{"id":"https://openalex.org/W1957272438","doi":"https://doi.org/10.1093/jamia/ocv048","title":"The center for expanded data annotation and retrieval","display_name":"The center for expanded data annotation and retrieval","publication_year":2015,"publication_date":"2015-06-25","ids":{"openalex":"https://openalex.org/W1957272438","doi":"https://doi.org/10.1093/jamia/ocv048","mag":"1957272438","pmid":"https://pubmed.ncbi.nlm.nih.gov/26112029"},"language":"en","primary_location":{"id":"doi:10.1093/jamia/ocv048","is_oa":true,"landing_page_url":"https://doi.org/10.1093/jamia/ocv048","pdf_url":"https://academic.oup.com/jamia/article-pdf/22/6/1148/6956955/ocv048.pdf","source":{"id":"https://openalex.org/S129839026","display_name":"Journal of the American Medical Informatics Association","issn_l":"1067-5027","issn":["1067-5027","1527-974X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","datacite","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/jamia/article-pdf/22/6/1148/6956955/ocv048.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5009128820","display_name":"Mark A. Musen","orcid":"https://orcid.org/0000-0003-3325-793X"},"institutions":[{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Mark A Musen","raw_affiliation_strings":["Stanford Center for Biomedical Informatics Research, Stanford University, Stanford, CA USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Stanford Center for Biomedical Informatics Research, Stanford University, Stanford, CA USA","institution_ids":["https://openalex.org/I97018004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027902703","display_name":"Carol A. Bean","orcid":"https://orcid.org/0000-0001-6546-826X"},"institutions":[{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Carol A Bean","raw_affiliation_strings":["Stanford Center for Biomedical Informatics Research, Stanford University, Stanford, CA USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Stanford Center for Biomedical Informatics Research, Stanford University, Stanford, CA USA","institution_ids":["https://openalex.org/I97018004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110209950","display_name":"Kei\u2010Hoi Cheung","orcid":null},"institutions":[{"id":"https://openalex.org/I32971472","display_name":"Yale University","ror":"https://ror.org/03v76x132","country_code":"US","type":"education","lineage":["https://openalex.org/I32971472"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kei-Hoi Cheung","raw_affiliation_strings":["Interdepartmental Program in Computational Biology and Bioinformatics, Department of Emergency Medicine, Yale University School of Medicine, New Haven, CT USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Interdepartmental Program in Computational Biology and Bioinformatics, Department of Emergency Medicine, Yale University School of Medicine, New Haven, CT USA","institution_ids":["https://openalex.org/I32971472"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044836472","display_name":"Michel Dumontier","orcid":"https://orcid.org/0000-0003-4727-9435"},"institutions":[{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Michel Dumontier","raw_affiliation_strings":["Stanford Center for Biomedical Informatics Research, Stanford University, Stanford, CA USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Stanford Center for Biomedical Informatics Research, Stanford University, Stanford, CA USA","institution_ids":["https://openalex.org/I97018004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024970558","display_name":"Kimberly Durante","orcid":"https://orcid.org/0000-0001-9052-2854"},"institutions":[{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kim A Durante","raw_affiliation_strings":["Stanford University Libraries, Stanford University, Stanford, CA USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Stanford University Libraries, Stanford University, Stanford, CA USA","institution_ids":["https://openalex.org/I97018004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5078274543","display_name":"Olivier Gevaert","orcid":"https://orcid.org/0000-0002-9965-5466"},"institutions":[{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Olivier Gevaert","raw_affiliation_strings":["Stanford Center for Biomedical Informatics Research, Stanford University, Stanford, CA USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Stanford Center for Biomedical Informatics Research, Stanford University, Stanford, CA USA","institution_ids":["https://openalex.org/I97018004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086246448","display_name":"Alejandra Gonz\u00e1lez-Beltr\u00e1n","orcid":"https://orcid.org/0000-0003-3499-8262"},"institutions":[{"id":"https://openalex.org/I40120149","display_name":"University of Oxford","ror":"https://ror.org/052gg0110","country_code":"GB","type":"education","lineage":["https://openalex.org/I40120149"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Alejandra Gonzalez-Beltran","raw_affiliation_strings":["Oxford e-Research Centre, University of Oxford, Oxford, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Oxford e-Research Centre, University of Oxford, Oxford, UK","institution_ids":["https://openalex.org/I40120149"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083763463","display_name":"Purvesh Khatri","orcid":"https://orcid.org/0000-0002-4143-4708"},"institutions":[{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Purvesh Khatri","raw_affiliation_strings":["Stanford Center for Biomedical Informatics Research, Stanford University, Stanford, CA USA","Stanford Institute for Immunity, Transplantation, and Infection, Stanford, CA USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Stanford Center for Biomedical Informatics Research, Stanford University, Stanford, CA USA","institution_ids":["https://openalex.org/I97018004"]},{"raw_affiliation_string":"Stanford Institute for Immunity, Transplantation, and Infection, Stanford, CA USA","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066562919","display_name":"Steven H. Kleinstein","orcid":"https://orcid.org/0000-0003-4957-1544"},"institutions":[{"id":"https://openalex.org/I32971472","display_name":"Yale University","ror":"https://ror.org/03v76x132","country_code":"US","type":"education","lineage":["https://openalex.org/I32971472"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Steven H Kleinstein","raw_affiliation_strings":["Interdepartmental Program in Computational Biology and Bioinformatics, Departments of Pathology and Immunobiology, Yale University School of Medicine, New Haven, CT USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Interdepartmental Program in Computational Biology and Bioinformatics, Departments of Pathology and Immunobiology, Yale University School of Medicine, New Haven, CT USA","institution_ids":["https://openalex.org/I32971472"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5018993179","display_name":"Martin J. O\u2019Connor","orcid":"https://orcid.org/0000-0002-2256-2421"},"institutions":[{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Martin J O\u2019Connor","raw_affiliation_strings":["Stanford Center for Biomedical Informatics Research, Stanford University, Stanford, CA USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Stanford Center for Biomedical Informatics Research, Stanford University, Stanford, CA USA","institution_ids":["https://openalex.org/I97018004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020288433","display_name":"Yannick Pouliot","orcid":"https://orcid.org/0000-0002-0344-1923"},"institutions":[{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yannick Pouliot","raw_affiliation_strings":["Stanford Center for Biomedical Informatics Research, Stanford University, Stanford, CA USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Stanford Center for Biomedical Informatics Research, Stanford University, Stanford, CA USA","institution_ids":["https://openalex.org/I97018004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5018395535","display_name":"Philippe Rocca\u2010Serra","orcid":"https://orcid.org/0000-0001-9853-5668"},"institutions":[{"id":"https://openalex.org/I40120149","display_name":"University of Oxford","ror":"https://ror.org/052gg0110","country_code":"GB","type":"education","lineage":["https://openalex.org/I40120149"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Philippe Rocca-Serra","raw_affiliation_strings":["Oxford e-Research Centre, University of Oxford, Oxford, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Oxford e-Research Centre, University of Oxford, Oxford, UK","institution_ids":["https://openalex.org/I40120149"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008806860","display_name":"Susanna\u2010Assunta Sansone","orcid":"https://orcid.org/0000-0001-5306-5690"},"institutions":[{"id":"https://openalex.org/I40120149","display_name":"University of Oxford","ror":"https://ror.org/052gg0110","country_code":"GB","type":"education","lineage":["https://openalex.org/I40120149"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Susanna-Assunta Sansone","raw_affiliation_strings":["Oxford e-Research Centre, University of Oxford, Oxford, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Oxford e-Research Centre, University of Oxford, Oxford, UK","institution_ids":["https://openalex.org/I40120149"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066051074","display_name":"Jeffrey A. Wiser","orcid":null},"institutions":[{"id":"https://openalex.org/I2948394018","display_name":"Northrop Grumman (United States)","ror":"https://ror.org/05kewds18","country_code":"US","type":"company","lineage":["https://openalex.org/I2948394018"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jeffrey A Wiser","raw_affiliation_strings":["Northrop Grumman Corporation, West Falls Church, VA USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Northrop Grumman Corporation, West Falls Church, VA USA","institution_ids":["https://openalex.org/I2948394018"]}]},{"author_position":"last","author":{"id":null,"display_name":"and the CEDAR team","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"and the CEDAR team","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":3967,"currency":"USD","value_usd":3967},"apc_paid":null,"fwci":6.7986,"has_fulltext":true,"cited_by_count":118,"citation_normalized_percentile":{"value":0.97547264,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":100},"biblio":{"volume":"22","issue":"6","first_page":"1148","last_page":"1152"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9943000078201294,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9943000078201294,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11937","display_name":"Research Data Management Practices","score":0.9891999959945679,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.9710000157356262,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/metadata","display_name":"Metadata","score":0.9457259774208069},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.815102219581604},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.769597053527832},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.6146802306175232},{"id":"https://openalex.org/keywords/data-management-plan","display_name":"Data management plan","score":0.5535738468170166},{"id":"https://openalex.org/keywords/data-curation","display_name":"Data curation","score":0.5400993824005127},{"id":"https://openalex.org/keywords/metadata-repository","display_name":"Metadata repository","score":0.5152173638343811},{"id":"https://openalex.org/keywords/reuse","display_name":"Reuse","score":0.5047682523727417},{"id":"https://openalex.org/keywords/data-element","display_name":"Data element","score":0.48424145579338074},{"id":"https://openalex.org/keywords/template","display_name":"Template","score":0.4684717059135437},{"id":"https://openalex.org/keywords/meta-data-services","display_name":"Meta Data Services","score":0.4561464488506317},{"id":"https://openalex.org/keywords/information-repository","display_name":"Information repository","score":0.4504467248916626},{"id":"https://openalex.org/keywords/data-dictionary","display_name":"Data dictionary","score":0.4453161060810089},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.38182199001312256},{"id":"https://openalex.org/keywords/data-management","display_name":"Data management","score":0.3815973699092865},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.37219005823135376},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.23592329025268555},{"id":"https://openalex.org/keywords/computer-data-storage","display_name":"Computer data storage","score":0.11464539170265198},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.09925669431686401}],"concepts":[{"id":"https://openalex.org/C93518851","wikidata":"https://www.wikidata.org/wiki/Q180160","display_name":"Metadata","level":2,"score":0.9457259774208069},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.815102219581604},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.769597053527832},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.6146802306175232},{"id":"https://openalex.org/C158746014","wikidata":"https://www.wikidata.org/wiki/Q17085509","display_name":"Data management plan","level":3,"score":0.5535738468170166},{"id":"https://openalex.org/C91632574","wikidata":"https://www.wikidata.org/wiki/Q15088675","display_name":"Data curation","level":2,"score":0.5400993824005127},{"id":"https://openalex.org/C153048206","wikidata":"https://www.wikidata.org/wiki/Q3454922","display_name":"Metadata repository","level":3,"score":0.5152173638343811},{"id":"https://openalex.org/C206588197","wikidata":"https://www.wikidata.org/wiki/Q846574","display_name":"Reuse","level":2,"score":0.5047682523727417},{"id":"https://openalex.org/C30872290","wikidata":"https://www.wikidata.org/wiki/Q1172389","display_name":"Data element","level":3,"score":0.48424145579338074},{"id":"https://openalex.org/C82714645","wikidata":"https://www.wikidata.org/wiki/Q438331","display_name":"Template","level":2,"score":0.4684717059135437},{"id":"https://openalex.org/C136976847","wikidata":"https://www.wikidata.org/wiki/Q6822297","display_name":"Meta Data Services","level":4,"score":0.4561464488506317},{"id":"https://openalex.org/C3102742","wikidata":"https://www.wikidata.org/wiki/Q6031177","display_name":"Information repository","level":3,"score":0.4504467248916626},{"id":"https://openalex.org/C98143201","wikidata":"https://www.wikidata.org/wiki/Q1147639","display_name":"Data dictionary","level":3,"score":0.4453161060810089},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.38182199001312256},{"id":"https://openalex.org/C1668388","wikidata":"https://www.wikidata.org/wiki/Q1149776","display_name":"Data management","level":2,"score":0.3815973699092865},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.37219005823135376},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.23592329025268555},{"id":"https://openalex.org/C194739806","wikidata":"https://www.wikidata.org/wiki/Q66221","display_name":"Computer data storage","level":2,"score":0.11464539170265198},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.09925669431686401},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014481","descriptor_name":"United States","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014481","descriptor_name":"United States","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014481","descriptor_name":"United States","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014481","descriptor_name":"United States","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014481","descriptor_name":"United States","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D035843","descriptor_name":"Biomedical Research","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D035843","descriptor_name":"Biomedical Research","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D035843","descriptor_name":"Biomedical Research","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D035843","descriptor_name":"Biomedical Research","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D035843","descriptor_name":"Biomedical Research","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D066264","descriptor_name":"Datasets as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D066264","descriptor_name":"Datasets as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D066264","descriptor_name":"Datasets as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D066264","descriptor_name":"Datasets as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D066264","descriptor_name":"Datasets as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":6,"locations":[{"id":"doi:10.1093/jamia/ocv048","is_oa":true,"landing_page_url":"https://doi.org/10.1093/jamia/ocv048","pdf_url":"https://academic.oup.com/jamia/article-pdf/22/6/1148/6956955/ocv048.pdf","source":{"id":"https://openalex.org/S129839026","display_name":"Journal of the American Medical Informatics Association","issn_l":"1067-5027","issn":["1067-5027","1527-974X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association","raw_type":"journal-article"},{"id":"pmid:26112029","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/26112029","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association : JAMIA","raw_type":null},{"id":"pmh:oai:cris.maastrichtuniversity.nl:openaire/abf7ad9c-dbb7-4c49-aeb0-888f598a4301","is_oa":true,"landing_page_url":"https://cris.maastrichtuniversity.nl/en/publications/abf7ad9c-dbb7-4c49-aeb0-888f598a4301","pdf_url":null,"source":{"id":"https://openalex.org/S4306402616","display_name":"Research Publications (Maastricht University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I34352273","host_organization_name":"Maastricht University","host_organization_lineage":["https://openalex.org/I34352273"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Musen, M A, Bean, C A, Cheung, K-H, Dumontier, M, Durante, K A, Gevaert, O, Gonzalez-Beltran, A, Khatri, P, Kleinstein, S H, O'Connor, M J, Pouliot, Y, Rocca-Serra, P, Sansone, S-A & Wiser, J A 2015, 'The center for expanded data annotation and retrieval', Journal of the American Medical Informatics Association, vol. 22, no. 6, pp. 1148-1152. https://doi.org/10.1093/jamia/ocv048","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:ora.ox.ac.uk:uuid:6e7ecbd9-8bb8-4113-a2f5-cd610f6ce511","is_oa":false,"landing_page_url":"https://ora.ox.ac.uk/objects/uuid:6e7ecbd9-8bb8-4113-a2f5-cd610f6ce511","pdf_url":null,"source":{"id":"https://openalex.org/S4306402636","display_name":"Oxford University Research Archive (ORA) (University of Oxford)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I40120149","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/I40120149"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Symplectic Elements at Oxford","raw_type":"Journal article"},{"id":"pmh:oai:pubmedcentral.nih.gov:5009916","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5009916","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Am Med Inform Assoc","raw_type":"Text"},{"id":"doi:10.25504/fairsharing.v527h4","is_oa":true,"landing_page_url":"https://doi.org/10.25504/fairsharing.v527h4","pdf_url":null,"source":{"id":"https://openalex.org/S7407053452","display_name":"FAIRsharing.org","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"Dataset"}],"best_oa_location":{"id":"doi:10.1093/jamia/ocv048","is_oa":true,"landing_page_url":"https://doi.org/10.1093/jamia/ocv048","pdf_url":"https://academic.oup.com/jamia/article-pdf/22/6/1148/6956955/ocv048.pdf","source":{"id":"https://openalex.org/S129839026","display_name":"Journal of the American Medical Informatics Association","issn_l":"1067-5027","issn":["1067-5027","1527-974X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.46000000834465027,"display_name":"Partnerships for the goals","id":"https://metadata.un.org/sdg/17"}],"awards":[{"id":"https://openalex.org/G203390434","display_name":"Omics Data Standards: synergy and implementations","funder_award_id":"BB/E025080/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G3339699563","display_name":null,"funder_award_id":"BB/J020265/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G3379066889","display_name":"Establishing common standards and curation practices: towards real world biosharing.","funder_award_id":"BB/J020265/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G412979241","display_name":null,"funder_award_id":"BB/I000771/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G5456076942","display_name":"'Omics Data Sharing: the Investigation / Study / Assay (ISA) Infrastructure","funder_award_id":"BB/I000771/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G6346874051","display_name":"COpenPlantOmics (COPO): a Collaborative Bioinformatics Plant Science Platform","funder_award_id":"BB/L024101/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G651559499","display_name":null,"funder_award_id":"BB/I025840/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G6727031172","display_name":"Building a global metagenomics portal ('MGportal') to handle next-generation sequencing data and associated metadata","funder_award_id":"BB/I025840/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G6873799469","display_name":null,"funder_award_id":"U54 AI117925","funder_id":"https://openalex.org/F4320337355","funder_display_name":"National Institute of Allergy and Infectious Diseases"},{"id":"https://openalex.org/G7302151197","display_name":null,"funder_award_id":"BB/L024101/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G7775520706","display_name":null,"funder_award_id":"BB/E025080/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"}],"funders":[{"id":"https://openalex.org/F4320334629","display_name":"Biotechnology and Biological Sciences Research Council","ror":"https://ror.org/00cwqg982"},{"id":"https://openalex.org/F4320337355","display_name":"National Institute of Allergy and Infectious Diseases","ror":"https://ror.org/043z4tv69"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W1957272438.pdf","grobid_xml":"https://content.openalex.org/works/W1957272438.grobid-xml"},"referenced_works_count":24,"referenced_works":["https://openalex.org/W954037205","https://openalex.org/W1544923801","https://openalex.org/W1582892253","https://openalex.org/W1952553890","https://openalex.org/W1957272438","https://openalex.org/W1968528175","https://openalex.org/W1978074971","https://openalex.org/W1990386528","https://openalex.org/W2025738474","https://openalex.org/W2047712922","https://openalex.org/W2091636366","https://openalex.org/W2104990432","https://openalex.org/W2114224807","https://openalex.org/W2123152121","https://openalex.org/W2124901389","https://openalex.org/W2130430745","https://openalex.org/W2132609595","https://openalex.org/W2141297584","https://openalex.org/W2155354890","https://openalex.org/W3125261728","https://openalex.org/W4254615302","https://openalex.org/W6640836464","https://openalex.org/W6675935202","https://openalex.org/W6680033311"],"related_works":["https://openalex.org/W3204280384","https://openalex.org/W2106126997","https://openalex.org/W2555822790","https://openalex.org/W2349281696","https://openalex.org/W2477591003","https://openalex.org/W2358476326","https://openalex.org/W2325085362","https://openalex.org/W769818350","https://openalex.org/W2907247951","https://openalex.org/W4386544240"],"abstract_inverted_index":{"The":[0,90],"Center":[1],"for":[2,17,37],"Expanded":[3],"Data":[4],"Annotation":[5],"and":[6,14,26,44,58,117,134,145,156],"Retrieval":[7],"is":[8],"studying":[9],"the":[10,47,111,129,135,138,151],"creation":[11],"of":[12,32,41,49,69,122,137,153],"comprehensive":[13],"expressive":[15],"metadata":[16,70,77,88,91,154],"biomedical":[18,42],"datasets":[19,101],"to":[20,52,55,59,75,110,150,161],"facilitate":[21],"data":[22,24,27,83,140],"discovery,":[23],"interpretation,":[25],"reuse.":[28],"We":[29,64],"take":[30],"advantage":[31],"emerging":[33],"community-based":[34],"standard":[35],"templates":[36,57],"describing":[38],"different":[39],"kinds":[40],"datasets,":[43],"we":[45,73,142],"investigate":[46],"use":[48],"computational":[50],"techniques":[51],"help":[53],"investigators":[54],"assemble":[56],"fill":[60],"in":[61,87],"their":[62],"values.":[63],"are":[65,102,143],"creating":[66],"a":[67],"repository":[68,92],"from":[71],"which":[72],"plan":[74],"identify":[76],"patterns":[78],"that":[79,158],"will":[80,95,107,159],"drive":[81],"predictive":[82],"entry":[84],"when":[85,99],"filling":[86],"templates.":[89],"not":[93],"only":[94],"capture":[96],"annotations":[97],"specified":[98],"experimental":[100,123],"initially":[103,127],"created,":[104],"but":[105],"also":[106],"incorporate":[108],"links":[109],"published":[112],"literature,":[113],"including":[114],"secondary":[115],"analyses":[116],"possible":[118],"refinements":[119],"or":[120],"retractions":[121],"interpretations.":[124],"By":[125],"working":[126],"with":[128],"Human":[130],"Immunology":[131],"Project":[132],"Consortium":[133],"developers":[136],"ImmPort":[139],"repository,":[141],"developing":[144],"evaluating":[146],"an":[147],"end-to-end":[148],"solution":[149],"problems":[152],"authoring":[155],"management":[157],"generalize":[160],"other":[162],"data-management":[163],"environments.":[164]},"counts_by_year":[{"year":2026,"cited_by_count":4},{"year":2025,"cited_by_count":12},{"year":2024,"cited_by_count":12},{"year":2023,"cited_by_count":8},{"year":2022,"cited_by_count":12},{"year":2021,"cited_by_count":8},{"year":2020,"cited_by_count":5},{"year":2019,"cited_by_count":11},{"year":2018,"cited_by_count":12},{"year":2017,"cited_by_count":21},{"year":2016,"cited_by_count":11},{"year":2015,"cited_by_count":2}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2016-06-24T00:00:00"}
