https://openalex.org/W2973039076","https://openalex.org/W2981712100","https://openalex.org/W2982894044","https://openalex.org/W2992909282","https://openalex.org/W3000348967","https://openalex.org/W3019676419","https://openalex.org/W3103171309","https://openalex.org/W4230274588","https://openalex.org/W6617145748","https://openalex.org/W6735443497","https://openalex.org/W6736161267","https://openalex.org/W6756216553","https://openalex.org/W6757619437"],"related_works":["https://openalex.org/W2905433371","https://openalex.org/W2888392564","https://openalex.org/W4310278675","https://openalex.org/W4388422664","https://openalex.org/W4390569940","https://openalex.org/W4361193272","https://openalex.org/W2963326959","https://openalex.org/W4388685194","https://openalex.org/W4312407344","https://openalex.org/W2894289927"],"abstract_inverted_index":{"The":[0],"identification":[1,196],"of":[2,16,20,35,38,44,59,166],"new":[3],"targeted":[4],"and":[5,13,81,85,121,138,151,171,187],"personalized":[6],"therapies":[7],"for":[8,56,135,185],"cancer":[9],"requires":[10],"the":[11,17,33,42,57,95,149,164,167,172,180],"fast":[12,186],"accurate":[14],"assessment":[15],"drug":[18,46,82,91,105,119,191],"efficacy":[19,47,124],"potential":[21],"compounds":[22],"against":[23],"a":[24,45,53,103,160,183],"particular":[25],"biomolecular":[26],"sample.":[27],"It":[28],"has":[29],"been":[30],"suggested":[31],"that":[32,147,154],"integration":[34],"complementary":[36],"sources":[37],"information":[39,80],"might":[40],"strengthen":[41],"accuracy":[43],"prediction":[48],"model.":[49],"Here,":[50],"we":[51],"present":[52],"web-based":[54],"platform":[55],"Prediction":[58],"AntiCancer":[60],"Compound":[61],"sensitivity":[62,83,92],"with":[63,182],"Multimodal":[64],"Attention-based":[65],"Neural":[66],"Networks":[67],"(PaccMann).":[68],"PaccMann":[69,132],"is":[70],"trained":[71],"on":[72,89,125],"public":[73],"transcriptomic":[74,130],"cell":[75],"line":[76],"profiles,":[77],"compound":[78,106,111,123,195],"structure":[79,112],"screenings,":[84],"outperforms":[86],"state-of-the-art":[87],"methods":[88,134],"anticancer":[90],"prediction.":[93],"On":[94],"open-access":[96],"web":[97],"service":[98],"(https://ibm.biz/paccmann-aas),":[99],"users":[100],"can":[101],"select":[102],"known":[104],"or":[107,128,193],"design":[108],"their":[109],"own":[110],"in":[113,190],"an":[114],"interactive":[115],"editor,":[116],"perform":[117],"in-silico":[118],"testing":[120],"investigate":[122],"publicly":[126],"available":[127],"user-provided":[129],"profiles.":[131],"leverages":[133],"model":[136],"interpretability":[137],"outputs":[139],"confidence":[140],"scores":[141],"as":[142,144],"well":[143],"attention":[145],"heatmaps":[146],"highlight":[148],"genes":[150],"chemical":[152],"sub-structures":[153],"were":[155],"more":[156],"important":[157],"to":[158,178],"make":[159],"prediction,":[161],"hence":[162],"facilitating":[163],"understanding":[165],"model's":[168],"decision":[169],"making":[170],"involved":[173],"biochemical":[174],"processes.":[175],"We":[176],"hope":[177],"serve":[179],"community":[181],"toolbox":[184],"efficient":[188],"validation":[189],"repositioning":[192],"lead":[194],"regimes.":[197]},"counts_by_year":[{"year":2026,"cited_by_count":9},{"year":2025,"cited_by_count":16},{"year":2024,"cited_by_count":13},{"year":2023,"cited_by_count":10},{"year":2022,"cited_by_count":14},{"year":2021,"cited_by_count":20},{"year":2020,"cited_by_count":1}],"updated_date":"2026-06-06T09:05:17.133730","created_date":"2025-10-10T00:00:00"}
