{"id":"https://openalex.org/W2121628382","doi":"https://doi.org/10.1093/jamia/ocv070","title":"Review and evaluation of electronic health records-driven phenotype algorithm authoring tools for clinical and translational research","display_name":"Review and evaluation of electronic health records-driven phenotype algorithm authoring tools for clinical and translational research","publication_year":2015,"publication_date":"2015-07-29","ids":{"openalex":"https://openalex.org/W2121628382","doi":"https://doi.org/10.1093/jamia/ocv070","mag":"2121628382","pmid":"https://pubmed.ncbi.nlm.nih.gov/26224336"},"language":"en","primary_location":{"id":"doi:10.1093/jamia/ocv070","is_oa":true,"landing_page_url":"https://doi.org/10.1093/jamia/ocv070","pdf_url":"https://academic.oup.com/jamia/article-pdf/22/6/1251/34145876/ocv070.pdf","source":{"id":"https://openalex.org/S129839026","display_name":"Journal of the American Medical Informatics Association","issn_l":"1067-5027","issn":["1067-5027","1527-974X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association","raw_type":"journal-article"},"type":"review","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/jamia/article-pdf/22/6/1251/34145876/ocv070.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5057917186","display_name":"Jie Xu","orcid":"https://orcid.org/0000-0001-7682-4776"},"institutions":[{"id":"https://openalex.org/I111979921","display_name":"Northwestern University","ror":"https://ror.org/000e0be47","country_code":"US","type":"education","lineage":["https://openalex.org/I111979921"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jie Xu","raw_affiliation_strings":["Department of Medicine, Feinberg School of Medicine, Northwestern University, Chicago, IL, USA","Department of Medicine; Feinberg School of Medicine; Northwestern University; Chicago; IL; USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Medicine, Feinberg School of Medicine, Northwestern University, Chicago, IL, USA","institution_ids":["https://openalex.org/I111979921"]},{"raw_affiliation_string":"Department of Medicine; Feinberg School of Medicine; Northwestern University; Chicago; IL; USA","institution_ids":["https://openalex.org/I111979921"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071369319","display_name":"Luke V. Rasmussen","orcid":"https://orcid.org/0000-0002-4497-8049"},"institutions":[{"id":"https://openalex.org/I111979921","display_name":"Northwestern University","ror":"https://ror.org/000e0be47","country_code":"US","type":"education","lineage":["https://openalex.org/I111979921"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Luke V Rasmussen","raw_affiliation_strings":["Department of Preventive Medicine, Feinberg School of Medicine, Northwestern University, Chicago, IL, USA","Department of Preventive Medicine, Feinberg School of Medicine, Northwestern University, Chicago, IL, USA;"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Preventive Medicine, Feinberg School of Medicine, Northwestern University, Chicago, IL, USA","institution_ids":["https://openalex.org/I111979921"]},{"raw_affiliation_string":"Department of Preventive Medicine, Feinberg School of Medicine, Northwestern University, Chicago, IL, USA;","institution_ids":["https://openalex.org/I111979921"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042542848","display_name":"Pamela L Shaw","orcid":"https://orcid.org/0000-0003-3698-1608"},"institutions":[{"id":"https://openalex.org/I111979921","display_name":"Northwestern University","ror":"https://ror.org/000e0be47","country_code":"US","type":"education","lineage":["https://openalex.org/I111979921"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Pamela L Shaw","raw_affiliation_strings":["Galter Health Science Library, Clinical and Translational Sciences Institute (NUCATS), Feinberg School of Medicine, Northwestern University, Chicago, IL, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Galter Health Science Library, Clinical and Translational Sciences Institute (NUCATS), Feinberg School of Medicine, Northwestern University, Chicago, IL, USA","institution_ids":["https://openalex.org/I111979921"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007963072","display_name":"Guoqian Jiang","orcid":"https://orcid.org/0000-0003-2940-0019"},"institutions":[{"id":"https://openalex.org/I4210146710","display_name":"Mayo Clinic in Florida","ror":"https://ror.org/03zzw1w08","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1330342723","https://openalex.org/I4210146710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Guoqian Jiang","raw_affiliation_strings":["Department of Health Sciences Research, Mayo Clinic, Rochester, MN, USA","Department of Health Sciences Research, Mayo Clinic, Rochester, MN USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Health Sciences Research, Mayo Clinic, Rochester, MN, USA","institution_ids":["https://openalex.org/I4210146710"]},{"raw_affiliation_string":"Department of Health Sciences Research, Mayo Clinic, Rochester, MN USA","institution_ids":["https://openalex.org/I4210146710"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044998374","display_name":"Richard C. Kiefer","orcid":"https://orcid.org/0000-0002-0100-5829"},"institutions":[{"id":"https://openalex.org/I4210146710","display_name":"Mayo Clinic in Florida","ror":"https://ror.org/03zzw1w08","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1330342723","https://openalex.org/I4210146710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Richard C Kiefer","raw_affiliation_strings":["Department of Health Sciences Research, Mayo Clinic, Rochester, MN, USA","Department of Health Sciences Research, Mayo Clinic, Rochester, MN USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Health Sciences Research, Mayo Clinic, Rochester, MN, USA","institution_ids":["https://openalex.org/I4210146710"]},{"raw_affiliation_string":"Department of Health Sciences Research, Mayo Clinic, Rochester, MN USA","institution_ids":["https://openalex.org/I4210146710"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002130031","display_name":"Huan Mo","orcid":"https://orcid.org/0000-0001-6029-458X"},"institutions":[{"id":"https://openalex.org/I200719446","display_name":"Vanderbilt University","ror":"https://ror.org/02vm5rt34","country_code":"US","type":"education","lineage":["https://openalex.org/I200719446"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Huan Mo","raw_affiliation_strings":["Department of Biomedical Informatics, School of Medicine, Vanderbilt University, Nashville, TN, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedical Informatics, School of Medicine, Vanderbilt University, Nashville, TN, USA","institution_ids":["https://openalex.org/I200719446"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007540286","display_name":"Jennifer A. Pacheco","orcid":"https://orcid.org/0000-0001-8021-5818"},"institutions":[{"id":"https://openalex.org/I111979921","display_name":"Northwestern University","ror":"https://ror.org/000e0be47","country_code":"US","type":"education","lineage":["https://openalex.org/I111979921"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jennifer A Pacheco","raw_affiliation_strings":["Center for Genetic Medicine, Feinberg School of Medicine, Northwestern University, Chicago, IL, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Genetic Medicine, Feinberg School of Medicine, Northwestern University, Chicago, IL, USA","institution_ids":["https://openalex.org/I111979921"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066275258","display_name":"Peter Speltz","orcid":null},"institutions":[{"id":"https://openalex.org/I200719446","display_name":"Vanderbilt University","ror":"https://ror.org/02vm5rt34","country_code":"US","type":"education","lineage":["https://openalex.org/I200719446"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Peter Speltz","raw_affiliation_strings":["Department of Biomedical Informatics, School of Medicine, Vanderbilt University, Nashville, TN, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedical Informatics, School of Medicine, Vanderbilt University, Nashville, TN, USA","institution_ids":["https://openalex.org/I200719446"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073074181","display_name":"Qian Zhu","orcid":"https://orcid.org/0000-0002-4858-6333"},"institutions":[{"id":"https://openalex.org/I79272384","display_name":"University of Maryland, Baltimore County","ror":"https://ror.org/02qskvh78","country_code":"US","type":"education","lineage":["https://openalex.org/I79272384"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Qian Zhu","raw_affiliation_strings":["Department of Information Systems, University of Maryland, Baltimore County (UMBC), Baltimore, MD, USA","Department of Information Systems , University of Maryland, Baltimore County (UMBC) , Baltimore, MD, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Information Systems, University of Maryland, Baltimore County (UMBC), Baltimore, MD, USA","institution_ids":["https://openalex.org/I79272384"]},{"raw_affiliation_string":"Department of Information Systems , University of Maryland, Baltimore County (UMBC) , Baltimore, MD, USA","institution_ids":["https://openalex.org/I79272384"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070908224","display_name":"Joshua C. Denny","orcid":"https://orcid.org/0000-0002-3049-7332"},"institutions":[{"id":"https://openalex.org/I200719446","display_name":"Vanderbilt University","ror":"https://ror.org/02vm5rt34","country_code":"US","type":"education","lineage":["https://openalex.org/I200719446"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Joshua C Denny","raw_affiliation_strings":["Department of Biomedical Informatics, School of Medicine, Vanderbilt University, Nashville, TN, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedical Informatics, School of Medicine, Vanderbilt University, Nashville, TN, USA","institution_ids":["https://openalex.org/I200719446"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051691741","display_name":"Jyotishman Pathak","orcid":"https://orcid.org/0000-0002-4856-410X"},"institutions":[{"id":"https://openalex.org/I4210146710","display_name":"Mayo Clinic in Florida","ror":"https://ror.org/03zzw1w08","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1330342723","https://openalex.org/I4210146710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jyotishman Pathak","raw_affiliation_strings":["Department of Health Sciences Research, Mayo Clinic, Rochester, MN, USA","Department of Health Sciences Research, Mayo Clinic, Rochester, MN USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Health Sciences Research, Mayo Clinic, Rochester, MN, USA","institution_ids":["https://openalex.org/I4210146710"]},{"raw_affiliation_string":"Department of Health Sciences Research, Mayo Clinic, Rochester, MN USA","institution_ids":["https://openalex.org/I4210146710"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064792728","display_name":"William K. Thompson","orcid":"https://orcid.org/0000-0002-5603-423X"},"institutions":[{"id":"https://openalex.org/I1339509835","display_name":"NorthShore University HealthSystem","ror":"https://ror.org/04tpp9d61","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1339509835"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"William K Thompson","raw_affiliation_strings":["Center for Biomedical Research Informatics, NorthShore University Health System, Evanston, IL, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Biomedical Research Informatics, NorthShore University Health System, Evanston, IL, USA","institution_ids":["https://openalex.org/I1339509835"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5022780134","display_name":"Enid Montague","orcid":"https://orcid.org/0009-0005-7387-4248"},"institutions":[{"id":"https://openalex.org/I111979921","display_name":"Northwestern University","ror":"https://ror.org/000e0be47","country_code":"US","type":"education","lineage":["https://openalex.org/I111979921"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Enid Montague","raw_affiliation_strings":["Department of Medicine, Feinberg School of Medicine, Northwestern University, Chicago, IL, USA","Department of Medicine; Feinberg School of Medicine; Northwestern University; Chicago; IL; USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Medicine, Feinberg School of Medicine, Northwestern University, Chicago, IL, USA","institution_ids":["https://openalex.org/I111979921"]},{"raw_affiliation_string":"Department of Medicine; Feinberg School of Medicine; Northwestern University; Chicago; IL; USA","institution_ids":["https://openalex.org/I111979921"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":13,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":3967,"currency":"USD","value_usd":3967},"apc_paid":null,"fwci":10.5475,"has_fulltext":false,"cited_by_count":39,"citation_normalized_percentile":{"value":0.97797888,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"22","issue":"6","first_page":"1251","last_page":"1260"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10350","display_name":"Electronic Health Records Systems","score":0.7444999814033508,"subfield":{"id":"https://openalex.org/subfields/3605","display_name":"Health Information Management"},"field":{"id":"https://openalex.org/fields/36","display_name":"Health Professions"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10350","display_name":"Electronic Health Records Systems","score":0.7444999814033508,"subfield":{"id":"https://openalex.org/subfields/3605","display_name":"Health Information Management"},"field":{"id":"https://openalex.org/fields/36","display_name":"Health Professions"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11642","display_name":"Genomics and Rare Diseases","score":0.11240000277757645,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.02500000037252903,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/health-records","display_name":"Health records","score":0.6306673288345337},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5780683755874634},{"id":"https://openalex.org/keywords/electronic-health-record","display_name":"Electronic health record","score":0.5777766704559326},{"id":"https://openalex.org/keywords/translational-research","display_name":"Translational research","score":0.49604520201683044},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.3642822802066803},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.27074697613716125},{"id":"https://openalex.org/keywords/health-care","display_name":"Health care","score":0.17084398865699768},{"id":"https://openalex.org/keywords/political-science","display_name":"Political science","score":0.07768863439559937},{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.07687905430793762}],"concepts":[{"id":"https://openalex.org/C3019952477","wikidata":"https://www.wikidata.org/wiki/Q1324077","display_name":"Health records","level":3,"score":0.6306673288345337},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5780683755874634},{"id":"https://openalex.org/C3020144179","wikidata":"https://www.wikidata.org/wiki/Q10871684","display_name":"Electronic health record","level":3,"score":0.5777766704559326},{"id":"https://openalex.org/C128544194","wikidata":"https://www.wikidata.org/wiki/Q474859","display_name":"Translational research","level":2,"score":0.49604520201683044},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3642822802066803},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.27074697613716125},{"id":"https://openalex.org/C160735492","wikidata":"https://www.wikidata.org/wiki/Q31207","display_name":"Health care","level":2,"score":0.17084398865699768},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.07768863439559937},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.07687905430793762},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D035843","descriptor_name":"Biomedical Research","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D035843","descriptor_name":"Biomedical Research","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D035843","descriptor_name":"Biomedical Research","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057170","descriptor_name":"Translational Research, Biomedical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057170","descriptor_name":"Translational Research, Biomedical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057170","descriptor_name":"Translational Research, Biomedical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/jamia/ocv070","is_oa":true,"landing_page_url":"https://doi.org/10.1093/jamia/ocv070","pdf_url":"https://academic.oup.com/jamia/article-pdf/22/6/1251/34145876/ocv070.pdf","source":{"id":"https://openalex.org/S129839026","display_name":"Journal of the American Medical Informatics Association","issn_l":"1067-5027","issn":["1067-5027","1527-974X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association","raw_type":"journal-article"},{"id":"pmid:26224336","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/26224336","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association : JAMIA","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:5009915","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5009915","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Am Med Inform Assoc","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/jamia/ocv070","is_oa":true,"landing_page_url":"https://doi.org/10.1093/jamia/ocv070","pdf_url":"https://academic.oup.com/jamia/article-pdf/22/6/1251/34145876/ocv070.pdf","source":{"id":"https://openalex.org/S129839026","display_name":"Journal of the American Medical Informatics Association","issn_l":"1067-5027","issn":["1067-5027","1527-974X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":90,"referenced_works":["https://openalex.org/W15988985","https://openalex.org/W23901004","https://openalex.org/W41829100","https://openalex.org/W70066085","https://openalex.org/W89351676","https://openalex.org/W95851278","https://openalex.org/W196145869","https://openalex.org/W242743621","https://openalex.org/W1487381889","https://openalex.org/W1512404644","https://openalex.org/W1549518189","https://openalex.org/W1568079082","https://openalex.org/W1573988226","https://openalex.org/W1590194639","https://openalex.org/W1652425438","https://openalex.org/W1687157824","https://openalex.org/W1768041074","https://openalex.org/W1808652302","https://openalex.org/W1979900513","https://openalex.org/W1994073113","https://openalex.org/W2005787113","https://openalex.org/W2006776184","https://openalex.org/W2008998978","https://openalex.org/W2017293244","https://openalex.org/W2018316137","https://openalex.org/W2022265561","https://openalex.org/W2025143098","https://openalex.org/W2042795752","https://openalex.org/W2047152335","https://openalex.org/W2056542068","https://openalex.org/W2064310756","https://openalex.org/W2064337796","https://openalex.org/W2065391044","https://openalex.org/W2070469020","https://openalex.org/W2073664094","https://openalex.org/W2084449331","https://openalex.org/W2091372246","https://openalex.org/W2093274439","https://openalex.org/W2097601626","https://openalex.org/W2103193738","https://openalex.org/W2104608657","https://openalex.org/W2110261093","https://openalex.org/W2120411377","https://openalex.org/W2120986959","https://openalex.org/W2121382432","https://openalex.org/W2123711355","https://openalex.org/W2123712309","https://openalex.org/W2124972954","https://openalex.org/W2128412547","https://openalex.org/W2130171204","https://openalex.org/W2131668595","https://openalex.org/W2134137336","https://openalex.org/W2134783591","https://openalex.org/W2160845850","https://openalex.org/W2162115225","https://openalex.org/W2166215401","https://openalex.org/W2167166052","https://openalex.org/W2170694986","https://openalex.org/W2171284825","https://openalex.org/W2171766700","https://openalex.org/W2262089314","https://openalex.org/W2266481528","https://openalex.org/W2320578418","https://openalex.org/W2329661513","https://openalex.org/W2573183043","https://openalex.org/W6600633878","https://openalex.org/W6600950631","https://openalex.org/W6601682116","https://openalex.org/W6602886879","https://openalex.org/W6603658485","https://openalex.org/W6603839991","https://openalex.org/W6607939100","https://openalex.org/W6609269508","https://openalex.org/W6629211986","https://openalex.org/W6630546887","https://openalex.org/W6635305044","https://openalex.org/W6637064052","https://openalex.org/W6638307375","https://openalex.org/W6674794431","https://openalex.org/W6675631986","https://openalex.org/W6677849330","https://openalex.org/W6678220625","https://openalex.org/W6678452364","https://openalex.org/W6678607952","https://openalex.org/W6678626697","https://openalex.org/W6678980667","https://openalex.org/W6685279398","https://openalex.org/W6692625439","https://openalex.org/W6693357331","https://openalex.org/W6701669391"],"related_works":["https://openalex.org/W187932805","https://openalex.org/W1641026212","https://openalex.org/W4312053962","https://openalex.org/W2078646730","https://openalex.org/W2087134418","https://openalex.org/W2323588885","https://openalex.org/W3047677938","https://openalex.org/W2920854314","https://openalex.org/W4302340031","https://openalex.org/W2398973086"],"abstract_inverted_index":{"OBJECTIVE:":[0],"To":[1],"review":[2],"and":[3,19,46,48,59,68,81,91,125,132,150,154,193],"evaluate":[4],"available":[5],"software":[6,126],"tools":[7,30,56,76,88,99,109,156,170,195,209],"for":[8,21,161,176,199,244],"electronic":[9,217],"health":[10,218],"record-driven":[11],"phenotype":[12,28,86,207],"authoring":[13,29,87,177,208],"in":[14,37,115,118,139,147,227],"order":[15],"to":[16,70,77,182,214],"identify":[17],"gaps":[18,224],"needs":[20],"future":[22,246],"development.":[23],"MATERIALS":[24],"AND":[25],"METHODS:":[26],"Candidate":[27],"were":[31,89,166,171],"identified":[32,90,98,138],"through":[33],"(1)":[34],"literature":[35],"search":[36,128],"four":[38],"publication":[39],"databases":[40],"(PubMed,":[41],"Embase,":[42],"Web":[43],"of":[44,55,73,94,96,229,232,248],"Science,":[45],"Scopus)":[47],"(2)":[49],"a":[50,158,241],"web":[51,159],"search.":[52],"A":[53,64],"collection":[54],"was":[57,66,189],"compiled":[58],"reviewed":[60,75],"after":[61],"the":[62,71,74,101,140,180,230,245],"searches.":[63],"survey":[65,103],"designed":[67],"distributed":[69],"developers":[72],"discover":[78],"their":[79,116],"functionalities":[80,231],"features.":[82],"RESULTS:":[83],"Twenty-four":[84],"different":[85],"reviewed.":[92],"Developers":[93],"16":[95],"these":[97],"completed":[100],"evaluation":[102,141],"(67%":[104],"response":[105],"rate).":[106],"The":[107,235],"surveyed":[108],"showed":[110],"commonalities":[111],"but":[112,223],"also":[113,167],"varied":[114],"capabilities":[117],"algorithm":[119],"representation,":[120],"logic":[121,174],"functions,":[122,129],"data":[123,133,188,220],"support":[124,198],"extensibility,":[127],"user":[130],"interface,":[131],"outputs.":[134],"DISCUSSION:":[135],"Positive":[136],"trends":[137],"included:":[142],"algorithms":[143],"can":[144,238],"be":[145],"represented":[146],"both":[148],"computable":[149],"human":[151],"readable":[152],"formats;":[153],"most":[155],"offer":[157],"interface":[160],"easy":[162],"access.":[163],"However,":[164],"issues":[165],"identified:":[168],"many":[169,194],"lacking":[172],"advanced":[173],"functions":[175],"complex":[178],"algorithms;":[179],"ability":[181],"construct":[183],"queries":[184],"that":[185],"leveraged":[186],"un-structured":[187],"not":[190],"widely":[191],"implemented;":[192],"had":[196],"limited":[197],"plug-ins":[200],"or":[201],"external":[202],"analytic":[203],"software.":[204],"CONCLUSIONS:":[205],"Existing":[206],"could":[210],"enable":[211],"clinical":[212],"researchers":[213],"work":[215,237],"with":[216],"record":[219],"more":[221],"efficiently,":[222],"still":[225],"exist":[226],"terms":[228],"such":[233],"tools.":[234,250],"present":[236],"serve":[239],"as":[240],"reference":[242],"point":[243],"development":[247],"similar":[249]},"counts_by_year":[{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":8},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":6},{"year":2018,"cited_by_count":5},{"year":2017,"cited_by_count":6},{"year":2016,"cited_by_count":4}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
