{"id":"https://openalex.org/W2640294447","doi":"https://doi.org/10.1093/jamia/ocx061","title":"Development and validation of an electronic medical record (EMR)-based computed phenotype of HIV-1 infection","display_name":"Development and validation of an electronic medical record (EMR)-based computed phenotype of HIV-1 infection","publication_year":2017,"publication_date":"2017-05-18","ids":{"openalex":"https://openalex.org/W2640294447","doi":"https://doi.org/10.1093/jamia/ocx061","mag":"2640294447","pmid":"https://pubmed.ncbi.nlm.nih.gov/28645207"},"language":"en","primary_location":{"id":"doi:10.1093/jamia/ocx061","is_oa":true,"landing_page_url":"https://doi.org/10.1093/jamia/ocx061","pdf_url":"https://academic.oup.com/jamia/article-pdf/25/2/150/34150036/ocx061.pdf","source":{"id":"https://openalex.org/S129839026","display_name":"Journal of the American Medical Informatics Association","issn_l":"1067-5027","issn":["1067-5027","1527-974X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/jamia/article-pdf/25/2/150/34150036/ocx061.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5043388876","display_name":"Devon Paul","orcid":null},"institutions":[{"id":"https://openalex.org/I170897317","display_name":"Duke University","ror":"https://ror.org/00py81415","country_code":"US","type":"education","lineage":["https://openalex.org/I170897317"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Devon W Paul","raw_affiliation_strings":["Division of Pulmonary, Allergy, and Critical Care Medicine, Duke University, Durham, NC, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Pulmonary, Allergy, and Critical Care Medicine, Duke University, Durham, NC, USA","institution_ids":["https://openalex.org/I170897317"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066161835","display_name":"Nigel B. Neely","orcid":null},"institutions":[{"id":"https://openalex.org/I4210088741","display_name":"Clinical Research Institute","ror":"https://ror.org/009ywjj88","country_code":"US","type":"facility","lineage":["https://openalex.org/I4210088741"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Nigel B Neely","raw_affiliation_strings":["Duke Clinical Research Institute, Durham, NC, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Duke Clinical Research Institute, Durham, NC, USA","institution_ids":["https://openalex.org/I4210088741"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011714009","display_name":"Meredith E. Clement","orcid":"https://orcid.org/0000-0002-0283-6368"},"institutions":[{"id":"https://openalex.org/I4210088741","display_name":"Clinical Research Institute","ror":"https://ror.org/009ywjj88","country_code":"US","type":"facility","lineage":["https://openalex.org/I4210088741"]},{"id":"https://openalex.org/I170897317","display_name":"Duke University","ror":"https://ror.org/00py81415","country_code":"US","type":"education","lineage":["https://openalex.org/I170897317"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Meredith Clement","raw_affiliation_strings":["Division of Infectious Diseases, Duke University, Durham, NC, USA","Duke Clinical Research Institute, Durham, NC, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Infectious Diseases, Duke University, Durham, NC, USA","institution_ids":["https://openalex.org/I170897317"]},{"raw_affiliation_string":"Duke Clinical Research Institute, Durham, NC, USA","institution_ids":["https://openalex.org/I4210088741"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025188779","display_name":"Isaretta Riley","orcid":"https://orcid.org/0000-0003-1184-7242"},"institutions":[{"id":"https://openalex.org/I170897317","display_name":"Duke University","ror":"https://ror.org/00py81415","country_code":"US","type":"education","lineage":["https://openalex.org/I170897317"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Isaretta Riley","raw_affiliation_strings":["Division of Pulmonary, Allergy, and Critical Care Medicine, Duke University, Durham, NC, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Pulmonary, Allergy, and Critical Care Medicine, Duke University, Durham, NC, USA","institution_ids":["https://openalex.org/I170897317"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020871988","display_name":"Mashael Al\u2010Hegelan","orcid":null},"institutions":[{"id":"https://openalex.org/I170897317","display_name":"Duke University","ror":"https://ror.org/00py81415","country_code":"US","type":"education","lineage":["https://openalex.org/I170897317"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Mashael Al-Hegelan","raw_affiliation_strings":["Division of Pulmonary, Allergy, and Critical Care Medicine, Duke University, Durham, NC, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Pulmonary, Allergy, and Critical Care Medicine, Duke University, Durham, NC, USA","institution_ids":["https://openalex.org/I170897317"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003197350","display_name":"Matthew Phelan","orcid":null},"institutions":[{"id":"https://openalex.org/I4210088741","display_name":"Clinical Research Institute","ror":"https://ror.org/009ywjj88","country_code":"US","type":"facility","lineage":["https://openalex.org/I4210088741"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Matthew Phelan","raw_affiliation_strings":["Duke Clinical Research Institute, Durham, NC, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Duke Clinical Research Institute, Durham, NC, USA","institution_ids":["https://openalex.org/I4210088741"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101732168","display_name":"Monica Kraft","orcid":"https://orcid.org/0000-0003-2626-2183"},"institutions":[{"id":"https://openalex.org/I138006243","display_name":"University of Arizona","ror":"https://ror.org/03m2x1q45","country_code":"US","type":"education","lineage":["https://openalex.org/I138006243"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Monica Kraft","raw_affiliation_strings":["Department of Internal Medicine, University of Arizona, Tucson, AZ, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Internal Medicine, University of Arizona, Tucson, AZ, USA","institution_ids":["https://openalex.org/I138006243"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006062737","display_name":"David M. Murdoch","orcid":"https://orcid.org/0000-0001-7201-7950"},"institutions":[{"id":"https://openalex.org/I170897317","display_name":"Duke University","ror":"https://ror.org/00py81415","country_code":"US","type":"education","lineage":["https://openalex.org/I170897317"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"David M Murdoch","raw_affiliation_strings":["Division of Pulmonary, Allergy, and Critical Care Medicine, Duke University, Durham, NC, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Pulmonary, Allergy, and Critical Care Medicine, Duke University, Durham, NC, USA","institution_ids":["https://openalex.org/I170897317"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110741474","display_name":"Joseph Lucas","orcid":null},"institutions":[{"id":"https://openalex.org/I4210088741","display_name":"Clinical Research Institute","ror":"https://ror.org/009ywjj88","country_code":"US","type":"facility","lineage":["https://openalex.org/I4210088741"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Joseph Lucas","raw_affiliation_strings":["Duke Clinical Research Institute, Durham, NC, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Duke Clinical Research Institute, Durham, NC, USA","institution_ids":["https://openalex.org/I4210088741"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110151993","display_name":"John Bartlett","orcid":null},"institutions":[{"id":"https://openalex.org/I170897317","display_name":"Duke University","ror":"https://ror.org/00py81415","country_code":"US","type":"education","lineage":["https://openalex.org/I170897317"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"John Bartlett","raw_affiliation_strings":["Division of Infectious Diseases, Duke University, Durham, NC, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Infectious Diseases, Duke University, Durham, NC, USA","institution_ids":["https://openalex.org/I170897317"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015389391","display_name":"Mehri S. McKellar","orcid":"https://orcid.org/0000-0003-2942-5398"},"institutions":[{"id":"https://openalex.org/I170897317","display_name":"Duke University","ror":"https://ror.org/00py81415","country_code":"US","type":"education","lineage":["https://openalex.org/I170897317"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Mehri McKellar","raw_affiliation_strings":["Division of Infectious Diseases, Duke University, Durham, NC, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Infectious Diseases, Duke University, Durham, NC, USA","institution_ids":["https://openalex.org/I170897317"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5013049965","display_name":"Loretta G. Que","orcid":"https://orcid.org/0000-0001-9188-9244"},"institutions":[{"id":"https://openalex.org/I170897317","display_name":"Duke University","ror":"https://ror.org/00py81415","country_code":"US","type":"education","lineage":["https://openalex.org/I170897317"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Loretta G Que","raw_affiliation_strings":["Division of Pulmonary, Allergy, and Critical Care Medicine, Duke University, Durham, NC, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Pulmonary, Allergy, and Critical Care Medicine, Duke University, Durham, NC, USA","institution_ids":["https://openalex.org/I170897317"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":12,"corresponding_author_ids":["https://openalex.org/A5043388876"],"corresponding_institution_ids":["https://openalex.org/I170897317"],"apc_list":{"value":3967,"currency":"USD","value_usd":3967},"apc_paid":null,"fwci":1.665,"has_fulltext":true,"cited_by_count":39,"citation_normalized_percentile":{"value":0.8800885,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"25","issue":"2","first_page":"150","last_page":"157"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T13702","display_name":"Machine Learning in Healthcare","score":0.2492000013589859,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T13702","display_name":"Machine Learning in Healthcare","score":0.2492000013589859,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10350","display_name":"Electronic Health Records Systems","score":0.12960000336170197,"subfield":{"id":"https://openalex.org/subfields/3605","display_name":"Health Information Management"},"field":{"id":"https://openalex.org/fields/36","display_name":"Health Professions"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10112","display_name":"HIV Research and Treatment","score":0.08489999920129776,"subfield":{"id":"https://openalex.org/subfields/2406","display_name":"Virology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.7795379161834717},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.7118510603904724},{"id":"https://openalex.org/keywords/cohort","display_name":"Cohort","score":0.6635079979896545},{"id":"https://openalex.org/keywords/medical-record","display_name":"Medical record","score":0.6290013790130615},{"id":"https://openalex.org/keywords/human-immunodeficiency-virus","display_name":"Human immunodeficiency virus (HIV)","score":0.6135090589523315},{"id":"https://openalex.org/keywords/gold-standard","display_name":"Gold standard (test)","score":0.6002981662750244},{"id":"https://openalex.org/keywords/electronic-health-record","display_name":"Electronic health record","score":0.485549658536911},{"id":"https://openalex.org/keywords/internal-medicine","display_name":"Internal medicine","score":0.3135911524295807},{"id":"https://openalex.org/keywords/immunology","display_name":"Immunology","score":0.24883747100830078},{"id":"https://openalex.org/keywords/health-care","display_name":"Health care","score":0.22294074296951294},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.14868339896202087}],"concepts":[{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.7795379161834717},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.7118510603904724},{"id":"https://openalex.org/C72563966","wikidata":"https://www.wikidata.org/wiki/Q1303415","display_name":"Cohort","level":2,"score":0.6635079979896545},{"id":"https://openalex.org/C195910791","wikidata":"https://www.wikidata.org/wiki/Q1324077","display_name":"Medical record","level":2,"score":0.6290013790130615},{"id":"https://openalex.org/C3013748606","wikidata":"https://www.wikidata.org/wiki/Q15787","display_name":"Human immunodeficiency virus (HIV)","level":2,"score":0.6135090589523315},{"id":"https://openalex.org/C40993552","wikidata":"https://www.wikidata.org/wiki/Q514654","display_name":"Gold standard (test)","level":2,"score":0.6002981662750244},{"id":"https://openalex.org/C3020144179","wikidata":"https://www.wikidata.org/wiki/Q10871684","display_name":"Electronic health record","level":3,"score":0.485549658536911},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.3135911524295807},{"id":"https://openalex.org/C203014093","wikidata":"https://www.wikidata.org/wiki/Q101929","display_name":"Immunology","level":1,"score":0.24883747100830078},{"id":"https://openalex.org/C160735492","wikidata":"https://www.wikidata.org/wiki/Q31207","display_name":"Health care","level":2,"score":0.22294074296951294},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.14868339896202087},{"id":"https://openalex.org/C50522688","wikidata":"https://www.wikidata.org/wiki/Q189833","display_name":"Economic growth","level":1,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000328","descriptor_name":"Adult","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000328","descriptor_name":"Adult","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000328","descriptor_name":"Adult","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012680","descriptor_name":"Sensitivity and Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012680","descriptor_name":"Sensitivity and Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012680","descriptor_name":"Sensitivity and Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015497","descriptor_name":"HIV-1","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015497","descriptor_name":"HIV-1","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015497","descriptor_name":"HIV-1","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015658","descriptor_name":"HIV Infections","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":false},{"descriptor_ui":"D015658","descriptor_name":"HIV Infections","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":false},{"descriptor_ui":"D015658","descriptor_name":"HIV Infections","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":false},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1093/jamia/ocx061","is_oa":true,"landing_page_url":"https://doi.org/10.1093/jamia/ocx061","pdf_url":"https://academic.oup.com/jamia/article-pdf/25/2/150/34150036/ocx061.pdf","source":{"id":"https://openalex.org/S129839026","display_name":"Journal of the American Medical Informatics Association","issn_l":"1067-5027","issn":["1067-5027","1527-974X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association","raw_type":"journal-article"},{"id":"pmid:28645207","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/28645207","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association : JAMIA","raw_type":null},{"id":"pmh:oai:europepmc.org:5382423","is_oa":false,"landing_page_url":"http://europepmc.org/pmc/articles/PMC6381767","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:6381767","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6381767","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Am Med Inform Assoc","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/jamia/ocx061","is_oa":true,"landing_page_url":"https://doi.org/10.1093/jamia/ocx061","pdf_url":"https://academic.oup.com/jamia/article-pdf/25/2/150/34150036/ocx061.pdf","source":{"id":"https://openalex.org/S129839026","display_name":"Journal of the American Medical Informatics Association","issn_l":"1067-5027","issn":["1067-5027","1527-974X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Good health and well-being","score":0.7400000095367432,"id":"https://metadata.un.org/sdg/3"}],"awards":[{"id":"https://openalex.org/G2671215840","display_name":null,"funder_award_id":"R56 HL126537 01","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G5546830276","display_name":null,"funder_award_id":"5P30 AI064518","funder_id":"https://openalex.org/F4320332480","funder_display_name":"Center for AIDS Research, Duke University"},{"id":"https://openalex.org/G6086773930","display_name":null,"funder_award_id":"AI064518","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G7783534678","display_name":null,"funder_award_id":"NIH R56","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G8450753135","display_name":null,"funder_award_id":"AI064518","funder_id":"https://openalex.org/F4320332480","funder_display_name":"Center for AIDS Research, Duke University"},{"id":"https://openalex.org/G8582359642","display_name":null,"funder_award_id":"5P30 AI064518","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"}],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320332480","display_name":"Center for AIDS Research, Duke University","ror":"https://ror.org/00py81415"},{"id":"https://openalex.org/F4320332582","display_name":"Center for AIDS Research, University of Washington","ror":"https://ror.org/00cvxb145"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2640294447.pdf","grobid_xml":"https://content.openalex.org/works/W2640294447.grobid-xml"},"referenced_works_count":24,"referenced_works":["https://openalex.org/W1505189748","https://openalex.org/W1522926410","https://openalex.org/W1591998101","https://openalex.org/W1982890131","https://openalex.org/W1986670194","https://openalex.org/W1991219585","https://openalex.org/W2010430808","https://openalex.org/W2023237394","https://openalex.org/W2041925939","https://openalex.org/W2089274188","https://openalex.org/W2091372246","https://openalex.org/W2110435976","https://openalex.org/W2114584591","https://openalex.org/W2129519751","https://openalex.org/W2133326391","https://openalex.org/W2164146524","https://openalex.org/W2317648909","https://openalex.org/W2414934948","https://openalex.org/W2615387281","https://openalex.org/W2615910120","https://openalex.org/W4299822171","https://openalex.org/W6630361698","https://openalex.org/W6635563403","https://openalex.org/W6647082285"],"related_works":["https://openalex.org/W2603773853","https://openalex.org/W2315085516","https://openalex.org/W2096903645","https://openalex.org/W1973460911","https://openalex.org/W2316407790","https://openalex.org/W2964295425","https://openalex.org/W4282824549","https://openalex.org/W2414148986","https://openalex.org/W2640294447","https://openalex.org/W4311480672"],"abstract_inverted_index":{"Background:":[0],"Electronic":[1],"medical":[2],"record":[3],"(EMR)":[4],"computed":[5,21],"algorithms":[6,22,53,77,112,243],"allow":[7],"investigators":[8],"to":[9,15,26,78,89,113,247,250],"screen":[10],"thousands":[11],"of":[12,30,44,63,99,117,126,136,150,191,212,226,231,234,258,260],"patient":[13],"records":[14],"identify":[16,79,90],"specific":[17],"disease":[18],"cases.":[19],"No":[20],"have":[23,244],"been":[24],"developed":[25,50],"detect":[27],"all":[28],"cases":[29,233],"human":[31],"immunodeficiency":[32],"virus":[33],"(HIV)":[34],"infection":[35,214,228],"using":[36],"administrative,":[37],"laboratory,":[38],"and":[39,57,87,106,119,134,140,181,189,196,202,204,219,240],"clinical":[40],"documentation":[41],"data":[42],"outside":[43],"the":[45,66,111,123,245,256],"Veterans":[46],"Health":[47,69],"Administration.":[48],"We":[49,73,109,130],"novel":[51,76],"EMR-based":[52,224],"for":[54,164,199,206,255],"HIV":[55,137,165,213,227],"detection":[56],"validated":[58,120],"them":[59],"in":[60,65,142],"a":[61,114],"cohort":[62,116],"subjects":[64],"Duke":[67],"University":[68],"System":[70],"(DUHS).":[71],"Methods:":[72],"created":[74],"2":[75,95,185],"HIV-infected":[80,91,235],"subjects.":[81],"Algorithm":[82,94,178,184,200,207],"1":[83,179,201],"used":[84,96],"laboratory":[85,107],"studies":[86],"medications":[88],"subjects,":[92],"whereas":[93],"International":[97],"Classification":[98],"Diseases,":[100],"Ninth":[101],"Revision":[102],"(ICD-9)":[103],"codes,":[104],"medications,":[105],"testing.":[108],"applied":[110],"well-characterized":[115],"patients":[118,143,153,160,261],"both":[121,174],"against":[122],"gold":[124],"standard":[125],"physician":[127],"chart":[128],"review.":[129],"determined":[131],"sensitivity,":[132],"specificity,":[133],"prevalence":[135,211],"between":[138,217],"2007":[139,218],"2011":[141,220],"seen":[144],"at":[145,215],"DUHS.":[146],"Results:":[147],"A":[148],"total":[149],"172":[151],"271":[152],"were":[154,171,194],"detected":[155],"with":[156,237],"complete":[157],"data;":[158],"1063":[159],"met":[161],"algorithm":[162,193],"criteria":[163],"infection.":[166],"In":[167],"all,":[168],"970":[169],"individuals":[170],"identified":[172],"by":[173,177,183],"algorithms,":[175],"78":[176],"alone,":[180],"15":[182],"alone.":[186],"The":[187,209],"sensitivity":[188,239],"specificity":[190],"each":[192],"78%":[195],"99%,":[197],"respectively,":[198],"77%":[203],"100%":[205],"2.":[208],"estimated":[210],"DUHS":[216],"was":[221],"0.6%.":[222],"Conclusions:":[223],"phenotypes":[225],"are":[229],"capable":[230],"detecting":[232],"adults":[236],"good":[238],"specificity.":[241],"These":[242],"potential":[246],"be":[248],"adapted":[249],"other":[251],"EMR":[252,263],"systems,":[253],"allowing":[254],"creation":[257],"cohorts":[259],"across":[262],"systems.":[264]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":5},{"year":2023,"cited_by_count":4},{"year":2022,"cited_by_count":8},{"year":2021,"cited_by_count":12},{"year":2020,"cited_by_count":6},{"year":2019,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2012,"cited_by_count":1}],"updated_date":"2026-04-29T09:16:38.111599","created_date":"2025-10-10T00:00:00"}
