{"id":"https://openalex.org/W2773666933","doi":"https://doi.org/10.1093/jamia/ocx137","title":"PIE: A prior knowledge guided integrated likelihood estimation method for bias reduction in association studies using electronic health records data","display_name":"PIE: A prior knowledge guided integrated likelihood estimation method for bias reduction in association studies using electronic health records data","publication_year":2017,"publication_date":"2017-11-15","ids":{"openalex":"https://openalex.org/W2773666933","doi":"https://doi.org/10.1093/jamia/ocx137","mag":"2773666933","pmid":"https://pubmed.ncbi.nlm.nih.gov/29206922"},"language":"en","primary_location":{"id":"doi:10.1093/jamia/ocx137","is_oa":true,"landing_page_url":"https://doi.org/10.1093/jamia/ocx137","pdf_url":"https://academic.oup.com/jamia/article-pdf/25/3/345/24152105/ocx137.pdf","source":{"id":"https://openalex.org/S129839026","display_name":"Journal of the American Medical Informatics Association","issn_l":"1067-5027","issn":["1067-5027","1527-974X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/jamia/article-pdf/25/3/345/24152105/ocx137.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5008531429","display_name":"Jing Huang","orcid":"https://orcid.org/0000-0002-6133-6988"},"institutions":[{"id":"https://openalex.org/I79576946","display_name":"University of Pennsylvania","ror":"https://ror.org/00b30xv10","country_code":"US","type":"education","lineage":["https://openalex.org/I79576946"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Jing Huang","raw_affiliation_strings":["Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA","Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA and"],"affiliations":[{"raw_affiliation_string":"Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA","institution_ids":["https://openalex.org/I79576946"]},{"raw_affiliation_string":"Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA and","institution_ids":["https://openalex.org/I79576946"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089178051","display_name":"Rui Duan","orcid":"https://orcid.org/0000-0002-9261-4864"},"institutions":[{"id":"https://openalex.org/I79576946","display_name":"University of Pennsylvania","ror":"https://ror.org/00b30xv10","country_code":"US","type":"education","lineage":["https://openalex.org/I79576946"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Rui Duan","raw_affiliation_strings":["Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA","Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA and"],"affiliations":[{"raw_affiliation_string":"Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA","institution_ids":["https://openalex.org/I79576946"]},{"raw_affiliation_string":"Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA and","institution_ids":["https://openalex.org/I79576946"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008134033","display_name":"Rebecca A. Hubbard","orcid":"https://orcid.org/0000-0003-0879-0994"},"institutions":[{"id":"https://openalex.org/I79576946","display_name":"University of Pennsylvania","ror":"https://ror.org/00b30xv10","country_code":"US","type":"education","lineage":["https://openalex.org/I79576946"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Rebecca A Hubbard","raw_affiliation_strings":["Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA","Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA and"],"affiliations":[{"raw_affiliation_string":"Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA","institution_ids":["https://openalex.org/I79576946"]},{"raw_affiliation_string":"Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA and","institution_ids":["https://openalex.org/I79576946"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5010253402","display_name":"Yonghui Wu","orcid":"https://orcid.org/0000-0002-6780-6135"},"institutions":[{"id":"https://openalex.org/I919571938","display_name":"The University of Texas Health Science Center at Houston","ror":"https://ror.org/03gds6c39","country_code":"US","type":"education","lineage":["https://openalex.org/I919571938"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yonghui Wu","raw_affiliation_strings":["School of Biomedical Informatics, University of Texas Health Science Center at Houston, Houston, TX, USA","School of Biomedical Informatics, Univer-sity of Texas Health Science Center at Houston, Houston, TX, USA"],"affiliations":[{"raw_affiliation_string":"School of Biomedical Informatics, University of Texas Health Science Center at Houston, Houston, TX, USA","institution_ids":["https://openalex.org/I919571938"]},{"raw_affiliation_string":"School of Biomedical Informatics, Univer-sity of Texas Health Science Center at Houston, Houston, TX, USA","institution_ids":["https://openalex.org/I919571938"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032971510","display_name":"Jason H. Moore","orcid":"https://orcid.org/0000-0002-5015-1099"},"institutions":[{"id":"https://openalex.org/I79576946","display_name":"University of Pennsylvania","ror":"https://ror.org/00b30xv10","country_code":"US","type":"education","lineage":["https://openalex.org/I79576946"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jason H Moore","raw_affiliation_strings":["Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA","Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA and"],"affiliations":[{"raw_affiliation_string":"Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA","institution_ids":["https://openalex.org/I79576946"]},{"raw_affiliation_string":"Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA and","institution_ids":["https://openalex.org/I79576946"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084072550","display_name":"Hua Xu","orcid":"https://orcid.org/0000-0002-5274-4672"},"institutions":[{"id":"https://openalex.org/I919571938","display_name":"The University of Texas Health Science Center at Houston","ror":"https://ror.org/03gds6c39","country_code":"US","type":"education","lineage":["https://openalex.org/I919571938"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Hua Xu","raw_affiliation_strings":["School of Biomedical Informatics, University of Texas Health Science Center at Houston, Houston, TX, USA","School of Biomedical Informatics, Univer-sity of Texas Health Science Center at Houston, Houston, TX, USA"],"affiliations":[{"raw_affiliation_string":"School of Biomedical Informatics, University of Texas Health Science Center at Houston, Houston, TX, USA","institution_ids":["https://openalex.org/I919571938"]},{"raw_affiliation_string":"School of Biomedical Informatics, Univer-sity of Texas Health Science Center at Houston, Houston, TX, USA","institution_ids":["https://openalex.org/I919571938"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100454438","display_name":"Yong Chen","orcid":"https://orcid.org/0000-0003-0835-0788"},"institutions":[{"id":"https://openalex.org/I79576946","display_name":"University of Pennsylvania","ror":"https://ror.org/00b30xv10","country_code":"US","type":"education","lineage":["https://openalex.org/I79576946"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yong Chen","raw_affiliation_strings":["Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA","Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA and"],"affiliations":[{"raw_affiliation_string":"Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA","institution_ids":["https://openalex.org/I79576946"]},{"raw_affiliation_string":"Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA and","institution_ids":["https://openalex.org/I79576946"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5008531429"],"corresponding_institution_ids":["https://openalex.org/I79576946"],"apc_list":{"value":3967,"currency":"USD","value_usd":3967},"apc_paid":null,"fwci":2.1017,"has_fulltext":true,"cited_by_count":27,"citation_normalized_percentile":{"value":0.88085903,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"25","issue":"3","first_page":"345","last_page":"352"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10261","display_name":"Genetic Associations and Epidemiology","score":0.996999979019165,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10261","display_name":"Genetic Associations and Epidemiology","score":0.996999979019165,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10136","display_name":"Statistical Methods and Inference","score":0.9778000116348267,"subfield":{"id":"https://openalex.org/subfields/2613","display_name":"Statistics and Probability"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10845","display_name":"Advanced Causal Inference Techniques","score":0.9728000164031982,"subfield":{"id":"https://openalex.org/subfields/2613","display_name":"Statistics and Probability"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/gold-standard","display_name":"Gold standard (test)","score":0.6674140095710754},{"id":"https://openalex.org/keywords/sensitivity","display_name":"Sensitivity (control systems)","score":0.5886383652687073},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5723920464515686},{"id":"https://openalex.org/keywords/estimation","display_name":"Estimation","score":0.5296758413314819},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.494928777217865},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.4703890085220337},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.21852797269821167}],"concepts":[{"id":"https://openalex.org/C40993552","wikidata":"https://www.wikidata.org/wiki/Q514654","display_name":"Gold standard (test)","level":2,"score":0.6674140095710754},{"id":"https://openalex.org/C21200559","wikidata":"https://www.wikidata.org/wiki/Q7451068","display_name":"Sensitivity (control systems)","level":2,"score":0.5886383652687073},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5723920464515686},{"id":"https://openalex.org/C96250715","wikidata":"https://www.wikidata.org/wiki/Q965330","display_name":"Estimation","level":2,"score":0.5296758413314819},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.494928777217865},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4703890085220337},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.21852797269821167},{"id":"https://openalex.org/C24326235","wikidata":"https://www.wikidata.org/wiki/Q126095","display_name":"Electronic engineering","level":1,"score":0.0},{"id":"https://openalex.org/C187736073","wikidata":"https://www.wikidata.org/wiki/Q2920921","display_name":"Management","level":1,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1093/jamia/ocx137","is_oa":true,"landing_page_url":"https://doi.org/10.1093/jamia/ocx137","pdf_url":"https://academic.oup.com/jamia/article-pdf/25/3/345/24152105/ocx137.pdf","source":{"id":"https://openalex.org/S129839026","display_name":"Journal of the American Medical Informatics Association","issn_l":"1067-5027","issn":["1067-5027","1527-974X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association","raw_type":"journal-article"},{"id":"pmid:29206922","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/29206922","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association : JAMIA","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:7378882","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/7378882","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Am Med Inform Assoc","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/jamia/ocx137","is_oa":true,"landing_page_url":"https://doi.org/10.1093/jamia/ocx137","pdf_url":"https://academic.oup.com/jamia/article-pdf/25/3/345/24152105/ocx137.pdf","source":{"id":"https://openalex.org/S129839026","display_name":"Journal of the American Medical Informatics Association","issn_l":"1067-5027","issn":["1067-5027","1527-974X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1194850572","display_name":null,"funder_award_id":"TR001878","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G1318844706","display_name":null,"funder_award_id":"ES013508","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G2418245306","display_name":null,"funder_award_id":"U01AG006781","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G3237115699","display_name":null,"funder_award_id":"R01AI130460","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G437107643","display_name":null,"funder_award_id":"U24CA194215","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G5087828963","display_name":null,"funder_award_id":"DK112217","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G7689773838","display_name":null,"funder_award_id":"R01GM103859","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"}],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2773666933.pdf","grobid_xml":"https://content.openalex.org/works/W2773666933.grobid-xml"},"referenced_works_count":43,"referenced_works":["https://openalex.org/W61480698","https://openalex.org/W169580636","https://openalex.org/W1512882103","https://openalex.org/W1515452625","https://openalex.org/W1573988226","https://openalex.org/W1585365342","https://openalex.org/W1779612606","https://openalex.org/W1964662096","https://openalex.org/W1968551454","https://openalex.org/W1988761237","https://openalex.org/W1993231267","https://openalex.org/W2004961725","https://openalex.org/W2011980051","https://openalex.org/W2014651914","https://openalex.org/W2016104730","https://openalex.org/W2017966952","https://openalex.org/W2022393739","https://openalex.org/W2022595986","https://openalex.org/W2024710265","https://openalex.org/W2051743300","https://openalex.org/W2053237747","https://openalex.org/W2090963365","https://openalex.org/W2105714645","https://openalex.org/W2107021160","https://openalex.org/W2110777834","https://openalex.org/W2113105800","https://openalex.org/W2113952938","https://openalex.org/W2114213310","https://openalex.org/W2114960588","https://openalex.org/W2122019985","https://openalex.org/W2130681257","https://openalex.org/W2135206202","https://openalex.org/W2142071150","https://openalex.org/W2148563768","https://openalex.org/W2149569695","https://openalex.org/W2154048976","https://openalex.org/W2163339457","https://openalex.org/W2512716582","https://openalex.org/W2620617644","https://openalex.org/W4231958944","https://openalex.org/W4302338619","https://openalex.org/W6634436982","https://openalex.org/W6738580400"],"related_works":["https://openalex.org/W832193342","https://openalex.org/W1987850981","https://openalex.org/W2378757965","https://openalex.org/W2962529488","https://openalex.org/W2576994247","https://openalex.org/W4224903346","https://openalex.org/W2608353378","https://openalex.org/W4249206767","https://openalex.org/W1593262897","https://openalex.org/W2372869593"],"abstract_inverted_index":{"This":[0],"study":[1],"demonstrates":[2],"that":[3],"the":[4],"proposed":[5],"method":[6],"can":[7],"effectively":[8],"reduce":[9],"estimation":[10],"bias":[11],"caused":[12],"by":[13,19],"imperfect":[14],"phenotyping":[15],"in":[16],"EHR-derived":[17],"data":[18],"incorporating":[20],"prior":[21],"information":[22],"through":[23],"integrated":[24],"likelihood.":[25]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":8},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":4},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":4},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":5}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
