{"id":"https://openalex.org/W3104062656","doi":"https://doi.org/10.1093/nar/gkaa1009","title":"OrthoDB in 2020: evolutionary and functional annotations of orthologs","display_name":"OrthoDB in 2020: evolutionary and functional annotations of orthologs","publication_year":2020,"publication_date":"2020-10-29","ids":{"openalex":"https://openalex.org/W3104062656","doi":"https://doi.org/10.1093/nar/gkaa1009","mag":"3104062656","pmid":"https://pubmed.ncbi.nlm.nih.gov/33196836"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkaa1009","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkaa1009","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1093/nar/gkaa1009","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5029893038","display_name":"Evgeny M. Zdobnov","orcid":"https://orcid.org/0000-0002-5178-1498"},"institutions":[{"id":"https://openalex.org/I114457229","display_name":"University of Geneva","ror":"https://ror.org/01swzsf04","country_code":"CH","type":"education","lineage":["https://openalex.org/I114457229"]},{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]}],"countries":["CH"],"is_corresponding":true,"raw_author_name":"Evgeny M Zdobnov","raw_affiliation_strings":["Department of Genetic Medicine and Development, University of Geneva Medical School, rue Michel-Servet 1, 1211 Geneva, Switzerland, and Swiss Institute of Bioinformatics, rue Michel-Servet 1, 1211 Geneva, Switzerland"],"affiliations":[{"raw_affiliation_string":"Department of Genetic Medicine and Development, University of Geneva Medical School, rue Michel-Servet 1, 1211 Geneva, Switzerland, and Swiss Institute of Bioinformatics, rue Michel-Servet 1, 1211 Geneva, Switzerland","institution_ids":["https://openalex.org/I12708293","https://openalex.org/I114457229"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023325161","display_name":"Dmitry Kuznetsov","orcid":"https://orcid.org/0000-0002-9972-947X"},"institutions":[{"id":"https://openalex.org/I114457229","display_name":"University of Geneva","ror":"https://ror.org/01swzsf04","country_code":"CH","type":"education","lineage":["https://openalex.org/I114457229"]},{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Dmitry Kuznetsov","raw_affiliation_strings":["Department of Genetic Medicine and Development, University of Geneva Medical School, rue Michel-Servet 1, 1211 Geneva, Switzerland, and Swiss Institute of Bioinformatics, rue Michel-Servet 1, 1211 Geneva, Switzerland"],"affiliations":[{"raw_affiliation_string":"Department of Genetic Medicine and Development, University of Geneva Medical School, rue Michel-Servet 1, 1211 Geneva, Switzerland, and Swiss Institute of Bioinformatics, rue Michel-Servet 1, 1211 Geneva, Switzerland","institution_ids":["https://openalex.org/I12708293","https://openalex.org/I114457229"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039659389","display_name":"Fredrik Tegenfeldt","orcid":null},"institutions":[{"id":"https://openalex.org/I114457229","display_name":"University of Geneva","ror":"https://ror.org/01swzsf04","country_code":"CH","type":"education","lineage":["https://openalex.org/I114457229"]},{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Fredrik Tegenfeldt","raw_affiliation_strings":["Department of Genetic Medicine and Development, University of Geneva Medical School, rue Michel-Servet 1, 1211 Geneva, Switzerland, and Swiss Institute of Bioinformatics, rue Michel-Servet 1, 1211 Geneva, Switzerland"],"affiliations":[{"raw_affiliation_string":"Department of Genetic Medicine and Development, University of Geneva Medical School, rue Michel-Servet 1, 1211 Geneva, Switzerland, and Swiss Institute of Bioinformatics, rue Michel-Servet 1, 1211 Geneva, Switzerland","institution_ids":["https://openalex.org/I12708293","https://openalex.org/I114457229"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5081797576","display_name":"Mos\u00e8 Manni","orcid":"https://orcid.org/0000-0002-4146-6523"},"institutions":[{"id":"https://openalex.org/I114457229","display_name":"University of Geneva","ror":"https://ror.org/01swzsf04","country_code":"CH","type":"education","lineage":["https://openalex.org/I114457229"]},{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Mos\u00e8 Manni","raw_affiliation_strings":["Department of Genetic Medicine and Development, University of Geneva Medical School, rue Michel-Servet 1, 1211 Geneva, Switzerland, and Swiss Institute of Bioinformatics, rue Michel-Servet 1, 1211 Geneva, Switzerland"],"affiliations":[{"raw_affiliation_string":"Department of Genetic Medicine and Development, University of Geneva Medical School, rue Michel-Servet 1, 1211 Geneva, Switzerland, and Swiss Institute of Bioinformatics, rue Michel-Servet 1, 1211 Geneva, Switzerland","institution_ids":["https://openalex.org/I12708293","https://openalex.org/I114457229"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027383242","display_name":"Matthew Berkeley","orcid":"https://orcid.org/0000-0002-1973-2100"},"institutions":[{"id":"https://openalex.org/I114457229","display_name":"University of Geneva","ror":"https://ror.org/01swzsf04","country_code":"CH","type":"education","lineage":["https://openalex.org/I114457229"]},{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Matthew Berkeley","raw_affiliation_strings":["Department of Genetic Medicine and Development, University of Geneva Medical School, rue Michel-Servet 1, 1211 Geneva, Switzerland, and Swiss Institute of Bioinformatics, rue Michel-Servet 1, 1211 Geneva, Switzerland"],"affiliations":[{"raw_affiliation_string":"Department of Genetic Medicine and Development, University of Geneva Medical School, rue Michel-Servet 1, 1211 Geneva, Switzerland, and Swiss Institute of Bioinformatics, rue Michel-Servet 1, 1211 Geneva, Switzerland","institution_ids":["https://openalex.org/I12708293","https://openalex.org/I114457229"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5038335924","display_name":"Evgenia V. Kriventseva","orcid":"https://orcid.org/0000-0003-4835-7562"},"institutions":[{"id":"https://openalex.org/I114457229","display_name":"University of Geneva","ror":"https://ror.org/01swzsf04","country_code":"CH","type":"education","lineage":["https://openalex.org/I114457229"]},{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]}],"countries":["CH"],"is_corresponding":true,"raw_author_name":"Evgenia V Kriventseva","raw_affiliation_strings":["Department of Genetic Medicine and Development, University of Geneva Medical School, rue Michel-Servet 1, 1211 Geneva, Switzerland, and Swiss Institute of Bioinformatics, rue Michel-Servet 1, 1211 Geneva, Switzerland"],"affiliations":[{"raw_affiliation_string":"Department of Genetic Medicine and Development, University of Geneva Medical School, rue Michel-Servet 1, 1211 Geneva, Switzerland, and Swiss Institute of Bioinformatics, rue Michel-Servet 1, 1211 Geneva, Switzerland","institution_ids":["https://openalex.org/I12708293","https://openalex.org/I114457229"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5029893038","https://openalex.org/A5038335924"],"corresponding_institution_ids":["https://openalex.org/I114457229","https://openalex.org/I12708293"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":8.5935,"has_fulltext":false,"cited_by_count":197,"citation_normalized_percentile":{"value":0.98618772,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":99,"max":100},"biblio":{"volume":"49","issue":"D1","first_page":"D389","last_page":"D393"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.9950000047683716,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12167","display_name":"Bacterial Identification and Susceptibility Testing","score":0.989799976348877,"subfield":{"id":"https://openalex.org/subfields/1308","display_name":"Clinical Biochemistry"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.7283469438552856},{"id":"https://openalex.org/keywords/phyletic-gradualism","display_name":"Phyletic gradualism","score":0.5668820738792419},{"id":"https://openalex.org/keywords/upload","display_name":"Upload","score":0.5168060064315796},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.5017096996307373},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.44562143087387085},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.4451415538787842},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.37530815601348877},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.2761766314506531},{"id":"https://openalex.org/keywords/phylogenetics","display_name":"Phylogenetics","score":0.26725611090660095},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.19584432244300842},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.1405896544456482}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7283469438552856},{"id":"https://openalex.org/C150078595","wikidata":"https://www.wikidata.org/wiki/Q1158802","display_name":"Phyletic gradualism","level":4,"score":0.5668820738792419},{"id":"https://openalex.org/C71901391","wikidata":"https://www.wikidata.org/wiki/Q7126699","display_name":"Upload","level":2,"score":0.5168060064315796},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.5017096996307373},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.44562143087387085},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.4451415538787842},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.37530815601348877},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.2761766314506531},{"id":"https://openalex.org/C90132467","wikidata":"https://www.wikidata.org/wiki/Q171184","display_name":"Phylogenetics","level":3,"score":0.26725611090660095},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.19584432244300842},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.1405896544456482},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012689","descriptor_name":"Sequence Homology, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012689","descriptor_name":"Sequence Homology, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012689","descriptor_name":"Sequence Homology, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019143","descriptor_name":"Evolution, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019143","descriptor_name":"Evolution, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019143","descriptor_name":"Evolution, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1093/nar/gkaa1009","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkaa1009","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:33196836","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/33196836","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:europepmc.org:6699104","is_oa":true,"landing_page_url":"http://europepmc.org/pmc/articles/PMC7779051","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:7779051","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/7779051","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkaa1009","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkaa1009","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.5299999713897705,"display_name":"Life below water","id":"https://metadata.un.org/sdg/14"}],"awards":[{"id":"https://openalex.org/G6152065128","display_name":null,"funder_award_id":"310030_189062","funder_id":"https://openalex.org/F4320320924","funder_display_name":"Schweizerischer Nationalfonds zur F\u00f6rderung der Wissenschaftlichen Forschung"}],"funders":[{"id":"https://openalex.org/F4320320924","display_name":"Schweizerischer Nationalfonds zur F\u00f6rderung der Wissenschaftlichen Forschung","ror":"https://ror.org/00yjd3n13"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":32,"referenced_works":["https://openalex.org/W1842639876","https://openalex.org/W1973810564","https://openalex.org/W1990453950","https://openalex.org/W2030317329","https://openalex.org/W2030530458","https://openalex.org/W2041386815","https://openalex.org/W2102344709","https://openalex.org/W2109368213","https://openalex.org/W2114676910","https://openalex.org/W2127012419","https://openalex.org/W2136632285","https://openalex.org/W2138181932","https://openalex.org/W2142678031","https://openalex.org/W2145100181","https://openalex.org/W2159266221","https://openalex.org/W2162151166","https://openalex.org/W2162528766","https://openalex.org/W2173732482","https://openalex.org/W2223752691","https://openalex.org/W2559011563","https://openalex.org/W2755432955","https://openalex.org/W2766510537","https://openalex.org/W2897805491","https://openalex.org/W2899600207","https://openalex.org/W2900359059","https://openalex.org/W2950150251","https://openalex.org/W2950595506","https://openalex.org/W2950954328","https://openalex.org/W2951257985","https://openalex.org/W3136918052","https://openalex.org/W4236459334","https://openalex.org/W6683686091"],"related_works":["https://openalex.org/W3003677946","https://openalex.org/W1989673003","https://openalex.org/W4230830896","https://openalex.org/W2572701497","https://openalex.org/W2094155803","https://openalex.org/W1967863842","https://openalex.org/W2275882902","https://openalex.org/W116826819","https://openalex.org/W4250670713","https://openalex.org/W1996681309"],"abstract_inverted_index":{"OrthoDB":[0,16,56,146,163,178,210],"provides":[1,57],"evolutionary":[2,201,205],"and":[3,22,29,31,126,138,160,173,198,207],"functional":[4,136,196],"annotations":[5,137,172,202],"of":[6,13,26,34,66,87,102,111,118,151,164,170,175,187],"orthologs,":[7,112,152],"inferred":[8],"for":[9,149],"a":[10,64,71,84,93,130],"vast":[11],"number":[12],"available":[14,195],"organisms.":[15],"is":[17,36,154],"leading":[18],"in":[19,48,54,142],"the":[20,32,51,61,100,134,139,184],"coverage":[21,186],"genomic":[23],"diversity":[24],"sampling":[25,33],"Eukaryotes,":[27],"Prokaryotes":[28],"Viruses,":[30],"Bacteria":[35],"further":[37],"set":[38],"to":[39,50,70,78,96,107,162,180,192,199],"increase":[40],"three-fold.":[41],"The":[42,145],"user":[43,72],"interface":[44],"has":[45],"been":[46],"enhanced":[47],"response":[49],"massive":[52],"growth":[53],"data.":[55],"three":[58],"views":[59],"on":[60],"data:":[62],"(i)":[63],"list":[65],"orthologous":[67,89],"groups":[68,110],"related":[69,171],"query,":[73],"which":[74],"are":[75],"now":[76,91],"arranged":[77],"visualize":[79],"their":[80],"hierarchical":[81],"relations,":[82],"(ii)":[83],"detailed":[85],"view":[86],"an":[88,116,121],"group,":[90],"featuring":[92],"Sankey":[94],"diagram":[95],"facilitate":[97],"navigation":[98],"between":[99],"levels":[101],"orthology,":[103],"from":[104,183,224],"more":[105,108],"finely-resolved":[106],"general":[109],"as":[113,115,189,191,204],"well":[114,190],"arrangement":[117],"orthologs":[119,141,182],"into":[120],"interactive":[122,168],"organism":[123],"taxonomy":[124],"structure,":[125],"(iii)":[127],"we":[128],"added":[129],"gene-centric":[131],"view,":[132],"showing":[133],"gene":[135],"pair-wise":[140],"example":[143],"species.":[144],"standalone":[147],"software":[148],"delineation":[150],"Orthologer,":[153],"freely":[155],"available.":[156],"Online":[157],"BUSCO":[158],"assessments":[159],"mapping":[161],"user-uploaded":[165],"data":[166,211],"enable":[167],"exploration":[169],"generation":[174],"comparative":[176],"charts.":[177],"strives":[179],"predict":[181],"broadest":[185],"species,":[188],"extensively":[193],"collate":[194],"annotations,":[197],"compute":[200],"such":[203],"rate":[206],"phyletic":[208],"profile.":[209],"can":[212],"be":[213],"assessed":[214],"via":[215],"SPARQL":[216],"RDF,":[217],"REST":[218],"API,":[219],"downloaded":[220],"or":[221],"browsed":[222],"online":[223],"https://orthodb.org.":[225]},"counts_by_year":[{"year":2026,"cited_by_count":3},{"year":2025,"cited_by_count":35},{"year":2024,"cited_by_count":56},{"year":2023,"cited_by_count":53},{"year":2022,"cited_by_count":36},{"year":2021,"cited_by_count":14}],"updated_date":"2026-03-27T05:58:40.876381","created_date":"2025-10-10T00:00:00"}
