{"id":"https://openalex.org/W2317648909","doi":"https://doi.org/10.1093/jamia/ocv202","title":"PheKB: a catalog and workflow for creating electronic phenotype algorithms for transportability","display_name":"PheKB: a catalog and workflow for creating electronic phenotype algorithms for transportability","publication_year":2016,"publication_date":"2016-03-28","ids":{"openalex":"https://openalex.org/W2317648909","doi":"https://doi.org/10.1093/jamia/ocv202","mag":"2317648909","pmid":"https://pubmed.ncbi.nlm.nih.gov/27026615"},"language":"en","primary_location":{"id":"doi:10.1093/jamia/ocv202","is_oa":true,"landing_page_url":"https://doi.org/10.1093/jamia/ocv202","pdf_url":"https://academic.oup.com/jamia/article-pdf/23/6/1046/7919789/ocv202.pdf","source":{"id":"https://openalex.org/S129839026","display_name":"Journal of the American Medical Informatics Association","issn_l":"1067-5027","issn":["1067-5027","1527-974X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/jamia/article-pdf/23/6/1046/7919789/ocv202.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5086205928","display_name":"Jacqueline Kirby","orcid":null},"institutions":[{"id":"https://openalex.org/I901861585","display_name":"Vanderbilt University Medical Center","ror":"https://ror.org/05dq2gs74","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210162197","https://openalex.org/I901861585"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Jacqueline C Kirby","raw_affiliation_strings":["Vanderbilt University Medical Center, Nashville, TN, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Vanderbilt University Medical Center, Nashville, TN, USA","institution_ids":["https://openalex.org/I901861585"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066275258","display_name":"Peter Speltz","orcid":null},"institutions":[{"id":"https://openalex.org/I901861585","display_name":"Vanderbilt University Medical Center","ror":"https://ror.org/05dq2gs74","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210162197","https://openalex.org/I901861585"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Peter Speltz","raw_affiliation_strings":["Vanderbilt University Medical Center, Nashville, TN, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Vanderbilt University Medical Center, Nashville, TN, USA","institution_ids":["https://openalex.org/I901861585"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071369319","display_name":"Luke V. Rasmussen","orcid":"https://orcid.org/0000-0002-4497-8049"},"institutions":[{"id":"https://openalex.org/I111979921","display_name":"Northwestern University","ror":"https://ror.org/000e0be47","country_code":"US","type":"education","lineage":["https://openalex.org/I111979921"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Luke V Rasmussen","raw_affiliation_strings":["Northwestern University, Feinberg School of Medicine, Chicago, IL, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Northwestern University, Feinberg School of Medicine, Chicago, IL, USA","institution_ids":["https://openalex.org/I111979921"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061228305","display_name":"Melissa Basford","orcid":"https://orcid.org/0000-0002-0703-2422"},"institutions":[{"id":"https://openalex.org/I901861585","display_name":"Vanderbilt University Medical Center","ror":"https://ror.org/05dq2gs74","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210162197","https://openalex.org/I901861585"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Melissa Basford","raw_affiliation_strings":["Vanderbilt University Medical Center, Nashville, TN, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Vanderbilt University Medical Center, Nashville, TN, USA","institution_ids":["https://openalex.org/I901861585"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065704891","display_name":"Omri Gottesman","orcid":null},"institutions":[{"id":"https://openalex.org/I98704320","display_name":"Icahn School of Medicine at Mount Sinai","ror":"https://ror.org/04a9tmd77","country_code":"US","type":"education","lineage":["https://openalex.org/I1320796813","https://openalex.org/I98704320"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Omri Gottesman","raw_affiliation_strings":["Icahn School of Medicine at Mount Sinai, New York, NY, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Icahn School of Medicine at Mount Sinai, New York, NY, USA","institution_ids":["https://openalex.org/I98704320"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088183118","display_name":"Peggy Peissig","orcid":"https://orcid.org/0000-0003-4156-0189"},"institutions":[{"id":"https://openalex.org/I1315135799","display_name":"Marshfield Clinic","ror":"https://ror.org/025chrz76","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1315135799"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Peggy L Peissig","raw_affiliation_strings":["Marshfield Clinic Research Foundation, Marshfield, WI, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Marshfield Clinic Research Foundation, Marshfield, WI, USA","institution_ids":["https://openalex.org/I1315135799"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007540286","display_name":"Jennifer A. Pacheco","orcid":"https://orcid.org/0000-0001-8021-5818"},"institutions":[{"id":"https://openalex.org/I111979921","display_name":"Northwestern University","ror":"https://ror.org/000e0be47","country_code":"US","type":"education","lineage":["https://openalex.org/I111979921"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jennifer A Pacheco","raw_affiliation_strings":["Northwestern University, Feinberg School of Medicine, Chicago, IL, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Northwestern University, Feinberg School of Medicine, Chicago, IL, USA","institution_ids":["https://openalex.org/I111979921"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062230681","display_name":"Gerard Tromp","orcid":"https://orcid.org/0000-0002-7761-0806"},"institutions":[{"id":"https://openalex.org/I54713919","display_name":"Geisinger Health System","ror":"https://ror.org/02qdbgx97","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I54713919"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Gerard Tromp","raw_affiliation_strings":["Geisinger Health System, Danville, PA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Geisinger Health System, Danville, PA, USA","institution_ids":["https://openalex.org/I54713919"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051691741","display_name":"Jyotishman Pathak","orcid":"https://orcid.org/0000-0002-4856-410X"},"institutions":[{"id":"https://openalex.org/I4210125099","display_name":"Mayo Clinic in Arizona","ror":"https://ror.org/03jp40720","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1330342723","https://openalex.org/I4210125099"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jyotishman Pathak","raw_affiliation_strings":["Mayo Clinic, Rochester, MN, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Mayo Clinic, Rochester, MN, USA","institution_ids":["https://openalex.org/I4210125099"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5041212198","display_name":"David Carrell","orcid":"https://orcid.org/0000-0002-8471-0928"},"institutions":[{"id":"https://openalex.org/I150117356","display_name":"Kaiser Permanente Washington Health Research Institute","ror":"https://ror.org/0027frf26","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I150117356"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"David S Carrell","raw_affiliation_strings":["Group Health Research Institute, Seattle, WA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Group Health Research Institute, Seattle, WA, USA","institution_ids":["https://openalex.org/I150117356"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049238181","display_name":"Stephen B. Ellis","orcid":"https://orcid.org/0000-0001-6944-2876"},"institutions":[{"id":"https://openalex.org/I98704320","display_name":"Icahn School of Medicine at Mount Sinai","ror":"https://ror.org/04a9tmd77","country_code":"US","type":"education","lineage":["https://openalex.org/I1320796813","https://openalex.org/I98704320"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Stephen B Ellis","raw_affiliation_strings":["Icahn School of Medicine at Mount Sinai, New York, NY, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Icahn School of Medicine at Mount Sinai, New York, NY, USA","institution_ids":["https://openalex.org/I98704320"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5041194209","display_name":"Todd Lingren","orcid":"https://orcid.org/0000-0003-0311-7100"},"institutions":[{"id":"https://openalex.org/I1285204247","display_name":"Cincinnati Children's Hospital Medical Center","ror":"https://ror.org/01hcyya48","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1285204247"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Todd Lingren","raw_affiliation_strings":["Cincinnati Children\u2019s Hospital Medical Center, Cincinnati, OH, USA","Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Cincinnati Children\u2019s Hospital Medical Center, Cincinnati, OH, USA","institution_ids":["https://openalex.org/I1285204247"]},{"raw_affiliation_string":"Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA","institution_ids":["https://openalex.org/I1285204247"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111969568","display_name":"Will K Thompson","orcid":null},"institutions":[{"id":"https://openalex.org/I111979921","display_name":"Northwestern University","ror":"https://ror.org/000e0be47","country_code":"US","type":"education","lineage":["https://openalex.org/I111979921"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Will K Thompson","raw_affiliation_strings":["Northwestern University, Feinberg School of Medicine, Chicago, IL, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Northwestern University, Feinberg School of Medicine, Chicago, IL, USA","institution_ids":["https://openalex.org/I111979921"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087865794","display_name":"Guergana Savova","orcid":"https://orcid.org/0000-0002-5887-200X"},"institutions":[{"id":"https://openalex.org/I1288882113","display_name":"Boston Children's Hospital","ror":"https://ror.org/00dvg7y05","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1288882113"]},{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Guergana Savova","raw_affiliation_strings":["Boston Children\u2019s Hospital and Harvard Medical School, Boston, MA, USA","Boston Children's Hospital and Harvard Medical School, Boston, MA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Boston Children\u2019s Hospital and Harvard Medical School, Boston, MA, USA","institution_ids":["https://openalex.org/I1288882113","https://openalex.org/I136199984"]},{"raw_affiliation_string":"Boston Children's Hospital and Harvard Medical School, Boston, MA, USA","institution_ids":["https://openalex.org/I1288882113","https://openalex.org/I136199984"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020266650","display_name":"Jonathan L. Haines","orcid":"https://orcid.org/0000-0002-4351-4728"},"institutions":[{"id":"https://openalex.org/I58956616","display_name":"Case Western Reserve University","ror":"https://ror.org/051fd9666","country_code":"US","type":"education","lineage":["https://openalex.org/I58956616"]},{"id":"https://openalex.org/I93393672","display_name":"Western University of Health Sciences","ror":"https://ror.org/05167c961","country_code":"US","type":"education","lineage":["https://openalex.org/I93393672"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jonathan Haines","raw_affiliation_strings":["Case Western University, Cleveland, OH, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Case Western University, Cleveland, OH, USA","institution_ids":["https://openalex.org/I58956616","https://openalex.org/I93393672"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058141203","display_name":"Dan M. Roden","orcid":"https://orcid.org/0000-0002-6302-0389"},"institutions":[{"id":"https://openalex.org/I901861585","display_name":"Vanderbilt University Medical Center","ror":"https://ror.org/05dq2gs74","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210162197","https://openalex.org/I901861585"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Dan M Roden","raw_affiliation_strings":["Vanderbilt University Medical Center, Nashville, TN, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Vanderbilt University Medical Center, Nashville, TN, USA","institution_ids":["https://openalex.org/I901861585"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016939870","display_name":"Paul A. Harris","orcid":"https://orcid.org/0000-0002-1744-2011"},"institutions":[{"id":"https://openalex.org/I901861585","display_name":"Vanderbilt University Medical Center","ror":"https://ror.org/05dq2gs74","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210162197","https://openalex.org/I901861585"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Paul A Harris","raw_affiliation_strings":["Vanderbilt University Medical Center, Nashville, TN, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Vanderbilt University Medical Center, Nashville, TN, USA","institution_ids":["https://openalex.org/I901861585"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5070908224","display_name":"Joshua C. Denny","orcid":"https://orcid.org/0000-0002-3049-7332"},"institutions":[{"id":"https://openalex.org/I901861585","display_name":"Vanderbilt University Medical Center","ror":"https://ror.org/05dq2gs74","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210162197","https://openalex.org/I901861585"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Joshua C Denny","raw_affiliation_strings":["Vanderbilt University Medical Center, Nashville, TN, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Vanderbilt University Medical Center, Nashville, TN, USA","institution_ids":["https://openalex.org/I901861585"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":18,"corresponding_author_ids":["https://openalex.org/A5086205928"],"corresponding_institution_ids":["https://openalex.org/I901861585"],"apc_list":{"value":3967,"currency":"USD","value_usd":3967},"apc_paid":null,"fwci":31.6931,"has_fulltext":false,"cited_by_count":375,"citation_normalized_percentile":{"value":0.99734223,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":100},"biblio":{"volume":"23","issue":"6","first_page":"1046","last_page":"1052"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11642","display_name":"Genomics and Rare Diseases","score":0.33640000224113464,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11642","display_name":"Genomics and Rare Diseases","score":0.33640000224113464,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10350","display_name":"Electronic Health Records Systems","score":0.2822999954223633,"subfield":{"id":"https://openalex.org/subfields/3605","display_name":"Health Information Management"},"field":{"id":"https://openalex.org/fields/36","display_name":"Health Professions"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.12449999898672104,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.8765259981155396},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6934504508972168},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.6526042819023132},{"id":"https://openalex.org/keywords/electronic-health-record","display_name":"Electronic health record","score":0.6050615906715393},{"id":"https://openalex.org/keywords/health-care","display_name":"Health care","score":0.42347434163093567},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.3302290141582489},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.323827862739563},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.2542365491390228}],"concepts":[{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.8765259981155396},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6934504508972168},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.6526042819023132},{"id":"https://openalex.org/C3020144179","wikidata":"https://www.wikidata.org/wiki/Q10871684","display_name":"Electronic health record","level":3,"score":0.6050615906715393},{"id":"https://openalex.org/C160735492","wikidata":"https://www.wikidata.org/wiki/Q31207","display_name":"Health care","level":2,"score":0.42347434163093567},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.3302290141582489},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.323827862739563},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.2542365491390228},{"id":"https://openalex.org/C50522688","wikidata":"https://www.wikidata.org/wiki/Q189833","display_name":"Economic growth","level":1,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D038801","descriptor_name":"International Classification of Diseases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D038801","descriptor_name":"International Classification of Diseases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D038801","descriptor_name":"International Classification of Diseases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D038801","descriptor_name":"International Classification of Diseases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D038801","descriptor_name":"International Classification of Diseases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051188","descriptor_name":"Knowledge Bases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D051188","descriptor_name":"Knowledge Bases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D051188","descriptor_name":"Knowledge Bases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D051188","descriptor_name":"Knowledge Bases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D051188","descriptor_name":"Knowledge Bases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/jamia/ocv202","is_oa":true,"landing_page_url":"https://doi.org/10.1093/jamia/ocv202","pdf_url":"https://academic.oup.com/jamia/article-pdf/23/6/1046/7919789/ocv202.pdf","source":{"id":"https://openalex.org/S129839026","display_name":"Journal of the American Medical Informatics Association","issn_l":"1067-5027","issn":["1067-5027","1527-974X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association","raw_type":"journal-article"},{"id":"pmid:27026615","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/27026615","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association : JAMIA","raw_type":null},{"id":"pmh:oai:open-archive.highwire.org:jaminfo:23/6/1046","is_oa":false,"landing_page_url":"http://jamia.oxfordjournals.org/cgi/content/short/23/6/1046","pdf_url":null,"source":{"id":"https://openalex.org/S4406923041","display_name":"HighWire Press Open Archive","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"TEXT"},{"id":"pmh:oai:pubmedcentral.nih.gov:5070514","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5070514","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Am Med Inform Assoc","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/jamia/ocv202","is_oa":true,"landing_page_url":"https://doi.org/10.1093/jamia/ocv202","pdf_url":"https://academic.oup.com/jamia/article-pdf/23/6/1046/7919789/ocv202.pdf","source":{"id":"https://openalex.org/S129839026","display_name":"Journal of the American Medical Informatics Association","issn_l":"1067-5027","issn":["1067-5027","1527-974X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/17","score":0.4399999976158142,"display_name":"Partnerships for the goals"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320337348","display_name":"National Human Genome Research Institute","ror":"https://ror.org/00baak391"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2317648909.pdf","grobid_xml":"https://content.openalex.org/works/W2317648909.grobid-xml"},"referenced_works_count":53,"referenced_works":["https://openalex.org/W70606898","https://openalex.org/W165823196","https://openalex.org/W193168897","https://openalex.org/W284083829","https://openalex.org/W1522902637","https://openalex.org/W1590194639","https://openalex.org/W1808652302","https://openalex.org/W1973234126","https://openalex.org/W1974660612","https://openalex.org/W1983141380","https://openalex.org/W1987271327","https://openalex.org/W2001667292","https://openalex.org/W2007739294","https://openalex.org/W2008998978","https://openalex.org/W2016104730","https://openalex.org/W2027867013","https://openalex.org/W2029119894","https://openalex.org/W2042809656","https://openalex.org/W2043160805","https://openalex.org/W2050281872","https://openalex.org/W2070137602","https://openalex.org/W2070356350","https://openalex.org/W2074931707","https://openalex.org/W2077057017","https://openalex.org/W2084127438","https://openalex.org/W2089274188","https://openalex.org/W2096455952","https://openalex.org/W2099119910","https://openalex.org/W2101461562","https://openalex.org/W2102729801","https://openalex.org/W2105637130","https://openalex.org/W2105714645","https://openalex.org/W2107021160","https://openalex.org/W2113105800","https://openalex.org/W2113952938","https://openalex.org/W2121382432","https://openalex.org/W2122836712","https://openalex.org/W2131668595","https://openalex.org/W2134027168","https://openalex.org/W2134834251","https://openalex.org/W2142071150","https://openalex.org/W2148902069","https://openalex.org/W2151868700","https://openalex.org/W2154048976","https://openalex.org/W2164146524","https://openalex.org/W2238456835","https://openalex.org/W2413868409","https://openalex.org/W6602826705","https://openalex.org/W6606801968","https://openalex.org/W6607975088","https://openalex.org/W6635305044","https://openalex.org/W6657576633","https://openalex.org/W6675058760"],"related_works":["https://openalex.org/W1981780420","https://openalex.org/W2182707996","https://openalex.org/W45233828","https://openalex.org/W2964988449","https://openalex.org/W2397952901","https://openalex.org/W2029380707","https://openalex.org/W4255934811","https://openalex.org/W2465382974","https://openalex.org/W2034489805","https://openalex.org/W1165680166"],"abstract_inverted_index":{"OBJECTIVE:":[0],"Health":[1],"care":[2,51,253],"generated":[3,254],"data":[4,211],"have":[5,125,136],"become":[6],"an":[7,68],"important":[8],"source":[9],"for":[10,248],"clinical":[11],"and":[12,18,36,46,53,60,77,91,97,112,122,135,156,222,244],"genomic":[13],"research.":[14],"Often,":[15],"investigators":[16],"create":[17],"iteratively":[19],"refine":[20],"phenotype":[21,80,110],"algorithms":[22,39,90,111,114,161,205,223,247],"to":[23,186,206,231],"achieve":[24,40],"high":[25,220],"positive":[26],"predictive":[27],"values":[28],"(PPVs)":[29],"or":[30],"sensitivity,":[31],"thereby":[32],"identifying":[33],"valid":[34],"cases":[35],"controls.":[37],"These":[38,197],"the":[41,57,63,72,84,148,166,175],"greatest":[42],"utility":[43],"when":[44,172],"validated":[45],"shared":[47],"by":[48,139,154],"multiple":[49],"health":[50,209,214,252],"systems.Materials":[52],"Methods":[54],"We":[55,82],"report":[56],"current":[58],"status":[59],"impact":[61],"of":[62,74,103,120,144,204,246],"Phenotype":[64],"KnowledgeBase":[65],"(PheKB,":[66],"http://phekb.org),":[67],"online":[69],"environment":[70],"supporting":[71],"workflow":[73],"building,":[75],"sharing,":[76],"validating":[78],"electronic":[79,208],"algorithms.":[81],"analyze":[83],"most":[85,149],"frequent":[86],"components":[87],"used":[88,151],"in":[89,115,131],"their":[92],"performance":[93,164],"at":[94,174,225],"authoring":[95,176],"institutions":[96,177],"secondary":[98],"implementation":[99,187],"sites.":[100],"RESULTS:":[101],"As":[102],"June":[104],"2015,":[105],"PheKB":[106,239],"contained":[107],"30":[108],"finalized":[109],"62":[113],"development":[116],"spanning":[117],"a":[118,132,201,236],"range":[119,203],"traits":[121],"diseases.":[123],"Phenotypes":[124],"had":[126],"over":[127],"3500":[128],"unique":[129],"views":[130],"6-month":[133],"period":[134],"been":[137],"reused":[138],"other":[140],"institutions.":[141],"International":[142],"Classification":[143],"Disease":[145],"codes":[146],"were":[147],"frequently":[150],"component,":[152],"followed":[153],"medications":[155],"natural":[157],"language":[158],"processing.":[159],"Among":[160],"with":[162,219],"published":[163],"data,":[165],"median":[167],"PPV":[168],"was":[169],"nearly":[170],"identical":[171],"evaluated":[173],"(n":[178,189],"=":[179,190],"44;":[180],"case":[181,192],"96.0%,":[182],"control":[183,194],"100%)":[184],"compared":[185],"sites":[188],"40;":[191],"97.5%,":[193],"100%).":[195],"DISCUSSION:":[196],"results":[198],"demonstrate":[199],"that":[200],"broad":[202],"mine":[207],"record":[210],"from":[212],"different":[213],"systems":[215],"can":[216],"be":[217],"developed":[218,224],"PPV,":[221],"one":[226],"site":[227],"are":[228],"generally":[229],"transportable":[230],"others.":[232],"CONCLUSION:":[233],"By":[234],"providing":[235],"central":[237],"repository,":[238],"enables":[240],"improved":[241],"development,":[242],"transportability,":[243],"validity":[245],"research-grade":[249],"phenotypes":[250],"using":[251],"data.":[255]},"counts_by_year":[{"year":2026,"cited_by_count":10},{"year":2025,"cited_by_count":31},{"year":2024,"cited_by_count":31},{"year":2023,"cited_by_count":44},{"year":2022,"cited_by_count":51},{"year":2021,"cited_by_count":52},{"year":2020,"cited_by_count":49},{"year":2019,"cited_by_count":47},{"year":2018,"cited_by_count":32},{"year":2017,"cited_by_count":27},{"year":2016,"cited_by_count":1}],"updated_date":"2026-04-29T09:16:38.111599","created_date":"2025-10-10T00:00:00"}
