{"id":"https://openalex.org/W2757504960","doi":"https://doi.org/10.1093/jamia/ocx084","title":"The MIMIC Code Repository: enabling reproducibility in critical care research","display_name":"The MIMIC Code Repository: enabling reproducibility in critical care research","publication_year":2017,"publication_date":"2017-07-27","ids":{"openalex":"https://openalex.org/W2757504960","doi":"https://doi.org/10.1093/jamia/ocx084","mag":"2757504960","pmid":"https://pubmed.ncbi.nlm.nih.gov/29036464"},"language":"en","primary_location":{"id":"doi:10.1093/jamia/ocx084","is_oa":true,"landing_page_url":"https://doi.org/10.1093/jamia/ocx084","pdf_url":"https://academic.oup.com/jamia/article-pdf/25/1/32/34149701/ocx084.pdf","source":{"id":"https://openalex.org/S129839026","display_name":"Journal of the American Medical Informatics Association","issn_l":"1067-5027","issn":["1067-5027","1527-974X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/jamia/article-pdf/25/1/32/34149701/ocx084.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5003528274","display_name":"Alistair E. W. Johnson","orcid":"https://orcid.org/0000-0002-8735-3014"},"institutions":[{"id":"https://openalex.org/I63966007","display_name":"Massachusetts Institute of Technology","ror":"https://ror.org/042nb2s44","country_code":"US","type":"education","lineage":["https://openalex.org/I63966007"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Alistair E W Johnson","raw_affiliation_strings":["Massachusetts Institute of Technology, Cambridge, MA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Massachusetts Institute of Technology, Cambridge, MA, USA","institution_ids":["https://openalex.org/I63966007"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048912999","display_name":"David J. Stone","orcid":"https://orcid.org/0000-0003-4855-4283"},"institutions":[{"id":"https://openalex.org/I51556381","display_name":"University of Virginia","ror":"https://ror.org/0153tk833","country_code":"US","type":"education","lineage":["https://openalex.org/I51556381"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"David J Stone","raw_affiliation_strings":["University of Virginia School of Medicine, Charlottesville, VA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Virginia School of Medicine, Charlottesville, VA, USA","institution_ids":["https://openalex.org/I51556381"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031401755","display_name":"Leo Anthony Celi","orcid":"https://orcid.org/0000-0001-6712-6626"},"institutions":[{"id":"https://openalex.org/I1316535847","display_name":"Beth Israel Deaconess Medical Center","ror":"https://ror.org/04drvxt59","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1316535847"]},{"id":"https://openalex.org/I63966007","display_name":"Massachusetts Institute of Technology","ror":"https://ror.org/042nb2s44","country_code":"US","type":"education","lineage":["https://openalex.org/I63966007"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Leo A Celi","raw_affiliation_strings":["Beth Israel Deaconess Medical Center, Boston, MA, USA","Massachusetts Institute of Technology, Cambridge, MA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Beth Israel Deaconess Medical Center, Boston, MA, USA","institution_ids":["https://openalex.org/I1316535847"]},{"raw_affiliation_string":"Massachusetts Institute of Technology, Cambridge, MA, USA","institution_ids":["https://openalex.org/I63966007"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5086791063","display_name":"Tom Pollard","orcid":"https://orcid.org/0000-0002-5676-7898"},"institutions":[{"id":"https://openalex.org/I63966007","display_name":"Massachusetts Institute of Technology","ror":"https://ror.org/042nb2s44","country_code":"US","type":"education","lineage":["https://openalex.org/I63966007"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Tom J Pollard","raw_affiliation_strings":["Massachusetts Institute of Technology, Cambridge, MA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Massachusetts Institute of Technology, Cambridge, MA, USA","institution_ids":["https://openalex.org/I63966007"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5003528274"],"corresponding_institution_ids":["https://openalex.org/I63966007"],"apc_list":{"value":3967,"currency":"USD","value_usd":3967},"apc_paid":{"value":3967,"currency":"USD","value_usd":3967},"fwci":15.0502,"has_fulltext":true,"cited_by_count":462,"citation_normalized_percentile":{"value":0.99456596,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":96,"max":100},"biblio":{"volume":"25","issue":"1","first_page":"32","last_page":"39"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10218","display_name":"Sepsis Diagnosis and Treatment","score":0.47999998927116394,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10218","display_name":"Sepsis Diagnosis and Treatment","score":0.47999998927116394,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.23489999771118164,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10206","display_name":"Meta-analysis and systematic reviews","score":0.04619999974966049,"subfield":{"id":"https://openalex.org/subfields/1804","display_name":"Statistics, Probability and Uncertainty"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7650645971298218},{"id":"https://openalex.org/keywords/executable","display_name":"Executable","score":0.7486844062805176},{"id":"https://openalex.org/keywords/code","display_name":"Code (set theory)","score":0.5315311551094055},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.5226285457611084},{"id":"https://openalex.org/keywords/source-code","display_name":"Source code","score":0.45809775590896606},{"id":"https://openalex.org/keywords/relational-database","display_name":"Relational database","score":0.44613179564476013},{"id":"https://openalex.org/keywords/resource","display_name":"Resource (disambiguation)","score":0.4118286669254303},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.35270610451698303},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.11315903067588806}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7650645971298218},{"id":"https://openalex.org/C160145156","wikidata":"https://www.wikidata.org/wiki/Q778586","display_name":"Executable","level":2,"score":0.7486844062805176},{"id":"https://openalex.org/C2776760102","wikidata":"https://www.wikidata.org/wiki/Q5139990","display_name":"Code (set theory)","level":3,"score":0.5315311551094055},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.5226285457611084},{"id":"https://openalex.org/C43126263","wikidata":"https://www.wikidata.org/wiki/Q128751","display_name":"Source code","level":2,"score":0.45809775590896606},{"id":"https://openalex.org/C5655090","wikidata":"https://www.wikidata.org/wiki/Q192588","display_name":"Relational database","level":2,"score":0.44613179564476013},{"id":"https://openalex.org/C206345919","wikidata":"https://www.wikidata.org/wiki/Q20380951","display_name":"Resource (disambiguation)","level":2,"score":0.4118286669254303},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.35270610451698303},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.11315903067588806},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.0},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D003422","descriptor_name":"Critical Care","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003422","descriptor_name":"Critical Care","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003422","descriptor_name":"Critical Care","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012372","descriptor_name":"ROC Curve","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012372","descriptor_name":"ROC Curve","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012372","descriptor_name":"ROC Curve","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012720","descriptor_name":"Severity of Illness Index","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012720","descriptor_name":"Severity of Illness Index","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012720","descriptor_name":"Severity of Illness Index","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013812","descriptor_name":"Therapeutics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013812","descriptor_name":"Therapeutics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013812","descriptor_name":"Therapeutics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015897","descriptor_name":"Comorbidity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015897","descriptor_name":"Comorbidity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015897","descriptor_name":"Comorbidity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018805","descriptor_name":"Sepsis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018805","descriptor_name":"Sepsis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018805","descriptor_name":"Sepsis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D022126","descriptor_name":"Access to Information","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D022126","descriptor_name":"Access to Information","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D022126","descriptor_name":"Access to Information","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D035843","descriptor_name":"Biomedical Research","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D035843","descriptor_name":"Biomedical Research","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D035843","descriptor_name":"Biomedical Research","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D063305","descriptor_name":"Organ Dysfunction Scores","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D063305","descriptor_name":"Organ Dysfunction Scores","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D063305","descriptor_name":"Organ Dysfunction Scores","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/jamia/ocx084","is_oa":true,"landing_page_url":"https://doi.org/10.1093/jamia/ocx084","pdf_url":"https://academic.oup.com/jamia/article-pdf/25/1/32/34149701/ocx084.pdf","source":{"id":"https://openalex.org/S129839026","display_name":"Journal of the American Medical Informatics Association","issn_l":"1067-5027","issn":["1067-5027","1527-974X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association","raw_type":"journal-article"},{"id":"pmid:29036464","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/29036464","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association : JAMIA","raw_type":null},{"id":"pmh:oai:europepmc.org:5382420","is_oa":false,"landing_page_url":"http://europepmc.org/pmc/articles/PMC6381763","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:6381763","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6381763","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Am Med Inform Assoc","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/jamia/ocx084","is_oa":true,"landing_page_url":"https://doi.org/10.1093/jamia/ocx084","pdf_url":"https://academic.oup.com/jamia/article-pdf/25/1/32/34149701/ocx084.pdf","source":{"id":"https://openalex.org/S129839026","display_name":"Journal of the American Medical Informatics Association","issn_l":"1067-5027","issn":["1067-5027","1527-974X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2013230526","display_name":"Integrating Data, Models, and Reasoning in Critical Care","funder_award_id":"5r01eb001659-10","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G2180212656","display_name":null,"funder_award_id":"R01-GM104987","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G2562358904","display_name":"Critical Care Informatics","funder_award_id":"2r56eb017205-08a1","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G5520316217","display_name":null,"funder_award_id":"NIH-R01","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G7075035638","display_name":null,"funder_award_id":"R01-EB017205","funder_id":"https://openalex.org/F4320337363","funder_display_name":"National Institute of Biomedical Imaging and Bioengineering"},{"id":"https://openalex.org/G99462866","display_name":null,"funder_award_id":"R01EB001659","funder_id":"https://openalex.org/F4320337363","funder_display_name":"National Institute of Biomedical Imaging and Bioengineering"}],"funders":[{"id":"https://openalex.org/F4320309369","display_name":"Massachusetts Institute of Technology","ror":"https://ror.org/042nb2s44"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337354","display_name":"National Institute of General Medical Sciences","ror":"https://ror.org/04q48ey07"},{"id":"https://openalex.org/F4320337363","display_name":"National Institute of Biomedical Imaging and Bioengineering","ror":"https://ror.org/00372qc85"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2757504960.pdf","grobid_xml":"https://content.openalex.org/works/W2757504960.grobid-xml"},"referenced_works_count":43,"referenced_works":["https://openalex.org/W73284561","https://openalex.org/W1898928487","https://openalex.org/W1967300023","https://openalex.org/W1968644320","https://openalex.org/W2011861268","https://openalex.org/W2033925475","https://openalex.org/W2035038290","https://openalex.org/W2043436644","https://openalex.org/W2045030413","https://openalex.org/W2049927822","https://openalex.org/W2057780602","https://openalex.org/W2061326496","https://openalex.org/W2061939373","https://openalex.org/W2120156715","https://openalex.org/W2126431109","https://openalex.org/W2127752837","https://openalex.org/W2128349740","https://openalex.org/W2131966673","https://openalex.org/W2140396673","https://openalex.org/W2145577370","https://openalex.org/W2181664764","https://openalex.org/W2280404143","https://openalex.org/W2282181907","https://openalex.org/W2331591468","https://openalex.org/W2339297454","https://openalex.org/W2396881363","https://openalex.org/W2406493898","https://openalex.org/W2472803348","https://openalex.org/W2529803226","https://openalex.org/W2598023782","https://openalex.org/W2613483874","https://openalex.org/W2785720656","https://openalex.org/W2949379258","https://openalex.org/W3010153256","https://openalex.org/W3210979361","https://openalex.org/W4206713405","https://openalex.org/W4237871677","https://openalex.org/W4247943214","https://openalex.org/W6602985643","https://openalex.org/W6703747730","https://openalex.org/W6712503630","https://openalex.org/W6748106616","https://openalex.org/W6982728064"],"related_works":["https://openalex.org/W2350278424","https://openalex.org/W2071432835","https://openalex.org/W4239401009","https://openalex.org/W4234371507","https://openalex.org/W2598672065","https://openalex.org/W1993817217","https://openalex.org/W3120610872","https://openalex.org/W1638297612","https://openalex.org/W2523911541","https://openalex.org/W3081644756"],"abstract_inverted_index":{"Objective:":[0],"Lack":[1],"of":[2,13,68,84,91,151,164,192,233],"reproducibility":[3],"in":[4,203],"medical":[5],"studies":[6,44,113,207],"is":[7,56,199],"a":[8,14,37,63,116,147,170,187,200],"barrier":[9],"to":[10,18,58,121,137,154,175],"the":[11,27,60,69,131,140,152,158,165,173,193,209,223],"generation":[12],"robust":[15],"knowledge":[16],"base":[17,40],"support":[19],"clinical":[20],"decision-making.":[21],"In":[22],"this":[23],"paper":[24],"we":[25,228],"outline":[26],"Medical":[28],"Information":[29],"Mart":[30],"for":[31,41,95,108,118,149,172,180,196],"Intensive":[32],"Care":[33],"(MIMIC)":[34],"Code":[35,55],"Repository,":[36],"centralized":[38,144],"code":[39,195,221],"generating":[42],"reproducible":[43,231],"on":[45,177,208],"an":[46],"openly":[47],"available":[48],"critical":[49],"care":[50],"dataset.":[51],"Materials":[52],"and":[53,71,102,110,133,183,214],"Methods:":[54],"provided":[57],"load":[59],"data":[61,132,153,159],"into":[62],"relational":[64],"structure,":[65],"create":[66],"extractions":[67],"data,":[70],"reproduce":[72,111],"entire":[73],"analysis":[74,232],"plans":[75],"including":[76],"research":[77,181,206],"studies.":[78],"Results:":[79],"Concepts":[80],"extracted":[81],"include":[82],"severity":[83],"illness":[85],"scores,":[86,99],"comorbid":[87],"status,":[88],"administrative":[89],"definitions":[90],"sepsis,":[92,96],"physiologic":[93],"criteria":[94],"organ":[97],"failure":[98],"treatment":[100],"administration,":[101],"more.":[103],"Executable":[104],"documents":[105],"are":[106,212],"used":[107],"tutorials":[109],"published":[112],"end-to-end,":[114],"providing":[115,218],"template":[117],"future":[119],"researchers":[120],"replicate.":[122],"The":[123,143],"repository's":[124],"issue":[125],"tracker":[126],"enables":[127],"community":[128,174],"discussion":[129],"about":[130],"concepts,":[134],"allowing":[135],"users":[136,150],"collaboratively":[138],"improve":[139],"resource.":[141],"Discussion:":[142],"repository":[145],"provides":[146,169],"platform":[148],"interact":[155],"directly":[156],"with":[157,186],"generators,":[160],"facilitating":[161],"greater":[162],"understanding":[163],"data.":[166],"It":[167],"also":[168],"location":[171],"collaborate":[176],"necessary":[178],"concepts":[179,198],"progress":[182],"share":[184],"them":[185],"larger":[188],"audience.":[189],"Consistent":[190],"application":[191],"same":[194],"underlying":[197],"key":[201],"step":[202],"ensuring":[204],"that":[205],"MIMIC":[210],"database":[211],"comparable":[213],"reproducible.":[215],"Conclusion:":[216],"By":[217],"open":[219],"source":[220],"alongside":[222],"freely":[224],"accessible":[225],"MIMIC-III":[226],"database,":[227],"enable":[229],"end-to-end":[230],"electronic":[234],"health":[235],"records.":[236]},"counts_by_year":[{"year":2026,"cited_by_count":29},{"year":2025,"cited_by_count":67},{"year":2024,"cited_by_count":69},{"year":2023,"cited_by_count":75},{"year":2022,"cited_by_count":63},{"year":2021,"cited_by_count":66},{"year":2020,"cited_by_count":44},{"year":2019,"cited_by_count":27},{"year":2018,"cited_by_count":18},{"year":2017,"cited_by_count":3}],"updated_date":"2026-08-11T07:18:39.950985","created_date":"2025-10-10T00:00:00"}
