{"id":"https://openalex.org/W2108371713","doi":"https://doi.org/10.1093/jamia/ocu027","title":"Transformation of standardized clinical models based on OWL technologies: from CEM to OpenEHR archetypes","display_name":"Transformation of standardized clinical models based on OWL technologies: from CEM to OpenEHR archetypes","publication_year":2015,"publication_date":"2015-02-10","ids":{"openalex":"https://openalex.org/W2108371713","doi":"https://doi.org/10.1093/jamia/ocu027","mag":"2108371713"},"language":"en","primary_location":{"id":"doi:10.1093/jamia/ocu027","is_oa":true,"landing_page_url":"https://doi.org/10.1093/jamia/ocu027","pdf_url":"https://academic.oup.com/jamia/article-pdf/22/3/536/34145727/ocu027.pdf","source":{"id":"https://openalex.org/S129839026","display_name":"Journal of the American Medical Informatics Association","issn_l":"1067-5027","issn":["1067-5027","1527-974X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/jamia/article-pdf/22/3/536/34145727/ocu027.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":null,"display_name":"Mar\u00eda del Carmen Legaz-Garc\u00eda","orcid":null},"institutions":[{"id":"https://openalex.org/I80180929","display_name":"Universidad de Murcia","ror":"https://ror.org/03p3aeb86","country_code":"ES","type":"education","lineage":["https://openalex.org/I80180929"]}],"countries":["ES"],"is_corresponding":true,"raw_author_name":"Mar\u00eda del Carmen Legaz-Garc\u00eda","raw_affiliation_strings":["Departamento de Inform\u00e1tica y Sistemas, Universidad de Murcia, IMIB-Arrixaca, 30100 Spain"],"affiliations":[{"raw_affiliation_string":"Departamento de Inform\u00e1tica y Sistemas, Universidad de Murcia, IMIB-Arrixaca, 30100 Spain","institution_ids":["https://openalex.org/I80180929"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042156730","display_name":"Marcos Men\u00e1rguez-Tortosa","orcid":"https://orcid.org/0000-0003-1668-1798"},"institutions":[{"id":"https://openalex.org/I80180929","display_name":"Universidad de Murcia","ror":"https://ror.org/03p3aeb86","country_code":"ES","type":"education","lineage":["https://openalex.org/I80180929"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Marcos Men\u00e1rguez-Tortosa","raw_affiliation_strings":["Departamento de Inform\u00e1tica y Sistemas, Universidad de Murcia, IMIB-Arrixaca, 30100 Spain"],"affiliations":[{"raw_affiliation_string":"Departamento de Inform\u00e1tica y Sistemas, Universidad de Murcia, IMIB-Arrixaca, 30100 Spain","institution_ids":["https://openalex.org/I80180929"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086790858","display_name":"Jesualdo Tom\u00e1s Fern\u00e1ndez\u2010Breis","orcid":"https://orcid.org/0000-0002-7558-2880"},"institutions":[{"id":"https://openalex.org/I80180929","display_name":"Universidad de Murcia","ror":"https://ror.org/03p3aeb86","country_code":"ES","type":"education","lineage":["https://openalex.org/I80180929"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Jesualdo Tom\u00e1s Fern\u00e1ndez-Breis","raw_affiliation_strings":["Departamento de Inform\u00e1tica y Sistemas, Universidad de Murcia, IMIB-Arrixaca, 30100 Spain"],"affiliations":[{"raw_affiliation_string":"Departamento de Inform\u00e1tica y Sistemas, Universidad de Murcia, IMIB-Arrixaca, 30100 Spain","institution_ids":["https://openalex.org/I80180929"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060390916","display_name":"Christopher G. Chute","orcid":"https://orcid.org/0000-0001-5437-2545"},"institutions":[{"id":"https://openalex.org/I4210146710","display_name":"Mayo Clinic in Florida","ror":"https://ror.org/03zzw1w08","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1330342723","https://openalex.org/I4210146710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Christopher G Chute","raw_affiliation_strings":["Department of Health Sciences Research, Mayo Clinic, Rochester, MN, USA"],"affiliations":[{"raw_affiliation_string":"Department of Health Sciences Research, Mayo Clinic, Rochester, MN, USA","institution_ids":["https://openalex.org/I4210146710"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5076058129","display_name":"Cui Tao","orcid":"https://orcid.org/0000-0002-4267-1924"},"institutions":[{"id":"https://openalex.org/I919571938","display_name":"The University of Texas Health Science Center at Houston","ror":"https://ror.org/03gds6c39","country_code":"US","type":"education","lineage":["https://openalex.org/I919571938"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Cui Tao","raw_affiliation_strings":["School of Biomedical Informatics, University of Texas Health Science Center at Houston, Houston, TX, USA"],"affiliations":[{"raw_affiliation_string":"School of Biomedical Informatics, University of Texas Health Science Center at Houston, Houston, TX, USA","institution_ids":["https://openalex.org/I919571938"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I80180929"],"apc_list":{"value":3967,"currency":"USD","value_usd":3967},"apc_paid":null,"fwci":2.1129,"has_fulltext":false,"cited_by_count":24,"citation_normalized_percentile":{"value":0.87296639,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"22","issue":"3","first_page":"536","last_page":"544"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9783999919891357,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9783999919891357,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9775000214576721,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T14330","display_name":"Library Science and Information Systems","score":0.9768000245094299,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5916185975074768},{"id":"https://openalex.org/keywords/transformation","display_name":"Transformation (genetics)","score":0.5912755131721497},{"id":"https://openalex.org/keywords/archetype","display_name":"Archetype","score":0.5685049295425415},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.3532832860946655},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3229460120201111},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.0531182587146759}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5916185975074768},{"id":"https://openalex.org/C204241405","wikidata":"https://www.wikidata.org/wiki/Q461499","display_name":"Transformation (genetics)","level":3,"score":0.5912755131721497},{"id":"https://openalex.org/C49848784","wikidata":"https://www.wikidata.org/wiki/Q131714","display_name":"Archetype","level":2,"score":0.5685049295425415},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3532832860946655},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3229460120201111},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0531182587146759},{"id":"https://openalex.org/C124952713","wikidata":"https://www.wikidata.org/wiki/Q8242","display_name":"Literature","level":1,"score":0.0},{"id":"https://openalex.org/C142362112","wikidata":"https://www.wikidata.org/wiki/Q735","display_name":"Art","level":0,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1093/jamia/ocu027","is_oa":true,"landing_page_url":"https://doi.org/10.1093/jamia/ocu027","pdf_url":"https://academic.oup.com/jamia/article-pdf/22/3/536/34145727/ocu027.pdf","source":{"id":"https://openalex.org/S129839026","display_name":"Journal of the American Medical Informatics Association","issn_l":"1067-5027","issn":["1067-5027","1527-974X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association","raw_type":"journal-article"},{"id":"mag:25670753","is_oa":false,"landing_page_url":"https://eric.ed.gov/?id=EJ367522","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association : JAMIA","raw_type":null},{"id":"pmh:oai:europepmc.org:4609872","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5566199","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/jamia/ocu027","is_oa":true,"landing_page_url":"https://doi.org/10.1093/jamia/ocu027","pdf_url":"https://academic.oup.com/jamia/article-pdf/22/3/536/34145727/ocu027.pdf","source":{"id":"https://openalex.org/S129839026","display_name":"Journal of the American Medical Informatics Association","issn_l":"1067-5027","issn":["1067-5027","1527-974X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/17","score":0.5,"display_name":"Partnerships for the goals"}],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2108371713.pdf","grobid_xml":"https://content.openalex.org/works/W2108371713.grobid-xml"},"referenced_works_count":23,"referenced_works":["https://openalex.org/W106011065","https://openalex.org/W128307419","https://openalex.org/W166276185","https://openalex.org/W224398829","https://openalex.org/W1489408144","https://openalex.org/W1529522905","https://openalex.org/W1991798042","https://openalex.org/W2035559851","https://openalex.org/W2038152972","https://openalex.org/W2040593676","https://openalex.org/W2107643858","https://openalex.org/W2119847412","https://openalex.org/W2134273606","https://openalex.org/W2137428218","https://openalex.org/W2142789360","https://openalex.org/W2155659776","https://openalex.org/W2156814277","https://openalex.org/W2166215401","https://openalex.org/W2228683643","https://openalex.org/W2237564809","https://openalex.org/W2501765443","https://openalex.org/W2611894836","https://openalex.org/W3147477526"],"related_works":["https://openalex.org/W2748952813","https://openalex.org/W3042248303","https://openalex.org/W2971731373","https://openalex.org/W2946570158","https://openalex.org/W2367903128","https://openalex.org/W2372449700","https://openalex.org/W2529014963","https://openalex.org/W2366000998","https://openalex.org/W2912650197","https://openalex.org/W3136706476"],"abstract_inverted_index":{"Abstract":[0],"Introduction":[1],"The":[2,40,100,135],"semantic":[3,37,243],"interoperability":[4,38,244],"of":[5,25,42,58,67,86,144,158,172,182,220,242,245],"electronic":[6],"healthcare":[7],"records":[8],"(EHRs)":[9],"systems":[10],"is":[11,45,62,103],"a":[12,48,114,151,170,176,180],"major":[13],"challenge":[14],"in":[15,36,94,116,200,239],"the":[16,23,55,65,80,83,87,95,139,156,163,187,218,225,240],"medical":[17],"informatics":[18],"area.":[19],"International":[20],"initiatives":[21],"pursue":[22],"use":[24],"semantically":[26],"interoperable":[27],"clinical":[28,59,159,213],"models,":[29,60,160],"and":[30,129,141,179],"ontologies":[31],"have":[32,149,192],"frequently":[33],"been":[34,193],"used":[35],"efforts.":[39],"objective":[41],"this":[43],"paper":[44],"to":[46,168,195,211],"propose":[47,113],"generic,":[49,152],"ontology-based,":[50],"flexible":[51,153],"approach":[52,102,154,206,232],"for":[53,64,155,162,223,236],"supporting":[54,224],"automatic":[56],"transformation":[57,66,77,101,127,136,157,165,174,205,226],"which":[61,117],"illustrated":[63],"Clinical":[68],"Element":[69],"Models":[70],"(CEMs)":[71],"into":[72,123,198],"openEHR":[73,124,183],"archetypes.":[74],"Methods":[75],"Our":[76],"method":[78],"exploits":[79,138],"fact":[81],"that":[82,185,207,230],"information":[84],"models":[85],"most":[88],"relevant":[89],"EHR":[90,246],"specifications":[91],"are":[92],"available":[93],"Web":[96],"Ontology":[97],"Language":[98],"(OWL).":[99],"based":[104],"on":[105],"defining":[106],"mappings":[107],"between":[108],"those":[109],"ontological":[110],"structures.":[111],"We":[112,148,191,216,228],"way":[115],"CEM":[118,167,197],"entities":[119],"can":[120],"be":[121,209,234],"transformed":[122],"by":[125],"using":[126],"templates":[128],"OWL":[130,145,221],"as":[131],"common":[132],"representation":[133],"formalism.":[134],"architecture":[137],"reasoning":[140],"inferencing":[142],"capabilities":[143],"technologies.":[146],"Results":[147],"devised":[150],"implemented":[161],"unidirectional":[164],"from":[166],"openEHR,":[169],"series":[171],"reusable":[173,204],"templates,":[175],"proof-of-concept":[177],"implementation,":[178],"set":[181],"archetypes":[184,199],"validate":[186],"methodological":[188],"approach.":[189],"Conclusions":[190],"able":[194],"transform":[196],"an":[201],"automatic,":[202],"flexible,":[203],"could":[208,233],"extended":[210],"other":[212],"model":[214],"specifications.":[215],"exploit":[217],"potential":[219],"technologies":[222],"process.":[227],"believe":[229],"our":[231],"useful":[235],"international":[237],"efforts":[238],"area":[241],"systems.":[247]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":5},{"year":2016,"cited_by_count":4},{"year":2015,"cited_by_count":3}],"updated_date":"2026-04-16T08:26:57.006410","created_date":"2016-06-24T00:00:00"}
