{"id":"https://openalex.org/W3103119004","doi":"https://doi.org/10.1093/nar/gkaa1020","title":"TISCH: a comprehensive web resource enabling interactive single-cell transcriptome visualization of tumor microenvironment","display_name":"TISCH: a comprehensive web resource enabling interactive single-cell transcriptome visualization of tumor microenvironment","publication_year":2020,"publication_date":"2020-10-16","ids":{"openalex":"https://openalex.org/W3103119004","doi":"https://doi.org/10.1093/nar/gkaa1020","mag":"3103119004","pmid":"https://pubmed.ncbi.nlm.nih.gov/33179754"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkaa1020","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkaa1020","pdf_url":"https://academic.oup.com/nar/article-pdf/49/D1/D1420/35364368/gkaa1020.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/49/D1/D1420/35364368/gkaa1020.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5089037972","display_name":"Dongqing Sun","orcid":"https://orcid.org/0009-0007-7302-1880"},"institutions":[{"id":"https://openalex.org/I116953780","display_name":"Tongji University","ror":"https://ror.org/03rc6as71","country_code":"CN","type":"education","lineage":["https://openalex.org/I116953780"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Dongqing Sun","raw_affiliation_strings":["Shanghai Putuo District People's Hospital, School of Life Science and Technology, Tongji University, Shanghai 200060, China"],"affiliations":[{"raw_affiliation_string":"Shanghai Putuo District People's Hospital, School of Life Science and Technology, Tongji University, Shanghai 200060, China","institution_ids":["https://openalex.org/I116953780"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100786107","display_name":"Jin Wang","orcid":"https://orcid.org/0000-0002-1695-4875"},"institutions":[{"id":"https://openalex.org/I116953780","display_name":"Tongji University","ror":"https://ror.org/03rc6as71","country_code":"CN","type":"education","lineage":["https://openalex.org/I116953780"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jin Wang","raw_affiliation_strings":["Shanghai Putuo District People's Hospital, School of Life Science and Technology, Tongji University, Shanghai 200060, China"],"affiliations":[{"raw_affiliation_string":"Shanghai Putuo District People's Hospital, School of Life Science and Technology, Tongji University, Shanghai 200060, China","institution_ids":["https://openalex.org/I116953780"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037008390","display_name":"Ya Han","orcid":"https://orcid.org/0000-0003-1892-4239"},"institutions":[{"id":"https://openalex.org/I116953780","display_name":"Tongji University","ror":"https://ror.org/03rc6as71","country_code":"CN","type":"education","lineage":["https://openalex.org/I116953780"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Ya Han","raw_affiliation_strings":["Shanghai Putuo District People's Hospital, School of Life Science and Technology, Tongji University, Shanghai 200060, China"],"affiliations":[{"raw_affiliation_string":"Shanghai Putuo District People's Hospital, School of Life Science and Technology, Tongji University, Shanghai 200060, China","institution_ids":["https://openalex.org/I116953780"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008230312","display_name":"Xin Dong","orcid":"https://orcid.org/0000-0002-7112-0224"},"institutions":[{"id":"https://openalex.org/I116953780","display_name":"Tongji University","ror":"https://ror.org/03rc6as71","country_code":"CN","type":"education","lineage":["https://openalex.org/I116953780"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xin Dong","raw_affiliation_strings":["Shanghai Putuo District People's Hospital, School of Life Science and Technology, Tongji University, Shanghai 200060, China"],"affiliations":[{"raw_affiliation_string":"Shanghai Putuo District People's Hospital, School of Life Science and Technology, Tongji University, Shanghai 200060, China","institution_ids":["https://openalex.org/I116953780"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5114473393","display_name":"Jun Ge","orcid":"https://orcid.org/0000-0003-3391-790X"},"institutions":[{"id":"https://openalex.org/I116953780","display_name":"Tongji University","ror":"https://ror.org/03rc6as71","country_code":"CN","type":"education","lineage":["https://openalex.org/I116953780"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jun Ge","raw_affiliation_strings":["Shanghai Putuo District People's Hospital, School of Life Science and Technology, Tongji University, Shanghai 200060, China"],"affiliations":[{"raw_affiliation_string":"Shanghai Putuo District People's Hospital, School of Life Science and Technology, Tongji University, Shanghai 200060, China","institution_ids":["https://openalex.org/I116953780"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008039836","display_name":"Rongbin Zheng","orcid":"https://orcid.org/0000-0001-9928-2463"},"institutions":[{"id":"https://openalex.org/I116953780","display_name":"Tongji University","ror":"https://ror.org/03rc6as71","country_code":"CN","type":"education","lineage":["https://openalex.org/I116953780"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Rongbin Zheng","raw_affiliation_strings":["Shanghai Putuo District People's Hospital, School of Life Science and Technology, Tongji University, Shanghai 200060, China"],"affiliations":[{"raw_affiliation_string":"Shanghai Putuo District People's Hospital, School of Life Science and Technology, Tongji University, Shanghai 200060, China","institution_ids":["https://openalex.org/I116953780"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102984265","display_name":"Xiaoying Shi","orcid":null},"institutions":[{"id":"https://openalex.org/I116953780","display_name":"Tongji University","ror":"https://ror.org/03rc6as71","country_code":"CN","type":"education","lineage":["https://openalex.org/I116953780"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiaoying Shi","raw_affiliation_strings":["Shanghai Putuo District People's Hospital, School of Life Science and Technology, Tongji University, Shanghai 200060, China"],"affiliations":[{"raw_affiliation_string":"Shanghai Putuo District People's Hospital, School of Life Science and Technology, Tongji University, Shanghai 200060, China","institution_ids":["https://openalex.org/I116953780"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100415584","display_name":"Binbin Wang","orcid":"https://orcid.org/0000-0003-2885-6428"},"institutions":[{"id":"https://openalex.org/I116953780","display_name":"Tongji University","ror":"https://ror.org/03rc6as71","country_code":"CN","type":"education","lineage":["https://openalex.org/I116953780"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Binbin Wang","raw_affiliation_strings":["Shanghai Putuo District People's Hospital, School of Life Science and Technology, Tongji University, Shanghai 200060, China"],"affiliations":[{"raw_affiliation_string":"Shanghai Putuo District People's Hospital, School of Life Science and Technology, Tongji University, Shanghai 200060, China","institution_ids":["https://openalex.org/I116953780"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100389141","display_name":"Ziyi Li","orcid":"https://orcid.org/0000-0003-0947-9137"},"institutions":[{"id":"https://openalex.org/I116953780","display_name":"Tongji University","ror":"https://ror.org/03rc6as71","country_code":"CN","type":"education","lineage":["https://openalex.org/I116953780"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Ziyi Li","raw_affiliation_strings":["Shanghai Putuo District People's Hospital, School of Life Science and Technology, Tongji University, Shanghai 200060, China"],"affiliations":[{"raw_affiliation_string":"Shanghai Putuo District People's Hospital, School of Life Science and Technology, Tongji University, Shanghai 200060, China","institution_ids":["https://openalex.org/I116953780"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101992976","display_name":"Pengfei Ren","orcid":"https://orcid.org/0000-0002-1085-6756"},"institutions":[{"id":"https://openalex.org/I116953780","display_name":"Tongji University","ror":"https://ror.org/03rc6as71","country_code":"CN","type":"education","lineage":["https://openalex.org/I116953780"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Pengfei Ren","raw_affiliation_strings":["Shanghai Putuo District People's Hospital, School of Life Science and Technology, Tongji University, Shanghai 200060, China"],"affiliations":[{"raw_affiliation_string":"Shanghai Putuo District People's Hospital, School of Life Science and Technology, Tongji University, Shanghai 200060, China","institution_ids":["https://openalex.org/I116953780"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101178553","display_name":"Liangdong Sun","orcid":null},"institutions":[{"id":"https://openalex.org/I116953780","display_name":"Tongji University","ror":"https://ror.org/03rc6as71","country_code":"CN","type":"education","lineage":["https://openalex.org/I116953780"]},{"id":"https://openalex.org/I4210127126","display_name":"Shanghai Pulmonary Hospital","ror":"https://ror.org/033nbnf69","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210127126"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Liangdong Sun","raw_affiliation_strings":["Department of Thoracic Surgery, Shanghai Pulmonary Hospital, School of Medicine, Tongji University, Shanghai 200433, China"],"affiliations":[{"raw_affiliation_string":"Department of Thoracic Surgery, Shanghai Pulmonary Hospital, School of Medicine, Tongji University, Shanghai 200433, China","institution_ids":["https://openalex.org/I4210127126","https://openalex.org/I116953780"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5104272903","display_name":"Yilv Yan","orcid":null},"institutions":[{"id":"https://openalex.org/I116953780","display_name":"Tongji University","ror":"https://ror.org/03rc6as71","country_code":"CN","type":"education","lineage":["https://openalex.org/I116953780"]},{"id":"https://openalex.org/I4210127126","display_name":"Shanghai Pulmonary Hospital","ror":"https://ror.org/033nbnf69","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210127126"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yilv Yan","raw_affiliation_strings":["Department of Thoracic Surgery, Shanghai Pulmonary Hospital, School of Medicine, Tongji University, Shanghai 200433, China"],"affiliations":[{"raw_affiliation_string":"Department of Thoracic Surgery, Shanghai Pulmonary Hospital, School of Medicine, Tongji University, Shanghai 200433, China","institution_ids":["https://openalex.org/I4210127126","https://openalex.org/I116953780"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100364222","display_name":"Peng Zhang","orcid":"https://orcid.org/0000-0003-1771-7545"},"institutions":[{"id":"https://openalex.org/I116953780","display_name":"Tongji University","ror":"https://ror.org/03rc6as71","country_code":"CN","type":"education","lineage":["https://openalex.org/I116953780"]},{"id":"https://openalex.org/I4210127126","display_name":"Shanghai Pulmonary Hospital","ror":"https://ror.org/033nbnf69","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210127126"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Peng Zhang","raw_affiliation_strings":["Department of Thoracic Surgery, Shanghai Pulmonary Hospital, School of Medicine, Tongji University, Shanghai 200433, China"],"affiliations":[{"raw_affiliation_string":"Department of Thoracic Surgery, Shanghai Pulmonary Hospital, School of Medicine, Tongji University, Shanghai 200433, China","institution_ids":["https://openalex.org/I4210127126","https://openalex.org/I116953780"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100403583","display_name":"Fan Zhang","orcid":"https://orcid.org/0000-0003-4340-3435"},"institutions":[{"id":"https://openalex.org/I116953780","display_name":"Tongji University","ror":"https://ror.org/03rc6as71","country_code":"CN","type":"education","lineage":["https://openalex.org/I116953780"]},{"id":"https://openalex.org/I4210127126","display_name":"Shanghai Pulmonary Hospital","ror":"https://ror.org/033nbnf69","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210127126"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Fan Zhang","raw_affiliation_strings":["Clinical Translational Research Center, Shanghai Pulmonary Hospital, School of Life Science, Tongji University,\u00a0Shanghai 200433, China"],"affiliations":[{"raw_affiliation_string":"Clinical Translational Research Center, Shanghai Pulmonary Hospital, School of Life Science, Tongji University,\u00a0Shanghai 200433, China","institution_ids":["https://openalex.org/I4210127126","https://openalex.org/I116953780"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036664787","display_name":"Taiwen Li","orcid":"https://orcid.org/0000-0001-7940-8196"},"institutions":[{"id":"https://openalex.org/I200296433","display_name":"Chinese Academy of Medical Sciences & Peking Union Medical College","ror":"https://ror.org/02drdmm93","country_code":"CN","type":"education","lineage":["https://openalex.org/I200296433"]},{"id":"https://openalex.org/I24185976","display_name":"Sichuan University","ror":"https://ror.org/011ashp19","country_code":"CN","type":"education","lineage":["https://openalex.org/I24185976"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Taiwen Li","raw_affiliation_strings":["State Key Laboratory of Oral Diseases, National Clinical Research Center for Oral Diseases, Chinese Academy of Medical Sciences Research Unit of Oral Carcinogenesis and Management, West China Hospital of Stomatology, Sichuan University,\u00a0Chengdu, Sichuan 610041, China"],"affiliations":[{"raw_affiliation_string":"State Key Laboratory of Oral Diseases, National Clinical Research Center for Oral Diseases, Chinese Academy of Medical Sciences Research Unit of Oral Carcinogenesis and Management, West China Hospital of Stomatology, Sichuan University,\u00a0Chengdu, Sichuan 610041, China","institution_ids":["https://openalex.org/I24185976","https://openalex.org/I200296433"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5065580689","display_name":"Chenfei Wang","orcid":"https://orcid.org/0000-0001-7573-3768"},"institutions":[{"id":"https://openalex.org/I116953780","display_name":"Tongji University","ror":"https://ror.org/03rc6as71","country_code":"CN","type":"education","lineage":["https://openalex.org/I116953780"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Chenfei Wang","raw_affiliation_strings":["Shanghai Putuo District People's Hospital, School of Life Science and Technology, Tongji University, Shanghai 200060, China"],"affiliations":[{"raw_affiliation_string":"Shanghai Putuo District People's Hospital, School of Life Science and Technology, Tongji University, Shanghai 200060, China","institution_ids":["https://openalex.org/I116953780"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":16,"corresponding_author_ids":["https://openalex.org/A5036664787","https://openalex.org/A5065580689","https://openalex.org/A5100403583"],"corresponding_institution_ids":["https://openalex.org/I116953780","https://openalex.org/I200296433","https://openalex.org/I24185976","https://openalex.org/I4210127126"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":46.6457,"has_fulltext":true,"cited_by_count":1139,"citation_normalized_percentile":{"value":0.99930674,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":99,"max":100},"biblio":{"volume":"49","issue":"D1","first_page":"D1420","last_page":"D1430"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.996399998664856,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11287","display_name":"Cancer Genomics and Diagnostics","score":0.9937999844551086,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.9183733463287354},{"id":"https://openalex.org/keywords/transcriptome","display_name":"Transcriptome","score":0.6426587104797363},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.5852860808372498},{"id":"https://openalex.org/keywords/resource","display_name":"Resource (disambiguation)","score":0.5602006912231445},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.517013430595398},{"id":"https://openalex.org/keywords/tumor-microenvironment","display_name":"Tumor microenvironment","score":0.4386703670024872},{"id":"https://openalex.org/keywords/cell-biology","display_name":"Cell biology","score":0.3803277611732483},{"id":"https://openalex.org/keywords/tumor-cells","display_name":"Tumor cells","score":0.2823745310306549},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.22113758325576782},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.1791604459285736},{"id":"https://openalex.org/keywords/cancer-research","display_name":"Cancer research","score":0.15955650806427002},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.12086102366447449},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.08801344037055969},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.084084153175354}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.9183733463287354},{"id":"https://openalex.org/C162317418","wikidata":"https://www.wikidata.org/wiki/Q252857","display_name":"Transcriptome","level":4,"score":0.6426587104797363},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.5852860808372498},{"id":"https://openalex.org/C206345919","wikidata":"https://www.wikidata.org/wiki/Q20380951","display_name":"Resource (disambiguation)","level":2,"score":0.5602006912231445},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.517013430595398},{"id":"https://openalex.org/C2776107976","wikidata":"https://www.wikidata.org/wiki/Q1786433","display_name":"Tumor microenvironment","level":3,"score":0.4386703670024872},{"id":"https://openalex.org/C95444343","wikidata":"https://www.wikidata.org/wiki/Q7141","display_name":"Cell biology","level":1,"score":0.3803277611732483},{"id":"https://openalex.org/C3020616263","wikidata":"https://www.wikidata.org/wiki/Q1216998","display_name":"Tumor cells","level":2,"score":0.2823745310306549},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.22113758325576782},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.1791604459285736},{"id":"https://openalex.org/C502942594","wikidata":"https://www.wikidata.org/wiki/Q3421914","display_name":"Cancer research","level":1,"score":0.15955650806427002},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.12086102366447449},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.08801344037055969},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.084084153175354},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000970","descriptor_name":"Antineoplastic Agents","qualifier_ui":"Q000627","qualifier_name":"therapeutic use","is_major_topic":false},{"descriptor_ui":"D000970","descriptor_name":"Antineoplastic Agents","qualifier_ui":"Q000627","qualifier_name":"therapeutic use","is_major_topic":false},{"descriptor_ui":"D000970","descriptor_name":"Antineoplastic Agents","qualifier_ui":"Q000627","qualifier_name":"therapeutic use","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007113","descriptor_name":"Immunity, Innate","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007113","descriptor_name":"Immunity, Innate","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007113","descriptor_name":"Immunity, Innate","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007167","descriptor_name":"Immunotherapy","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D007167","descriptor_name":"Immunotherapy","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D007167","descriptor_name":"Immunotherapy","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000628","qualifier_name":"therapy","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000628","qualifier_name":"therapy","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000628","qualifier_name":"therapy","is_major_topic":false},{"descriptor_ui":"D011786","descriptor_name":"Quality Control","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011786","descriptor_name":"Quality Control","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011786","descriptor_name":"Quality Control","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014407","descriptor_name":"Tumor Cells, Cultured","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014407","descriptor_name":"Tumor Cells, Cultured","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014407","descriptor_name":"Tumor Cells, Cultured","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018740","descriptor_name":"Genetic Heterogeneity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018740","descriptor_name":"Genetic Heterogeneity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018740","descriptor_name":"Genetic Heterogeneity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059010","descriptor_name":"Single-Cell Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D059010","descriptor_name":"Single-Cell Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D059010","descriptor_name":"Single-Cell Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059016","descriptor_name":"Tumor Microenvironment","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":false},{"descriptor_ui":"D059016","descriptor_name":"Tumor Microenvironment","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":false},{"descriptor_ui":"D059016","descriptor_name":"Tumor Microenvironment","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":false},{"descriptor_ui":"D059016","descriptor_name":"Tumor Microenvironment","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D059016","descriptor_name":"Tumor Microenvironment","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D059016","descriptor_name":"Tumor Microenvironment","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D059016","descriptor_name":"Tumor Microenvironment","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D059016","descriptor_name":"Tumor Microenvironment","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D059016","descriptor_name":"Tumor Microenvironment","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D059467","descriptor_name":"Transcriptome","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D059467","descriptor_name":"Transcriptome","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D059467","descriptor_name":"Transcriptome","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D066264","descriptor_name":"Datasets as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D066264","descriptor_name":"Datasets as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D066264","descriptor_name":"Datasets as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/nar/gkaa1020","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkaa1020","pdf_url":"https://academic.oup.com/nar/article-pdf/49/D1/D1420/35364368/gkaa1020.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:33179754","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/33179754","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:7778907","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/7778907","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkaa1020","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkaa1020","pdf_url":"https://academic.oup.com/nar/article-pdf/49/D1/D1420/35364368/gkaa1020.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1462225413","display_name":null,"funder_award_id":"81972551","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G2087396116","display_name":null,"funder_award_id":"China","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3317480652","display_name":null,"funder_award_id":"Science","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3621861859","display_name":null,"funder_award_id":"81702701","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G5198483871","display_name":null,"funder_award_id":"31801059","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G5994120800","display_name":null,"funder_award_id":"Natural","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3103119004.pdf","grobid_xml":"https://content.openalex.org/works/W3103119004.grobid-xml"},"referenced_works_count":44,"referenced_works":["https://openalex.org/W1617145133","https://openalex.org/W1985987855","https://openalex.org/W2030017878","https://openalex.org/W2045949302","https://openalex.org/W2066671159","https://openalex.org/W2109890799","https://openalex.org/W2118258530","https://openalex.org/W2123106337","https://openalex.org/W2130410032","https://openalex.org/W2159482845","https://openalex.org/W2214074259","https://openalex.org/W2332292689","https://openalex.org/W2406250479","https://openalex.org/W2550291749","https://openalex.org/W2560367415","https://openalex.org/W2578841491","https://openalex.org/W2606112621","https://openalex.org/W2624831627","https://openalex.org/W2626653156","https://openalex.org/W2765472239","https://openalex.org/W2771542157","https://openalex.org/W2775437905","https://openalex.org/W2783406084","https://openalex.org/W2794480084","https://openalex.org/W2808837841","https://openalex.org/W2810097927","https://openalex.org/W2865352686","https://openalex.org/W2897044695","https://openalex.org/W2898120081","https://openalex.org/W2898321887","https://openalex.org/W2899145148","https://openalex.org/W2902652978","https://openalex.org/W2931036699","https://openalex.org/W2949177718","https://openalex.org/W2961304458","https://openalex.org/W2966465234","https://openalex.org/W2982521190","https://openalex.org/W3015184839","https://openalex.org/W3016360824","https://openalex.org/W3021646013","https://openalex.org/W3047725782","https://openalex.org/W4255758041","https://openalex.org/W4294216483","https://openalex.org/W6769775530"],"related_works":["https://openalex.org/W2399513595","https://openalex.org/W4388386498","https://openalex.org/W2068608913","https://openalex.org/W2028462563","https://openalex.org/W2982720988","https://openalex.org/W3150324899","https://openalex.org/W3124914020","https://openalex.org/W4388725868","https://openalex.org/W2104762330","https://openalex.org/W4379374180"],"abstract_inverted_index":{"Cancer":[0],"immunotherapy":[1],"targeting":[2],"co-inhibitory":[3],"pathways":[4],"by":[5],"checkpoint":[6],"blockade":[7],"shows":[8],"remarkable":[9],"efficacy":[10],"in":[11,37,49,177],"a":[12,19,76,106,165],"variety":[13],"of":[14,21,31,44,85,190],"cancer":[15,97,182],"types.":[16,98],"However,":[17],"only":[18],"minority":[20],"patients":[22],"respond":[23],"to":[24,27,63],"treatment":[25,153],"due":[26],"the":[28,45,59,100,138,178,191],"stochastic":[29],"heterogeneity":[30,48],"tumor":[32,93],"microenvironment":[33],"(TME).":[34],"Recent":[35],"advances":[36],"single-cell":[38,82,139],"RNA-seq":[39],"technologies":[40],"enabled":[41],"comprehensive":[42,188],"characterization":[43],"immune":[46],"system":[47],"tumors":[50],"but":[51],"posed":[52],"computational":[53],"challenges":[54],"on":[55],"integrating":[56],"and":[57,124,154,157,172,187],"utilizing":[58],"massive":[60],"published":[61],"datasets":[62,94,136],"inform":[64],"immunotherapy.":[65],"Here,":[66],"we":[67],"present":[68],"Tumor":[69],"Immune":[70],"Single":[71],"Cell":[72],"Hub":[73],"(TISCH,":[74],"http://tisch.comp-genomics.org),":[75],"large-scale":[77],"curated":[78],"database":[79],"that":[80],"integrates":[81],"transcriptomic":[83],"profiles":[84],"nearly":[86],"2":[87],"million":[88],"cells":[89],"from":[90,180],"76":[91],"high-quality":[92],"across":[95,134],"27":[96],"All":[99],"data":[101],"were":[102],"uniformly":[103],"processed":[104],"with":[105],"standardized":[107],"workflow,":[108],"including":[109],"quality":[110],"control,":[111],"batch":[112],"effect":[113],"removal,":[114],"clustering,":[115],"cell-type":[116],"annotation,":[117],"malignant":[118],"cell":[119],"classification,":[120],"differential":[121],"expression":[122,132,175],"analysis":[123],"functional":[125],"enrichment":[126],"analysis.":[127],"TISCH":[128,163],"provides":[129,164],"interactive":[130],"gene":[131,174],"visualization":[133],"multiple":[135,181],"at":[137],"level":[140],"or":[141],"cluster":[142],"level,":[143],"allowing":[144],"systematic":[145],"comparison":[146],"between":[147],"different":[148,159],"cell-types,":[149],"patients,":[150],"tissue":[151],"origins,":[152],"response":[155],"groups,":[156],"even":[158],"cancer-types.":[160],"In":[161],"summary,":[162],"user-friendly":[166],"interface":[167],"for":[168],"systematically":[169],"visualizing,":[170],"searching":[171],"downloading":[173],"atlas":[176],"TME":[179],"types,":[183],"enabling":[184],"fast,":[185],"flexible":[186],"exploration":[189],"TME.":[192]},"counts_by_year":[{"year":2026,"cited_by_count":35},{"year":2025,"cited_by_count":188},{"year":2024,"cited_by_count":391},{"year":2023,"cited_by_count":292},{"year":2022,"cited_by_count":177},{"year":2021,"cited_by_count":55}],"updated_date":"2026-04-14T08:04:32.555800","created_date":"2025-10-10T00:00:00"}
