{"id":"https://openalex.org/W2160993714","doi":"https://doi.org/10.1093/nar/30.1.158","title":"JSNP: a database of common gene variations in the Japanese population","display_name":"JSNP: a database of common gene variations in the Japanese population","publication_year":2002,"publication_date":"2002-01-01","ids":{"openalex":"https://openalex.org/W2160993714","doi":"https://doi.org/10.1093/nar/30.1.158","mag":"2160993714","pmid":"https://pubmed.ncbi.nlm.nih.gov/11752280"},"language":"en","primary_location":{"id":"doi:10.1093/nar/30.1.158","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/30.1.158","pdf_url":"https://academic.oup.com/nar/article-pdf/30/1/158/9901020/300158.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/nar/article-pdf/30/1/158/9901020/300158.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5109225493","display_name":"Mika Hirakawa","orcid":null},"institutions":[{"id":"https://openalex.org/I4210086780","display_name":"Japan Science and Technology Agency","ror":"https://ror.org/00097mb19","country_code":"JP","type":"government","lineage":["https://openalex.org/I4210086780"]}],"countries":["JP"],"is_corresponding":true,"raw_author_name":"M. Hirakawa","raw_affiliation_strings":["Bioinformatics Division, Japan Science and Technology Corporation (JST), 5-3 Yonban-cho, Chiyoda-ku, Tokyo 102-0081, Japan","Bioinformatics Division, Japan Science and Technology Corporation (JST), 5-3 Yonban-cho, Chiyoda-ku, Tokyo 102-0081, Japan and"],"affiliations":[{"raw_affiliation_string":"Bioinformatics Division, Japan Science and Technology Corporation (JST), 5-3 Yonban-cho, Chiyoda-ku, Tokyo 102-0081, Japan","institution_ids":[]},{"raw_affiliation_string":"Bioinformatics Division, Japan Science and Technology Corporation (JST), 5-3 Yonban-cho, Chiyoda-ku, Tokyo 102-0081, Japan and","institution_ids":["https://openalex.org/I4210086780"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5109225493"],"corresponding_institution_ids":["https://openalex.org/I4210086780"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":null,"fwci":9.2314,"has_fulltext":true,"cited_by_count":274,"citation_normalized_percentile":{"value":0.98801217,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":100},"biblio":{"volume":"30","issue":"1","first_page":"158","last_page":"162"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.995199978351593,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.995199978351593,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10261","display_name":"Genetic Associations and Epidemiology","score":0.9943000078201294,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9940000176429749,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.7303813695907593},{"id":"https://openalex.org/keywords/single-nucleotide-polymorphism","display_name":"Single-nucleotide polymorphism","score":0.7219963669776917},{"id":"https://openalex.org/keywords/snp","display_name":"SNP","score":0.658559262752533},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.5220691561698914},{"id":"https://openalex.org/keywords/population","display_name":"Population","score":0.5090619921684265},{"id":"https://openalex.org/keywords/human-genome","display_name":"Human genome","score":0.5035156607627869},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.4169791042804718},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.36026132106781006},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.349767804145813},{"id":"https://openalex.org/keywords/genotype","display_name":"Genotype","score":0.10590425133705139}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7303813695907593},{"id":"https://openalex.org/C153209595","wikidata":"https://www.wikidata.org/wiki/Q501128","display_name":"Single-nucleotide polymorphism","level":4,"score":0.7219963669776917},{"id":"https://openalex.org/C139275648","wikidata":"https://www.wikidata.org/wiki/Q17134011","display_name":"SNP","level":5,"score":0.658559262752533},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.5220691561698914},{"id":"https://openalex.org/C2908647359","wikidata":"https://www.wikidata.org/wiki/Q2625603","display_name":"Population","level":2,"score":0.5090619921684265},{"id":"https://openalex.org/C197077220","wikidata":"https://www.wikidata.org/wiki/Q720988","display_name":"Human genome","level":4,"score":0.5035156607627869},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.4169791042804718},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.36026132106781006},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.349767804145813},{"id":"https://openalex.org/C135763542","wikidata":"https://www.wikidata.org/wiki/Q106016","display_name":"Genotype","level":3,"score":0.10590425133705139},{"id":"https://openalex.org/C149923435","wikidata":"https://www.wikidata.org/wiki/Q37732","display_name":"Demography","level":1,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C144024400","wikidata":"https://www.wikidata.org/wiki/Q21201","display_name":"Sociology","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D002877","descriptor_name":"Chromosomes, Human","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002877","descriptor_name":"Chromosomes, Human","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002877","descriptor_name":"Chromosomes, Human","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005544","descriptor_name":"Forecasting","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005544","descriptor_name":"Forecasting","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005544","descriptor_name":"Forecasting","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007564","descriptor_name":"Japan","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007564","descriptor_name":"Japan","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007564","descriptor_name":"Japan","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014644","descriptor_name":"Genetic Variation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014644","descriptor_name":"Genetic Variation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014644","descriptor_name":"Genetic Variation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030342","descriptor_name":"Genetic Diseases, Inborn","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D030342","descriptor_name":"Genetic Diseases, Inborn","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D030342","descriptor_name":"Genetic Diseases, Inborn","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064420","descriptor_name":"Drug-Related Side Effects and Adverse Reactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064420","descriptor_name":"Drug-Related Side Effects and Adverse Reactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064420","descriptor_name":"Drug-Related Side Effects and Adverse Reactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1093/nar/30.1.158","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/30.1.158","pdf_url":"https://academic.oup.com/nar/article-pdf/30/1/158/9901020/300158.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:11752280","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/11752280","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null}],"best_oa_location":{"id":"doi:10.1093/nar/30.1.158","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/30.1.158","pdf_url":"https://academic.oup.com/nar/article-pdf/30/1/158/9901020/300158.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Partnerships for the goals","score":0.6800000071525574,"id":"https://metadata.un.org/sdg/17"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320320912","display_name":"Ministry of Education, Culture, Sports, Science and Technology","ror":"https://ror.org/048rj2z13"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2160993714.pdf","grobid_xml":"https://content.openalex.org/works/W2160993714.grobid-xml"},"referenced_works_count":23,"referenced_works":["https://openalex.org/W1493951357","https://openalex.org/W1499500424","https://openalex.org/W1565521845","https://openalex.org/W1926851645","https://openalex.org/W1971307410","https://openalex.org/W1976507424","https://openalex.org/W1977159876","https://openalex.org/W1993158258","https://openalex.org/W2065087403","https://openalex.org/W2096525273","https://openalex.org/W2104338867","https://openalex.org/W2106954216","https://openalex.org/W2110041134","https://openalex.org/W2122732537","https://openalex.org/W2127230663","https://openalex.org/W2143266521","https://openalex.org/W2164075646","https://openalex.org/W2165270659","https://openalex.org/W2165460636","https://openalex.org/W4232298325","https://openalex.org/W4241827326","https://openalex.org/W4245803912","https://openalex.org/W4247964656"],"related_works":["https://openalex.org/W2164855536","https://openalex.org/W1997352593","https://openalex.org/W2143489661","https://openalex.org/W2070581548","https://openalex.org/W4281711902","https://openalex.org/W3206555169","https://openalex.org/W3016573916","https://openalex.org/W3157359833","https://openalex.org/W3024317680","https://openalex.org/W1511048503"],"abstract_inverted_index":{"JSNP":[0,92,182],"is":[1,27,130,187],"a":[2,64,96,110,134],"repository":[3],"of":[4,24,54,75,82,127,133,160],"Japanese":[5,39,101],"Single":[6],"Nucleotide":[7],"Polymorphism":[8],"(SNP)":[9],"data,":[10],"begun":[11],"in":[12,42,45,72,164],"2000":[13],"and":[14,30,84,88,108,143,183],"developed":[15],"through":[16],"the":[17,38,51,55,67,73,80,85,100,105,128,131,147,158],"Prime":[18],"Minister's":[19],"Millennium":[20],"Project.":[21],"The":[22,57],"aim":[23],"this":[25],"undertaking":[26],"to":[28,33,115,119,138,149,181],"identify":[29,139],"collate":[31],"up":[32],"150":[34],"000":[35],"SNPs":[36,102,161],"from":[37,104],"population,":[40],"located":[41],"genes":[43],"or":[44,146],"adjacent":[46],"regions":[47,166],"that":[48,162],"might":[49],"influence":[50],"coding":[52],"sequence":[53],"genes.":[56],"project":[58,107,129],"has":[59,154],"been":[60,155],"carried":[61],"out":[62],"by":[63],"collaboration":[65],"between":[66,141],"Human":[68],"Genome":[69],"Center":[70],"(HGC)":[71],"Institute":[74],"Medical":[76],"Science":[77,87],"(IMS)":[78],"at":[79,189],"University":[81],"Tokyo":[83],"Japan":[86],"Technology":[89],"Corporation":[90],"(JST).":[91],"serves":[93],"as":[94,109],"both":[95],"storage":[97],"site":[98],"for":[99,112],"obtained":[103],"ongoing":[106],"facility":[111],"public":[113],"dissemination":[114],"allow":[116],"researchers":[117],"access":[118,180],"high":[120],"quality":[121],"SNP":[122],"data.":[123],"A":[124],"primary":[125],"motivation":[126],"construction":[132],"basic":[135],"data":[136],"set":[137],"relationships":[140],"polymorphisms":[142],"common":[144],"diseases":[145],"reaction":[148],"drugs.":[150],"As":[151],"such,":[152],"emphasis":[153],"placed":[156],"on":[157],"identification":[159],"lie":[163],"candidate":[165],"which":[167,172],"may":[168],"affect":[169],"phenotype":[170],"but":[171],"would":[173],"not":[174],"necessarily":[175],"directly":[176],"cause":[177],"disease.":[178],"Unrestricted":[179],"any":[184],"associated":[185],"files":[186],"available":[188],"http://snp.ims.u-tokyo.ac.jp/.":[190]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":2},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":4},{"year":2016,"cited_by_count":4},{"year":2015,"cited_by_count":11},{"year":2014,"cited_by_count":10},{"year":2013,"cited_by_count":8},{"year":2012,"cited_by_count":17}],"updated_date":"2026-01-13T01:12:25.745995","created_date":"2025-10-10T00:00:00"}