{"id":"https://openalex.org/W4415049233","doi":"https://doi.org/10.1093/jamia/ocaf113","title":"Efficient extraction of medication information from clinical notes: an evaluation in 2 languages","display_name":"Efficient extraction of medication information from clinical notes: an evaluation in 2 languages","publication_year":2025,"publication_date":"2025-10-09","ids":{"openalex":"https://openalex.org/W4415049233","doi":"https://doi.org/10.1093/jamia/ocaf113","pmid":"https://pubmed.ncbi.nlm.nih.gov/41071911"},"language":"en","primary_location":{"id":"doi:10.1093/jamia/ocaf113","is_oa":false,"landing_page_url":"https://doi.org/10.1093/jamia/ocaf113","pdf_url":null,"source":{"id":"https://openalex.org/S129839026","display_name":"Journal of the American Medical Informatics Association","issn_l":"1067-5027","issn":["1067-5027","1527-974X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://inria.hal.science/hal-05375038v1/document","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5050819948","display_name":"Thibaut Fabacher","orcid":null},"institutions":[{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I204730241","display_name":"Universit\u00e9 Paris Cit\u00e9","ror":"https://ror.org/05f82e368","country_code":"FR","type":"education","lineage":["https://openalex.org/I204730241"]},{"id":"https://openalex.org/I4210091437","display_name":"Sorbonne Paris Cit\u00e9","ror":"https://ror.org/001z21q04","country_code":"FR","type":"other","lineage":["https://openalex.org/I4210091437"]},{"id":"https://openalex.org/I4210163538","display_name":"H\u00f4pital Civil, Strasbourg","ror":"https://ror.org/05fkq4848","country_code":"FR","type":"healthcare","lineage":["https://openalex.org/I4210145324","https://openalex.org/I4210163538"]},{"id":"https://openalex.org/I68947357","display_name":"Universit\u00e9 de Strasbourg","ror":"https://ror.org/00pg6eq24","country_code":"FR","type":"education","lineage":["https://openalex.org/I68947357"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Thibaut Fabacher","raw_affiliation_strings":["IMAGeS, ICube Laboratory, Universit\u00e9 de Strasbourg, CNRS, UMR 7357 , Strasbourg, 67000,","Inria, Inserm, Universit\u00e9 Paris Cit\u00e9 , Paris, 75013,","Service de Sant\u00e9 Publique, University Hospital of Strasbourg , Strasbourg, 67000,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"IMAGeS, ICube Laboratory, Universit\u00e9 de Strasbourg, CNRS, UMR 7357 , Strasbourg, 67000,","institution_ids":["https://openalex.org/I68947357"]},{"raw_affiliation_string":"Inria, Inserm, Universit\u00e9 Paris Cit\u00e9 , Paris, 75013,","institution_ids":["https://openalex.org/I154526488","https://openalex.org/I204730241","https://openalex.org/I4210091437"]},{"raw_affiliation_string":"Service de Sant\u00e9 Publique, University Hospital of Strasbourg , Strasbourg, 67000,","institution_ids":["https://openalex.org/I68947357","https://openalex.org/I4210163538"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5035094985","display_name":"Erik Sauleau","orcid":"https://orcid.org/0000-0003-1178-1060"},"institutions":[{"id":"https://openalex.org/I4210163538","display_name":"H\u00f4pital Civil, Strasbourg","ror":"https://ror.org/05fkq4848","country_code":"FR","type":"healthcare","lineage":["https://openalex.org/I4210145324","https://openalex.org/I4210163538"]},{"id":"https://openalex.org/I68947357","display_name":"Universit\u00e9 de Strasbourg","ror":"https://ror.org/00pg6eq24","country_code":"FR","type":"education","lineage":["https://openalex.org/I68947357"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Erik-Andr\u00e9 Sauleau","raw_affiliation_strings":["IMAGeS, ICube Laboratory, Universit\u00e9 de Strasbourg, CNRS, UMR 7357 , Strasbourg, 67000,","Service de Sant\u00e9 Publique, University Hospital of Strasbourg , Strasbourg, 67000,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"IMAGeS, ICube Laboratory, Universit\u00e9 de Strasbourg, CNRS, UMR 7357 , Strasbourg, 67000,","institution_ids":["https://openalex.org/I68947357"]},{"raw_affiliation_string":"Service de Sant\u00e9 Publique, University Hospital of Strasbourg , Strasbourg, 67000,","institution_ids":["https://openalex.org/I68947357","https://openalex.org/I4210163538"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5116182597","display_name":"Emmanuelle Arcay","orcid":null},"institutions":[{"id":"https://openalex.org/I4210163538","display_name":"H\u00f4pital Civil, Strasbourg","ror":"https://ror.org/05fkq4848","country_code":"FR","type":"healthcare","lineage":["https://openalex.org/I4210145324","https://openalex.org/I4210163538"]},{"id":"https://openalex.org/I68947357","display_name":"Universit\u00e9 de Strasbourg","ror":"https://ror.org/00pg6eq24","country_code":"FR","type":"education","lineage":["https://openalex.org/I68947357"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Emmanuelle Arcay","raw_affiliation_strings":["Service de Sant\u00e9 Publique, University Hospital of Strasbourg , Strasbourg, 67000,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Service de Sant\u00e9 Publique, University Hospital of Strasbourg , Strasbourg, 67000,","institution_ids":["https://openalex.org/I68947357","https://openalex.org/I4210163538"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5097110130","display_name":"Bineta Faye","orcid":null},"institutions":[{"id":"https://openalex.org/I4210163538","display_name":"H\u00f4pital Civil, Strasbourg","ror":"https://ror.org/05fkq4848","country_code":"FR","type":"healthcare","lineage":["https://openalex.org/I4210145324","https://openalex.org/I4210163538"]},{"id":"https://openalex.org/I68947357","display_name":"Universit\u00e9 de Strasbourg","ror":"https://ror.org/00pg6eq24","country_code":"FR","type":"education","lineage":["https://openalex.org/I68947357"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Bineta Faye","raw_affiliation_strings":["Service de Sant\u00e9 Publique, University Hospital of Strasbourg , Strasbourg, 67000,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Service de Sant\u00e9 Publique, University Hospital of Strasbourg , Strasbourg, 67000,","institution_ids":["https://openalex.org/I68947357","https://openalex.org/I4210163538"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5116182598","display_name":"Maxime Alter","orcid":null},"institutions":[{"id":"https://openalex.org/I4210163538","display_name":"H\u00f4pital Civil, Strasbourg","ror":"https://ror.org/05fkq4848","country_code":"FR","type":"healthcare","lineage":["https://openalex.org/I4210145324","https://openalex.org/I4210163538"]},{"id":"https://openalex.org/I68947357","display_name":"Universit\u00e9 de Strasbourg","ror":"https://ror.org/00pg6eq24","country_code":"FR","type":"education","lineage":["https://openalex.org/I68947357"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Maxime Alter","raw_affiliation_strings":["Service de Sant\u00e9 Publique, University Hospital of Strasbourg , Strasbourg, 67000,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Service de Sant\u00e9 Publique, University Hospital of Strasbourg , Strasbourg, 67000,","institution_ids":["https://openalex.org/I68947357","https://openalex.org/I4210163538"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5116182599","display_name":"Archia Chahard","orcid":null},"institutions":[{"id":"https://openalex.org/I4210163538","display_name":"H\u00f4pital Civil, Strasbourg","ror":"https://ror.org/05fkq4848","country_code":"FR","type":"healthcare","lineage":["https://openalex.org/I4210145324","https://openalex.org/I4210163538"]},{"id":"https://openalex.org/I68947357","display_name":"Universit\u00e9 de Strasbourg","ror":"https://ror.org/00pg6eq24","country_code":"FR","type":"education","lineage":["https://openalex.org/I68947357"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Archia Chahard","raw_affiliation_strings":["Service de Sant\u00e9 Publique, University Hospital of Strasbourg , Strasbourg, 67000,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Service de Sant\u00e9 Publique, University Hospital of Strasbourg , Strasbourg, 67000,","institution_ids":["https://openalex.org/I68947357","https://openalex.org/I4210163538"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5116182600","display_name":"Nathan Miraillet","orcid":null},"institutions":[{"id":"https://openalex.org/I4210163538","display_name":"H\u00f4pital Civil, Strasbourg","ror":"https://ror.org/05fkq4848","country_code":"FR","type":"healthcare","lineage":["https://openalex.org/I4210145324","https://openalex.org/I4210163538"]},{"id":"https://openalex.org/I68947357","display_name":"Universit\u00e9 de Strasbourg","ror":"https://ror.org/00pg6eq24","country_code":"FR","type":"education","lineage":["https://openalex.org/I68947357"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Nathan Miraillet","raw_affiliation_strings":["Service de Sant\u00e9 Publique, University Hospital of Strasbourg , Strasbourg, 67000,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Service de Sant\u00e9 Publique, University Hospital of Strasbourg , Strasbourg, 67000,","institution_ids":["https://openalex.org/I68947357","https://openalex.org/I4210163538"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5082641159","display_name":"Adrien Coulet","orcid":"https://orcid.org/0000-0002-1466-062X"},"institutions":[{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I204730241","display_name":"Universit\u00e9 Paris Cit\u00e9","ror":"https://ror.org/05f82e368","country_code":"FR","type":"education","lineage":["https://openalex.org/I204730241"]},{"id":"https://openalex.org/I4210091437","display_name":"Sorbonne Paris Cit\u00e9","ror":"https://ror.org/001z21q04","country_code":"FR","type":"other","lineage":["https://openalex.org/I4210091437"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Adrien Coulet","raw_affiliation_strings":["Inria, Inserm, Universit\u00e9 Paris Cit\u00e9 , Paris, 75013,"],"raw_orcid":"https://orcid.org/0000-0002-1466-062X","affiliations":[{"raw_affiliation_string":"Inria, Inserm, Universit\u00e9 Paris Cit\u00e9 , Paris, 75013,","institution_ids":["https://openalex.org/I154526488","https://openalex.org/I204730241","https://openalex.org/I4210091437"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5108234466","display_name":"Aur\u00e9lie N\u00e9v\u00e9ol","orcid":null},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I277688954","display_name":"Universit\u00e9 Paris-Saclay","ror":"https://ror.org/03xjwb503","country_code":"FR","type":"education","lineage":["https://openalex.org/I277688954"]},{"id":"https://openalex.org/I4387152856","display_name":"Laboratoire Interdisciplinaire des Sciences du Num\u00e9rique","ror":"https://ror.org/00rd81916","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I277688954","https://openalex.org/I4387152856"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Aur\u00e9lie N\u00e9v\u00e9ol","raw_affiliation_strings":["CNRS, LISN, Universit\u00e9 Paris-Saclay , Orsay, 91405,","STL - Sciences et Technologies des Langues - LISN (France)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"CNRS, LISN, Universit\u00e9 Paris-Saclay , Orsay, 91405,","institution_ids":["https://openalex.org/I277688954","https://openalex.org/I1294671590","https://openalex.org/I4387152856"]},{"raw_affiliation_string":"STL - Sciences et Technologies des Langues - LISN (France)","institution_ids":["https://openalex.org/I4387152856"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5050819948"],"corresponding_institution_ids":["https://openalex.org/I154526488","https://openalex.org/I204730241","https://openalex.org/I4210091437","https://openalex.org/I4210163538","https://openalex.org/I68947357"],"apc_list":{"value":3967,"currency":"USD","value_usd":3967},"apc_paid":null,"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.14190867,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"32","issue":"12","first_page":"1855","last_page":"1864"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.40059998631477356,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.40059998631477356,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.32510000467300415,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13083","display_name":"Advanced Text Analysis Techniques","score":0.1145000010728836,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/information-extraction","display_name":"Information extraction","score":0.6050000190734863},{"id":"https://openalex.org/keywords/architecture","display_name":"Architecture","score":0.4650000035762787},{"id":"https://openalex.org/keywords/extraction","display_name":"Extraction (chemistry)","score":0.39149999618530273},{"id":"https://openalex.org/keywords/feature-extraction","display_name":"Feature extraction","score":0.3346000015735626},{"id":"https://openalex.org/keywords/data-extraction","display_name":"Data extraction","score":0.30570000410079956}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7609999775886536},{"id":"https://openalex.org/C195807954","wikidata":"https://www.wikidata.org/wiki/Q1662562","display_name":"Information extraction","level":2,"score":0.6050000190734863},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.49709999561309814},{"id":"https://openalex.org/C123657996","wikidata":"https://www.wikidata.org/wiki/Q12271","display_name":"Architecture","level":2,"score":0.4650000035762787},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.42820000648498535},{"id":"https://openalex.org/C4725764","wikidata":"https://www.wikidata.org/wiki/Q844704","display_name":"Extraction (chemistry)","level":2,"score":0.39149999618530273},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.351500004529953},{"id":"https://openalex.org/C52622490","wikidata":"https://www.wikidata.org/wiki/Q1026626","display_name":"Feature extraction","level":2,"score":0.3346000015735626},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.329800009727478},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.3073999881744385},{"id":"https://openalex.org/C2777466982","wikidata":"https://www.wikidata.org/wiki/Q5227287","display_name":"Data extraction","level":3,"score":0.30570000410079956},{"id":"https://openalex.org/C71472368","wikidata":"https://www.wikidata.org/wiki/Q676880","display_name":"Text mining","level":2,"score":0.2614000141620636},{"id":"https://openalex.org/C180198813","wikidata":"https://www.wikidata.org/wiki/Q121182","display_name":"Information system","level":2,"score":0.250900000333786}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007802","descriptor_name":"Language","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007802","descriptor_name":"Language","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007802","descriptor_name":"Language","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/jamia/ocaf113","is_oa":false,"landing_page_url":"https://doi.org/10.1093/jamia/ocaf113","pdf_url":null,"source":{"id":"https://openalex.org/S129839026","display_name":"Journal of the American Medical Informatics Association","issn_l":"1067-5027","issn":["1067-5027","1527-974X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association","raw_type":"journal-article"},{"id":"pmid:41071911","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/41071911","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association : JAMIA","raw_type":null},{"id":"pmh:oai:HAL:hal-05375038v1","is_oa":true,"landing_page_url":"https://inria.hal.science/hal-05375038","pdf_url":"https://inria.hal.science/hal-05375038v1/document","source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal of the American Medical Informatics Association, 2025, pp.ocaf113. ⟨10.1093/jamia/ocaf113⟩","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"pmh:oai:HAL:hal-05375038v1","is_oa":true,"landing_page_url":"https://inria.hal.science/hal-05375038","pdf_url":"https://inria.hal.science/hal-05375038v1/document","source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal of the American Medical Informatics Association, 2025, pp.ocaf113. ⟨10.1093/jamia/ocaf113⟩","raw_type":"info:eu-repo/semantics/article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4415049233.pdf","grobid_xml":"https://content.openalex.org/works/W4415049233.grobid-xml"},"referenced_works_count":34,"referenced_works":["https://openalex.org/W2002514548","https://openalex.org/W2102575587","https://openalex.org/W2114039834","https://openalex.org/W2342249984","https://openalex.org/W2606769376","https://openalex.org/W2750779823","https://openalex.org/W2758723248","https://openalex.org/W2765488845","https://openalex.org/W2806534782","https://openalex.org/W2808142148","https://openalex.org/W2908840510","https://openalex.org/W2911489562","https://openalex.org/W2944729956","https://openalex.org/W2947596730","https://openalex.org/W2979250794","https://openalex.org/W2979826702","https://openalex.org/W3027260829","https://openalex.org/W3035965352","https://openalex.org/W3099878876","https://openalex.org/W3123984549","https://openalex.org/W3157788795","https://openalex.org/W3196412195","https://openalex.org/W4220997334","https://openalex.org/W4293051190","https://openalex.org/W4308590518","https://openalex.org/W4379379356","https://openalex.org/W4381849850","https://openalex.org/W4391577874","https://openalex.org/W4392267911","https://openalex.org/W4399978597","https://openalex.org/W4400643612","https://openalex.org/W4401042062","https://openalex.org/W4404397460","https://openalex.org/W4404781671"],"related_works":[],"abstract_inverted_index":{"OBJECTIVE:":[0],"To":[1],"evaluate":[2,54],"the":[3,34,72,75,89,116,127,144],"accuracy,":[4],"computational":[5,98,145,203,233],"cost,":[6],"and":[7,38,53,97,132,136,140,153,160,164,201,208,231,235],"portability":[8,73],"of":[9,36,74,118],"a":[10,55,62,179],"new":[11],"natural":[12],"language":[13],"processing":[14],"(NLP)":[15],"method":[16,107],"for":[17,33,162,173,205],"extracting":[18],"medication":[19,44,223],"information":[20,195,224],"from":[21,66,88,225],"clinical":[22,59,84,210,226],"narratives.":[23],"MATERIALS":[24],"AND":[25],"METHODS:":[26],"We":[27],"propose":[28],"an":[29,81,105,169,189],"original":[30],"transformer-based":[31],"architecture":[32,113,191,217],"extraction":[35,95,120,196,199],"entities":[37],"their":[39],"relations":[40],"pertaining":[41],"to":[42,51,221],"patients'":[43],"regimen.":[45],"First,":[46],"we":[47,186],"used":[48,220],"this":[49],"approach":[50,76],"train":[52],"model":[56],"on":[57,83,115,129],"French":[58,131,163,180,207],"notes,":[60],"using":[61,108],"newly":[63],"annotated":[64],"corpus":[65],"H\u00f4pitaux":[67],"Universitaires":[68],"de":[69],"Strasbourg.":[70],"Second,":[71],"was":[77,176],"assessed":[78,101],"by":[79,102,147],"conducting":[80],"evaluation":[82],"documents":[85],"in":[86,178],"English":[87,133,165,174,209],"2018":[90],"n2c2":[91],"shared":[92],"task.":[93],"Information":[94],"accuracy":[96],"cost":[99,146,234],"were":[100],"comparison":[103],"with":[104,126,183,197,228,238],"available":[106],"transformers.":[109],"RESULTS:":[110],"The":[111,215],"proposed":[112,216],"achieves":[114],"task":[117],"relation":[119],"itself":[121],"performance":[122,157,200,230],"that":[123,188],"are":[124],"competitive":[125],"state-of-the-art":[128],"both":[130,206],"(F-measures":[134],"0.82":[135,161],"0.96":[137],"vs":[138],"0.81":[139],"0.95),":[141],"but":[142],"reduces":[143],"10.":[148],"End-to-end":[149],"(Named":[150],"Entity":[151],"recognition":[152],"Relation":[154],"Extraction)":[155],"F1":[156],"is":[158],"0.69":[159],"corpus.":[166],"DISCUSSION:":[167],"While":[168],"existing":[170],"system":[171],"developed":[172],"notes":[175],"deployed":[177],"hospital":[181,241],"setting":[182],"reasonable":[184],"effort,":[185],"found":[187],"alternative":[190],"offered":[192],"end-to-end":[193],"drug":[194],"comparable":[198],"lower":[202],"impact":[204],"text":[211,227],"processing,":[212],"respectively.":[213],"CONCLUSION:":[214],"can":[218],"be":[219],"extract":[222],"high":[229],"low":[232],"consequently":[236],"suits":[237],"usually":[239],"limited":[240],"IT":[242],"resources.":[243]},"counts_by_year":[],"updated_date":"2026-06-23T06:36:01.041984","created_date":"2025-10-11T00:00:00"}