{"id":"https://openalex.org/W4404784267","doi":"https://doi.org/10.1093/jamia/ocae287","title":"LCD benchmark: long clinical document benchmark on mortality prediction for language models","display_name":"LCD benchmark: long clinical document benchmark on mortality prediction for language models","publication_year":2024,"publication_date":"2024-11-02","ids":{"openalex":"https://openalex.org/W4404784267","doi":"https://doi.org/10.1093/jamia/ocae287","pmid":"https://pubmed.ncbi.nlm.nih.gov/39602813"},"language":"en","primary_location":{"id":"doi:10.1093/jamia/ocae287","is_oa":false,"landing_page_url":"https://doi.org/10.1093/jamia/ocae287","pdf_url":null,"source":{"id":"https://openalex.org/S129839026","display_name":"Journal of the American Medical Informatics Association","issn_l":"1067-5027","issn":["1067-5027","1527-974X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11756648/pdf/ocae287.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5012809586","display_name":"Wonjin Yoon","orcid":"https://orcid.org/0000-0002-6435-548X"},"institutions":[{"id":"https://openalex.org/I1288882113","display_name":"Boston Children's Hospital","ror":"https://ror.org/00dvg7y05","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1288882113"]},{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"WonJin Yoon","raw_affiliation_strings":["Computational Health Informatics Program, Boston Children\u2019s Hospital , Boston, MA 02215,","Department of Pediatrics, Harvard Medical School , Boston, MA 02115,"],"raw_orcid":"https://orcid.org/0000-0002-6435-548X","affiliations":[{"raw_affiliation_string":"Computational Health Informatics Program, Boston Children\u2019s Hospital , Boston, MA 02215,","institution_ids":["https://openalex.org/I1288882113"]},{"raw_affiliation_string":"Department of Pediatrics, Harvard Medical School , Boston, MA 02115,","institution_ids":["https://openalex.org/I136199984"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085715940","display_name":"Shan Chen","orcid":"https://orcid.org/0000-0001-7999-7410"},"institutions":[{"id":"https://openalex.org/I1283280774","display_name":"Brigham and Women's Hospital","ror":"https://ror.org/04b6nzv94","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1283280774","https://openalex.org/I48633490"]},{"id":"https://openalex.org/I1288882113","display_name":"Boston Children's Hospital","ror":"https://ror.org/00dvg7y05","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1288882113"]},{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]},{"id":"https://openalex.org/I4210117453","display_name":"Dana-Farber Cancer Institute","ror":"https://ror.org/02jzgtq86","country_code":"US","type":"facility","lineage":["https://openalex.org/I4210117453"]},{"id":"https://openalex.org/I4210161994","display_name":"Dana-Farber Brigham Cancer Center","ror":"https://ror.org/05rgrbr06","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1283280774","https://openalex.org/I4210117453","https://openalex.org/I4210161994","https://openalex.org/I48633490"]},{"id":"https://openalex.org/I48633490","display_name":"Mass General Brigham","ror":"https://ror.org/04py2rh25","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I48633490"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Shan Chen","raw_affiliation_strings":["Artificial Intelligence in Medicine (AIM) Program, Mass General Brigham, Harvard Medical School , Boston, MA 02115,","Computational Health Informatics Program, Boston Children\u2019s Hospital , Boston, MA 02215,","Department of Pediatrics, Harvard Medical School , Boston, MA 02115,","Department of Radiation Oncology, Brigham and Women\u2019s Hospital/Dana-Farber Cancer Institute , Boston, MA 02215,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Artificial Intelligence in Medicine (AIM) Program, Mass General Brigham, Harvard Medical School , Boston, MA 02115,","institution_ids":["https://openalex.org/I48633490","https://openalex.org/I136199984"]},{"raw_affiliation_string":"Computational Health Informatics Program, Boston Children\u2019s Hospital , Boston, MA 02215,","institution_ids":["https://openalex.org/I1288882113"]},{"raw_affiliation_string":"Department of Pediatrics, Harvard Medical School , Boston, MA 02115,","institution_ids":["https://openalex.org/I136199984"]},{"raw_affiliation_string":"Department of Radiation Oncology, Brigham and Women\u2019s Hospital/Dana-Farber Cancer Institute , Boston, MA 02215,","institution_ids":["https://openalex.org/I4210161994","https://openalex.org/I1283280774","https://openalex.org/I4210117453"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101744555","display_name":"Yanjun Gao","orcid":"https://orcid.org/0000-0002-9341-7360"},"institutions":[{"id":"https://openalex.org/I135310074","display_name":"University of Wisconsin\u2013Madison","ror":"https://ror.org/01y2jtd41","country_code":"US","type":"education","lineage":["https://openalex.org/I135310074"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yanjun Gao","raw_affiliation_strings":["Department of Medicine, University of Wisconsin\u2014Madison , Madison, WI 53705,"],"raw_orcid":"https://orcid.org/0000-0002-9341-7360","affiliations":[{"raw_affiliation_string":"Department of Medicine, University of Wisconsin\u2014Madison , Madison, WI 53705,","institution_ids":["https://openalex.org/I135310074"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009987062","display_name":"Zhanzhan Zhao","orcid":null},"institutions":[{"id":"https://openalex.org/I1288882113","display_name":"Boston Children's Hospital","ror":"https://ror.org/00dvg7y05","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1288882113"]},{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Zhanzhan Zhao","raw_affiliation_strings":["Computational Health Informatics Program, Boston Children\u2019s Hospital , Boston, MA 02215,","Department of Pediatrics, Harvard Medical School , Boston, MA 02115,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computational Health Informatics Program, Boston Children\u2019s Hospital , Boston, MA 02215,","institution_ids":["https://openalex.org/I1288882113"]},{"raw_affiliation_string":"Department of Pediatrics, Harvard Medical School , Boston, MA 02115,","institution_ids":["https://openalex.org/I136199984"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054031099","display_name":"Dmitriy Dligach","orcid":"https://orcid.org/0000-0002-2585-2707"},"institutions":[{"id":"https://openalex.org/I1925986","display_name":"Loyola University Chicago","ror":"https://ror.org/04b6x2g63","country_code":"US","type":"education","lineage":["https://openalex.org/I1925986"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Dmitriy Dligach","raw_affiliation_strings":["Department of Computer Science, Loyola University Chicago , Chicago, IL 60660,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Loyola University Chicago , Chicago, IL 60660,","institution_ids":["https://openalex.org/I1925986"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039369605","display_name":"Danielle S. Bitterman","orcid":"https://orcid.org/0000-0003-0345-2232"},"institutions":[{"id":"https://openalex.org/I1283280774","display_name":"Brigham and Women's Hospital","ror":"https://ror.org/04b6nzv94","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1283280774","https://openalex.org/I48633490"]},{"id":"https://openalex.org/I1288882113","display_name":"Boston Children's Hospital","ror":"https://ror.org/00dvg7y05","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1288882113"]},{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]},{"id":"https://openalex.org/I4210117453","display_name":"Dana-Farber Cancer Institute","ror":"https://ror.org/02jzgtq86","country_code":"US","type":"facility","lineage":["https://openalex.org/I4210117453"]},{"id":"https://openalex.org/I4210161994","display_name":"Dana-Farber Brigham Cancer Center","ror":"https://ror.org/05rgrbr06","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1283280774","https://openalex.org/I4210117453","https://openalex.org/I4210161994","https://openalex.org/I48633490"]},{"id":"https://openalex.org/I48633490","display_name":"Mass General Brigham","ror":"https://ror.org/04py2rh25","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I48633490"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Danielle S Bitterman","raw_affiliation_strings":["Artificial Intelligence in Medicine (AIM) Program, Mass General Brigham, Harvard Medical School , Boston, MA 02115,","Computational Health Informatics Program, Boston Children\u2019s Hospital , Boston, MA 02215,","Department of Pediatrics, Harvard Medical School , Boston, MA 02115,","Department of Radiation Oncology, Brigham and Women\u2019s Hospital/Dana-Farber Cancer Institute , Boston, MA 02215,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Artificial Intelligence in Medicine (AIM) Program, Mass General Brigham, Harvard Medical School , Boston, MA 02115,","institution_ids":["https://openalex.org/I48633490","https://openalex.org/I136199984"]},{"raw_affiliation_string":"Computational Health Informatics Program, Boston Children\u2019s Hospital , Boston, MA 02215,","institution_ids":["https://openalex.org/I1288882113"]},{"raw_affiliation_string":"Department of Pediatrics, Harvard Medical School , Boston, MA 02115,","institution_ids":["https://openalex.org/I136199984"]},{"raw_affiliation_string":"Department of Radiation Oncology, Brigham and Women\u2019s Hospital/Dana-Farber Cancer Institute , Boston, MA 02215,","institution_ids":["https://openalex.org/I4210161994","https://openalex.org/I1283280774","https://openalex.org/I4210117453"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063499248","display_name":"Majid Afshar","orcid":"https://orcid.org/0000-0002-6368-4652"},"institutions":[{"id":"https://openalex.org/I135310074","display_name":"University of Wisconsin\u2013Madison","ror":"https://ror.org/01y2jtd41","country_code":"US","type":"education","lineage":["https://openalex.org/I135310074"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Majid Afshar","raw_affiliation_strings":["Department of Medicine, University of Wisconsin\u2014Madison , Madison, WI 53705,"],"raw_orcid":"https://orcid.org/0000-0002-6368-4652","affiliations":[{"raw_affiliation_string":"Department of Medicine, University of Wisconsin\u2014Madison , Madison, WI 53705,","institution_ids":["https://openalex.org/I135310074"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5039901099","display_name":"Timothy A. Miller","orcid":"https://orcid.org/0000-0003-4513-403X"},"institutions":[{"id":"https://openalex.org/I1288882113","display_name":"Boston Children's Hospital","ror":"https://ror.org/00dvg7y05","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1288882113"]},{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Timothy Miller","raw_affiliation_strings":["Computational Health Informatics Program, Boston Children\u2019s Hospital , Boston, MA 02215,","Department of Pediatrics, Harvard Medical School , Boston, MA 02115,"],"raw_orcid":"https://orcid.org/0000-0003-4513-403X","affiliations":[{"raw_affiliation_string":"Computational Health Informatics Program, Boston Children\u2019s Hospital , Boston, MA 02215,","institution_ids":["https://openalex.org/I1288882113"]},{"raw_affiliation_string":"Department of Pediatrics, Harvard Medical School , Boston, MA 02115,","institution_ids":["https://openalex.org/I136199984"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":8,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":3967,"currency":"USD","value_usd":3967},"apc_paid":null,"fwci":1.8328,"has_fulltext":true,"cited_by_count":6,"citation_normalized_percentile":{"value":0.87989626,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":98,"max":99},"biblio":{"volume":"32","issue":"2","first_page":"285","last_page":"295"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T13702","display_name":"Machine Learning in Healthcare","score":0.5006999969482422,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T13702","display_name":"Machine Learning in Healthcare","score":0.5006999969482422,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.12939999997615814,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11636","display_name":"Artificial Intelligence in Healthcare and Education","score":0.11020000278949738,"subfield":{"id":"https://openalex.org/subfields/2718","display_name":"Health Informatics"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/benchmark","display_name":"Benchmark (surveying)","score":0.9244897365570068},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8028923273086548},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.6341451406478882},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.59651118516922},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.5740506052970886},{"id":"https://openalex.org/keywords/convolutional-neural-network","display_name":"Convolutional neural network","score":0.5646616816520691},{"id":"https://openalex.org/keywords/baseline","display_name":"Baseline (sea)","score":0.5501245260238647},{"id":"https://openalex.org/keywords/task","display_name":"Task (project management)","score":0.5082780718803406},{"id":"https://openalex.org/keywords/language-model","display_name":"Language model","score":0.46362924575805664},{"id":"https://openalex.org/keywords/f1-score","display_name":"F1 score","score":0.4629915654659271},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.4563404619693756},{"id":"https://openalex.org/keywords/domain","display_name":"Domain (mathematical analysis)","score":0.4519883096218109},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.39403998851776123}],"concepts":[{"id":"https://openalex.org/C185798385","wikidata":"https://www.wikidata.org/wiki/Q1161707","display_name":"Benchmark (surveying)","level":2,"score":0.9244897365570068},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8028923273086548},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.6341451406478882},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.59651118516922},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.5740506052970886},{"id":"https://openalex.org/C81363708","wikidata":"https://www.wikidata.org/wiki/Q17084460","display_name":"Convolutional neural network","level":2,"score":0.5646616816520691},{"id":"https://openalex.org/C12725497","wikidata":"https://www.wikidata.org/wiki/Q810247","display_name":"Baseline (sea)","level":2,"score":0.5501245260238647},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.5082780718803406},{"id":"https://openalex.org/C137293760","wikidata":"https://www.wikidata.org/wiki/Q3621696","display_name":"Language model","level":2,"score":0.46362924575805664},{"id":"https://openalex.org/C148524875","wikidata":"https://www.wikidata.org/wiki/Q6975395","display_name":"F1 score","level":2,"score":0.4629915654659271},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4563404619693756},{"id":"https://openalex.org/C36503486","wikidata":"https://www.wikidata.org/wiki/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.4519883096218109},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.39403998851776123},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C127313418","wikidata":"https://www.wikidata.org/wiki/Q1069","display_name":"Geology","level":0,"score":0.0},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C111368507","wikidata":"https://www.wikidata.org/wiki/Q43518","display_name":"Oceanography","level":1,"score":0.0},{"id":"https://openalex.org/C187736073","wikidata":"https://www.wikidata.org/wiki/Q2920921","display_name":"Management","level":1,"score":0.0},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0},{"id":"https://openalex.org/C13280743","wikidata":"https://www.wikidata.org/wiki/Q131089","display_name":"Geodesy","level":1,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019985","descriptor_name":"Benchmarking","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019985","descriptor_name":"Benchmarking","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019985","descriptor_name":"Benchmarking","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019985","descriptor_name":"Benchmarking","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019985","descriptor_name":"Benchmarking","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019985","descriptor_name":"Benchmarking","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019985","descriptor_name":"Benchmarking","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019985","descriptor_name":"Benchmarking","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D066264","descriptor_name":"Datasets as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D066264","descriptor_name":"Datasets as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D066264","descriptor_name":"Datasets as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D066264","descriptor_name":"Datasets as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/jamia/ocae287","is_oa":false,"landing_page_url":"https://doi.org/10.1093/jamia/ocae287","pdf_url":null,"source":{"id":"https://openalex.org/S129839026","display_name":"Journal of the American Medical Informatics Association","issn_l":"1067-5027","issn":["1067-5027","1527-974X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association","raw_type":"journal-article"},{"id":"pmid:39602813","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/39602813","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association : JAMIA","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:11756648","is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11756648/","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11756648/pdf/ocae287.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Am Med Inform Assoc","raw_type":"Text"}],"best_oa_location":{"id":"pmh:oai:pubmedcentral.nih.gov:11756648","is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11756648/","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11756648/pdf/ocae287.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Am Med Inform Assoc","raw_type":"Text"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being","score":0.6200000047683716}],"awards":[{"id":"https://openalex.org/G3041837563","display_name":null,"funder_award_id":"R01LM012973","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G4271107310","display_name":null,"funder_award_id":"R01MH126977","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"}],"funders":[{"id":"https://openalex.org/F4320321373","display_name":"Korea University","ror":"https://ror.org/047dqcg40"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337346","display_name":"National Institute of Mental Health","ror":"https://ror.org/04xeg9z08"},{"id":"https://openalex.org/F4320337372","display_name":"U.S. National Library of Medicine","ror":"https://ror.org/0060t0j89"}],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4404784267.pdf"},"referenced_works_count":30,"referenced_works":["https://openalex.org/W1958810146","https://openalex.org/W2127515011","https://openalex.org/W2137401089","https://openalex.org/W2147016542","https://openalex.org/W2160733129","https://openalex.org/W2160759345","https://openalex.org/W2165600579","https://openalex.org/W2216062981","https://openalex.org/W2396881363","https://openalex.org/W2597505554","https://openalex.org/W2899412767","https://openalex.org/W2904250440","https://openalex.org/W2911489562","https://openalex.org/W2967056613","https://openalex.org/W2974799567","https://openalex.org/W2991276919","https://openalex.org/W2993873509","https://openalex.org/W3046375318","https://openalex.org/W3092301826","https://openalex.org/W3101973032","https://openalex.org/W3160938575","https://openalex.org/W4283462007","https://openalex.org/W4310568840","https://openalex.org/W4312220150","https://openalex.org/W4323654151","https://openalex.org/W4327810158","https://openalex.org/W4366280062","https://openalex.org/W4384944769","https://openalex.org/W4387225871","https://openalex.org/W6688275366"],"related_works":["https://openalex.org/W2378211422","https://openalex.org/W2383111961","https://openalex.org/W2365952365","https://openalex.org/W2352448290","https://openalex.org/W2380820513","https://openalex.org/W4321353415","https://openalex.org/W2913146933","https://openalex.org/W2745001401","https://openalex.org/W2372385138","https://openalex.org/W4296359239"],"abstract_inverted_index":{"OBJECTIVES:":[0],"The":[1],"application":[2],"of":[3,40,53,61,64,72,76,108,116,153,162,199,204,243],"natural":[4],"language":[5,73,145],"processing":[6],"(NLP)":[7],"in":[8,20,27,187,191],"the":[9,16,38,51,59,62,65,69,106,154,205,221,228,241],"clinical":[10,21,83,252],"domain":[11],"is":[12,43,212],"important":[13],"due":[14],"to":[15,34,142,165,236],"rich":[17],"unstructured":[18],"information":[19],"documents,":[22],"which":[23],"often":[24],"remains":[25],"inaccessible":[26],"structured":[28],"data.":[29,127],"When":[30],"applying":[31],"NLP":[32],"methods":[33],"a":[35,103,150,195,238],"certain":[36],"domain,":[37],"role":[39],"benchmark":[41,46,79,104,131,235],"datasets":[42,47,80],"crucial":[44],"as":[45],"not":[48],"only":[49],"guide":[50],"selection":[52],"best-performing":[54,180],"models":[55,74,176,182,216,222],"but":[56,220],"also":[57],"enable":[58],"assessment":[60],"reliability":[63],"generated":[66],"outputs.":[67],"Despite":[68],"recent":[70],"availability":[71],"capable":[75],"longer":[77],"context,":[78],"targeting":[81],"long":[82],"document":[84],"classification":[85],"tasks":[86],"are":[87],"absent.":[88],"MATERIALS":[89],"AND":[90],"METHODS:":[91],"To":[92],"address":[93],"this":[94,130],"issue,":[95],"we":[96,148],"propose":[97],"Long":[98],"Clinical":[99],"Document":[100],"(LCD)":[101],"benchmark,":[102],"for":[105,120,179,185,214,240,251],"task":[107],"predicting":[109],"30-day":[110],"out-of-hospital":[111],"mortality":[112],"using":[113,133],"discharge":[114],"notes":[115],"Medical":[117],"Information":[118],"Mart":[119],"Intensive":[121],"Care":[122],"IV":[123],"and":[124,138,160,172,183,217],"statewide":[125],"death":[126],"We":[128,231],"evaluated":[129],"dataset":[132,193,211],"baseline":[134],"models,":[135,246],"from":[136,227],"bag-of-words":[137],"convolutional":[139],"neural":[140],"network":[141],"instruction-tuned":[143],"large":[144],"models.":[146],"Additionally,":[147],"provide":[149],"comprehensive":[151],"analysis":[152,203],"model":[155,163,206],"outputs,":[156],"including":[157],"manual":[158],"review":[159],"visualization":[161],"weights,":[164],"offer":[166],"insights":[167],"into":[168],"their":[169],"predictive":[170],"capabilities":[171],"limitations.":[173],"RESULTS:":[174],"Baseline":[175],"showed":[177,208],"28.9%":[178],"supervised":[181,245],"32.2%":[184],"GPT-4":[186],"F1":[188],"metrics.":[189],"Notes":[190],"our":[192,210,233],"have":[194],"median":[196],"word":[197],"count":[198],"1687.":[200],"DISCUSSION:":[201],"Our":[202],"outputs":[207],"that":[209],"challenging":[213],"both":[215],"human":[218],"experts,":[219],"can":[223],"find":[224],"meaningful":[225],"signals":[226],"text.":[229,253],"CONCLUSION:":[230],"expect":[232],"LCD":[234],"be":[237],"resource":[239],"development":[242],"advanced":[244],"or":[247],"prompting":[248],"methods,":[249],"tailored":[250]},"counts_by_year":[{"year":2025,"cited_by_count":6}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
