{"id":"https://openalex.org/W4389903773","doi":"https://doi.org/10.1093/jamia/ocad241","title":"Data-driven automated classification algorithms for acute health conditions: applying PheNorm to COVID-19 disease","display_name":"Data-driven automated classification algorithms for acute health conditions: applying PheNorm to COVID-19 disease","publication_year":2023,"publication_date":"2023-12-18","ids":{"openalex":"https://openalex.org/W4389903773","doi":"https://doi.org/10.1093/jamia/ocad241","pmid":"https://pubmed.ncbi.nlm.nih.gov/38109888"},"language":"en","primary_location":{"id":"doi:10.1093/jamia/ocad241","is_oa":false,"landing_page_url":"https://doi.org/10.1093/jamia/ocad241","pdf_url":null,"source":{"id":"https://openalex.org/S129839026","display_name":"Journal of the American Medical Informatics Association","issn_l":"1067-5027","issn":["1067-5027","1527-974X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10873852/pdf/ocad241.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5102928402","display_name":"Joshua Smith","orcid":"https://orcid.org/0000-0003-2661-3203"},"institutions":[{"id":"https://openalex.org/I901861585","display_name":"Vanderbilt University Medical Center","ror":"https://ror.org/05dq2gs74","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210162197","https://openalex.org/I901861585"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Joshua C Smith","raw_affiliation_strings":["Department of Biomedical Informatics, Vanderbilt University Medical Center , Nashville, TN 37203, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedical Informatics, Vanderbilt University Medical Center , Nashville, TN 37203, United States","institution_ids":["https://openalex.org/I901861585"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103218929","display_name":"Brian D. Williamson","orcid":"https://orcid.org/0000-0002-7024-548X"},"institutions":[{"id":"https://openalex.org/I150117356","display_name":"Kaiser Permanente Washington Health Research Institute","ror":"https://ror.org/0027frf26","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I150117356"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Brian D Williamson","raw_affiliation_strings":["Kaiser Permanente Washington Health Research Institute , Seattle, WA 98101, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Kaiser Permanente Washington Health Research Institute , Seattle, WA 98101, United States","institution_ids":["https://openalex.org/I150117356"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054315152","display_name":"David Cronkite","orcid":"https://orcid.org/0000-0002-2797-5102"},"institutions":[{"id":"https://openalex.org/I150117356","display_name":"Kaiser Permanente Washington Health Research Institute","ror":"https://ror.org/0027frf26","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I150117356"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"David J Cronkite","raw_affiliation_strings":["Kaiser Permanente Washington Health Research Institute , Seattle, WA 98101, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Kaiser Permanente Washington Health Research Institute , Seattle, WA 98101, United States","institution_ids":["https://openalex.org/I150117356"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100613715","display_name":"Daniel Park","orcid":"https://orcid.org/0000-0002-1919-0460"},"institutions":[{"id":"https://openalex.org/I901861585","display_name":"Vanderbilt University Medical Center","ror":"https://ror.org/05dq2gs74","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210162197","https://openalex.org/I901861585"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Daniel Park","raw_affiliation_strings":["Department of Biomedical Informatics, Vanderbilt University Medical Center , Nashville, TN 37203, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedical Informatics, Vanderbilt University Medical Center , Nashville, TN 37203, United States","institution_ids":["https://openalex.org/I901861585"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5113074453","display_name":"Jill M Whitaker","orcid":null},"institutions":[{"id":"https://openalex.org/I901861585","display_name":"Vanderbilt University Medical Center","ror":"https://ror.org/05dq2gs74","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210162197","https://openalex.org/I901861585"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jill M Whitaker","raw_affiliation_strings":["Department of Biomedical Informatics, Vanderbilt University Medical Center , Nashville, TN 37203, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedical Informatics, Vanderbilt University Medical Center , Nashville, TN 37203, United States","institution_ids":["https://openalex.org/I901861585"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087712761","display_name":"Michael F McLemore","orcid":null},"institutions":[{"id":"https://openalex.org/I901861585","display_name":"Vanderbilt University Medical Center","ror":"https://ror.org/05dq2gs74","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210162197","https://openalex.org/I901861585"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Michael F McLemore","raw_affiliation_strings":["Department of Biomedical Informatics, Vanderbilt University Medical Center , Nashville, TN 37203, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedical Informatics, Vanderbilt University Medical Center , Nashville, TN 37203, United States","institution_ids":["https://openalex.org/I901861585"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5093524480","display_name":"Joshua T Osmanski","orcid":null},"institutions":[{"id":"https://openalex.org/I901861585","display_name":"Vanderbilt University Medical Center","ror":"https://ror.org/05dq2gs74","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210162197","https://openalex.org/I901861585"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Joshua T Osmanski","raw_affiliation_strings":["Department of Biomedical Informatics, Vanderbilt University Medical Center , Nashville, TN 37203, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedical Informatics, Vanderbilt University Medical Center , Nashville, TN 37203, United States","institution_ids":["https://openalex.org/I901861585"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017394048","display_name":"Robert Winter","orcid":"https://orcid.org/0000-0002-5013-503X"},"institutions":[{"id":"https://openalex.org/I901861585","display_name":"Vanderbilt University Medical Center","ror":"https://ror.org/05dq2gs74","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210162197","https://openalex.org/I901861585"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Robert Winter","raw_affiliation_strings":["Department of Biomedical Informatics, Vanderbilt University Medical Center , Nashville, TN 37203, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedical Informatics, Vanderbilt University Medical Center , Nashville, TN 37203, United States","institution_ids":["https://openalex.org/I901861585"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5059181194","display_name":"Arvind Ramaprasan","orcid":null},"institutions":[{"id":"https://openalex.org/I150117356","display_name":"Kaiser Permanente Washington Health Research Institute","ror":"https://ror.org/0027frf26","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I150117356"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Arvind Ramaprasan","raw_affiliation_strings":["Kaiser Permanente Washington Health Research Institute , Seattle, WA 98101, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Kaiser Permanente Washington Health Research Institute , Seattle, WA 98101, United States","institution_ids":["https://openalex.org/I150117356"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110135634","display_name":"Ann E. Kelley","orcid":null},"institutions":[{"id":"https://openalex.org/I150117356","display_name":"Kaiser Permanente Washington Health Research Institute","ror":"https://ror.org/0027frf26","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I150117356"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ann Kelley","raw_affiliation_strings":["Kaiser Permanente Washington Health Research Institute , Seattle, WA 98101, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Kaiser Permanente Washington Health Research Institute , Seattle, WA 98101, United States","institution_ids":["https://openalex.org/I150117356"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111064125","display_name":"Mary Shea","orcid":null},"institutions":[{"id":"https://openalex.org/I150117356","display_name":"Kaiser Permanente Washington Health Research Institute","ror":"https://ror.org/0027frf26","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I150117356"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Mary Shea","raw_affiliation_strings":["Kaiser Permanente Washington Health Research Institute , Seattle, WA 98101, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Kaiser Permanente Washington Health Research Institute , Seattle, WA 98101, United States","institution_ids":["https://openalex.org/I150117356"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021256390","display_name":"Saranrat Wittayanukorn","orcid":"https://orcid.org/0000-0001-7371-677X"},"institutions":[{"id":"https://openalex.org/I1320320070","display_name":"United States Food and Drug Administration","ror":"https://ror.org/034xvzb47","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1320320070"]},{"id":"https://openalex.org/I1333606569","display_name":"Center for Drug Evaluation and Research","ror":"https://ror.org/00yf3tm42","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1320320070","https://openalex.org/I1333606569"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Saranrat Wittayanukorn","raw_affiliation_strings":["Center for Drug Evaluation and Research, US Food and Drug Administration , Silver Spring, MD 20903, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Drug Evaluation and Research, US Food and Drug Administration , Silver Spring, MD 20903, United States","institution_ids":["https://openalex.org/I1333606569","https://openalex.org/I1320320070"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102905653","display_name":"Danijela Stojanovi\u0107","orcid":"https://orcid.org/0000-0001-7814-7625"},"institutions":[{"id":"https://openalex.org/I1320320070","display_name":"United States Food and Drug Administration","ror":"https://ror.org/034xvzb47","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1320320070"]},{"id":"https://openalex.org/I1333606569","display_name":"Center for Drug Evaluation and Research","ror":"https://ror.org/00yf3tm42","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1320320070","https://openalex.org/I1333606569"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Danijela Stojanovic","raw_affiliation_strings":["Center for Drug Evaluation and Research, US Food and Drug Administration , Silver Spring, MD 20903, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Drug Evaluation and Research, US Food and Drug Administration , Silver Spring, MD 20903, United States","institution_ids":["https://openalex.org/I1333606569","https://openalex.org/I1320320070"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021380975","display_name":"Yueqin Zhao","orcid":null},"institutions":[{"id":"https://openalex.org/I1320320070","display_name":"United States Food and Drug Administration","ror":"https://ror.org/034xvzb47","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1320320070"]},{"id":"https://openalex.org/I1333606569","display_name":"Center for Drug Evaluation and Research","ror":"https://ror.org/00yf3tm42","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1320320070","https://openalex.org/I1333606569"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yueqin Zhao","raw_affiliation_strings":["Center for Drug Evaluation and Research, US Food and Drug Administration , Silver Spring, MD 20903, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Drug Evaluation and Research, US Food and Drug Administration , Silver Spring, MD 20903, United States","institution_ids":["https://openalex.org/I1333606569","https://openalex.org/I1320320070"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067236770","display_name":"Sengwee Toh","orcid":"https://orcid.org/0000-0002-5160-0810"},"institutions":[{"id":"https://openalex.org/I4210111543","display_name":"Harvard Pilgrim Health Care","ror":"https://ror.org/01zxdeg39","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210111543"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sengwee Toh","raw_affiliation_strings":["Harvard Pilgrim Health Care Institute , Boston, MA 02215, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Harvard Pilgrim Health Care Institute , Boston, MA 02215, United States","institution_ids":["https://openalex.org/I4210111543"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051551743","display_name":"Kevin B. Johnson","orcid":"https://orcid.org/0000-0003-1016-9363"},"institutions":[{"id":"https://openalex.org/I79576946","display_name":"University of Pennsylvania","ror":"https://ror.org/00b30xv10","country_code":"US","type":"education","lineage":["https://openalex.org/I79576946"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kevin B Johnson","raw_affiliation_strings":["Department of Biostatistics, Epidemiology and Informatics, University of Pennsylvania , Philadelphia, PA 19104, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biostatistics, Epidemiology and Informatics, University of Pennsylvania , Philadelphia, PA 19104, United States","institution_ids":["https://openalex.org/I79576946"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084296885","display_name":"David M. Aronoff","orcid":"https://orcid.org/0000-0003-4587-6121"},"institutions":[{"id":"https://openalex.org/I4394709130","display_name":"Indiana University School of Medicine","ror":"https://ror.org/02ets8c94","country_code":null,"type":"education","lineage":["https://openalex.org/I4394709130","https://openalex.org/I592451"]},{"id":"https://openalex.org/I55769427","display_name":"Indiana University \u2013 Purdue University Indianapolis","ror":"https://ror.org/05gxnyn08","country_code":"US","type":"education","lineage":["https://openalex.org/I55769427","https://openalex.org/I592451"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"David M Aronoff","raw_affiliation_strings":["Department of Medicine, Indiana University School of Medicine , Indianapolis, IN 46202, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Medicine, Indiana University School of Medicine , Indianapolis, IN 46202, United States","institution_ids":["https://openalex.org/I55769427","https://openalex.org/I4394709130"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5041212198","display_name":"David Carrell","orcid":"https://orcid.org/0000-0002-8471-0928"},"institutions":[{"id":"https://openalex.org/I150117356","display_name":"Kaiser Permanente Washington Health Research Institute","ror":"https://ror.org/0027frf26","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I150117356"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"David S Carrell","raw_affiliation_strings":["Kaiser Permanente Washington Health Research Institute , Seattle, WA 98101, United States"],"raw_orcid":"https://orcid.org/0000-0002-8471-0928","affiliations":[{"raw_affiliation_string":"Kaiser Permanente Washington Health Research Institute , Seattle, WA 98101, United States","institution_ids":["https://openalex.org/I150117356"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5102928402"],"corresponding_institution_ids":["https://openalex.org/I901861585"],"apc_list":{"value":3967,"currency":"USD","value_usd":3967},"apc_paid":null,"fwci":1.7585,"has_fulltext":true,"cited_by_count":11,"citation_normalized_percentile":{"value":0.8746756,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"31","issue":"3","first_page":"574","last_page":"582"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T13702","display_name":"Machine Learning in Healthcare","score":0.4016000032424927,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T13702","display_name":"Machine Learning in Healthcare","score":0.4016000032424927,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11775","display_name":"COVID-19 diagnosis using AI","score":0.20990000665187836,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11636","display_name":"Artificial Intelligence in Healthcare and Education","score":0.07919999957084656,"subfield":{"id":"https://openalex.org/subfields/2718","display_name":"Health Informatics"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/feature-engineering","display_name":"Feature engineering","score":0.6774038076400757},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6394586563110352},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.6252034902572632},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5767773389816284},{"id":"https://openalex.org/keywords/feature","display_name":"Feature (linguistics)","score":0.5412231683731079},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.5350967645645142},{"id":"https://openalex.org/keywords/overhead","display_name":"Overhead (engineering)","score":0.5276573896408081},{"id":"https://openalex.org/keywords/gold-standard","display_name":"Gold standard (test)","score":0.48101434111595154},{"id":"https://openalex.org/keywords/coronavirus-disease-2019","display_name":"Coronavirus disease 2019 (COVID-19)","score":0.4675627648830414},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.32626980543136597},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.23514270782470703},{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.19310280680656433},{"id":"https://openalex.org/keywords/deep-learning","display_name":"Deep learning","score":0.17603716254234314},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.14970442652702332},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.1212950050830841}],"concepts":[{"id":"https://openalex.org/C2778827112","wikidata":"https://www.wikidata.org/wiki/Q22245680","display_name":"Feature engineering","level":3,"score":0.6774038076400757},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6394586563110352},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.6252034902572632},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5767773389816284},{"id":"https://openalex.org/C2776401178","wikidata":"https://www.wikidata.org/wiki/Q12050496","display_name":"Feature (linguistics)","level":2,"score":0.5412231683731079},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.5350967645645142},{"id":"https://openalex.org/C2779960059","wikidata":"https://www.wikidata.org/wiki/Q7113681","display_name":"Overhead (engineering)","level":2,"score":0.5276573896408081},{"id":"https://openalex.org/C40993552","wikidata":"https://www.wikidata.org/wiki/Q514654","display_name":"Gold standard (test)","level":2,"score":0.48101434111595154},{"id":"https://openalex.org/C3008058167","wikidata":"https://www.wikidata.org/wiki/Q84263196","display_name":"Coronavirus disease 2019 (COVID-19)","level":4,"score":0.4675627648830414},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.32626980543136597},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.23514270782470703},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.19310280680656433},{"id":"https://openalex.org/C108583219","wikidata":"https://www.wikidata.org/wiki/Q197536","display_name":"Deep learning","level":2,"score":0.17603716254234314},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.14970442652702332},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.1212950050830841},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0},{"id":"https://openalex.org/C524204448","wikidata":"https://www.wikidata.org/wiki/Q788926","display_name":"Infectious disease (medical specialty)","level":3,"score":0.0},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012834","descriptor_name":"Silver","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/jamia/ocad241","is_oa":false,"landing_page_url":"https://doi.org/10.1093/jamia/ocad241","pdf_url":null,"source":{"id":"https://openalex.org/S129839026","display_name":"Journal of the American Medical Informatics Association","issn_l":"1067-5027","issn":["1067-5027","1527-974X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association","raw_type":"journal-article"},{"id":"pmid:38109888","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/38109888","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association : JAMIA","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:10873852","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10873852","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10873852/pdf/ocad241.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Am Med Inform Assoc","raw_type":"Text"},{"id":"pmh:oai:scholarworks.indianapolis.iu.edu:1805/45403","is_oa":false,"landing_page_url":"https://scholarworks.indianapolis.iu.edu/items/660733f7-4839-49cb-809c-042d79585b42/request-a-copy?bitstream=40c7fb73-d982-4511-b360-73f08da2c053","pdf_url":null,"source":{"id":"https://openalex.org/S4306400987","display_name":"IUScholarWorks (Indiana University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I592451","host_organization_name":"Indiana University","host_organization_lineage":["https://openalex.org/I592451"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PMC","raw_type":"Article"}],"best_oa_location":{"id":"pmh:oai:pubmedcentral.nih.gov:10873852","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10873852","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10873852/pdf/ocad241.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Am Med Inform Assoc","raw_type":"Text"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1849135719","display_name":null,"funder_award_id":"UL1 TR002243","funder_id":"https://openalex.org/F4320337472","funder_display_name":"National Center for Advancing Translational Sciences"},{"id":"https://openalex.org/G3303367877","display_name":null,"funder_award_id":"TR002243","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G4334719191","display_name":null,"funder_award_id":"UL1 TR002243","funder_id":"https://openalex.org/F4320309151","funder_display_name":"Vanderbilt University"},{"id":"https://openalex.org/G4410787187","display_name":null,"funder_award_id":"UL1 TR002243","funder_id":"https://openalex.org/F4320313998","funder_display_name":"Vanderbilt University Medical Center"},{"id":"https://openalex.org/G4421793660","display_name":null,"funder_award_id":"UL1 TR002243","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G5036448368","display_name":null,"funder_award_id":"TR002243","funder_id":"https://openalex.org/F4320332163","funder_display_name":"U.S. Food and Drug Administration"},{"id":"https://openalex.org/G5519757255","display_name":null,"funder_award_id":"UL1 TR002243","funder_id":"https://openalex.org/F4320316438","funder_display_name":"Georgia Clinical and Translational Science Alliance"},{"id":"https://openalex.org/G5580019600","display_name":null,"funder_award_id":"TR002243","funder_id":"https://openalex.org/F4320337472","funder_display_name":"National Center for Advancing Translational Sciences"},{"id":"https://openalex.org/G7899721138","display_name":null,"funder_award_id":"75F40119F19002","funder_id":"https://openalex.org/F4320332163","funder_display_name":"U.S. Food and Drug Administration"},{"id":"https://openalex.org/G7928494562","display_name":null,"funder_award_id":"75F40119D10037","funder_id":"https://openalex.org/F4320332163","funder_display_name":"U.S. Food and Drug Administration"}],"funders":[{"id":"https://openalex.org/F4320309151","display_name":"Vanderbilt University","ror":"https://ror.org/02vm5rt34"},{"id":"https://openalex.org/F4320313998","display_name":"Vanderbilt University Medical Center","ror":"https://ror.org/05dq2gs74"},{"id":"https://openalex.org/F4320316438","display_name":"Georgia Clinical and Translational Science Alliance","ror":null},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320332163","display_name":"U.S. Food and Drug Administration","ror":"https://ror.org/034xvzb47"},{"id":"https://openalex.org/F4320337472","display_name":"National Center for Advancing Translational Sciences","ror":"https://ror.org/04pw6fb54"}],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4389903773.pdf"},"referenced_works_count":20,"referenced_works":["https://openalex.org/W2076859422","https://openalex.org/W2105637130","https://openalex.org/W2131668595","https://openalex.org/W2209559096","https://openalex.org/W2283222487","https://openalex.org/W2356882517","https://openalex.org/W2520392019","https://openalex.org/W2765693998","https://openalex.org/W2902452806","https://openalex.org/W2961010067","https://openalex.org/W2965414772","https://openalex.org/W3006913750","https://openalex.org/W3016229786","https://openalex.org/W3088156227","https://openalex.org/W3129774053","https://openalex.org/W3208046866","https://openalex.org/W4200121889","https://openalex.org/W4280596853","https://openalex.org/W4292807770","https://openalex.org/W4389903773"],"related_works":["https://openalex.org/W4205698903","https://openalex.org/W4400613637","https://openalex.org/W4294968941","https://openalex.org/W4283819461","https://openalex.org/W2750075801","https://openalex.org/W3164948662","https://openalex.org/W4400413234","https://openalex.org/W3153597579","https://openalex.org/W4394398790","https://openalex.org/W4399455186"],"abstract_inverted_index":{"OBJECTIVES:":[0],"Automated":[1],"phenotyping":[2,55],"algorithms":[3,73,176],"can":[4],"reduce":[5],"development":[6],"time":[7],"and":[8,40,81,99,117,133,141,144,168,191],"operator":[9],"dependence":[10],"compared":[11,241],"to":[12,44,48,69,90,106,230,242],"manually":[13],"developed":[14,177,196],"algorithms.":[15],"One":[16],"such":[17],"approach,":[18],"PheNorm,":[19],"has":[20],"performed":[21,180],"well":[22,181,203],"for":[23,31,53,159],"identifying":[24],"chronic":[25],"health":[26,58,218],"conditions,":[27],"but":[28],"its":[29,50],"performance":[30,111,157],"acute":[32,57,217],"conditions":[33],"is":[34,64],"largely":[35],"unknown.":[36],"Herein,":[37],"we":[38],"implement":[39],"evaluate":[41],"PheNorm":[42,63,89,179,212,226],"applied":[43,88,232],"symptomatic":[45,220],"COVID-19":[46,94],"disease":[47],"investigate":[49,107],"potential":[51,93],"feasibility":[52],"rapid":[54],"of":[56,92,112,137,149,162,224],"conditions.":[59],"MATERIALS":[60],"AND":[61],"METHODS:":[62],"a":[65],"general-purpose":[66],"automated":[67],"approach":[68,227],"creating":[70],"computable":[71],"phenotype":[72],"based":[74],"on":[75,110],"natural":[76],"language":[77],"processing,":[78],"machine":[79],"learning,":[80],"(low":[82],"cost)":[83],"silver-standard":[84,189],"training":[85],"labels.":[86],"We":[87,155],"cohorts":[91],"patients":[95],"from":[96],"2":[97],"institutions":[98],"used":[100],"gold-standard":[101],"manual":[102],"chart":[103],"review":[104],"data":[105],"the":[108,208,225],"impact":[109],"alternative":[113],"feature":[114,165,192],"engineering":[115,166,193],"options":[116],"implementing":[118],"externally":[119,206],"trained":[120,170],"models":[121,169,213],"without":[122],"local":[123],"retraining.":[124],"RESULTS:":[125],"Models":[126,195],"at":[127,147,182,198,207,233],"each":[128],"institution":[129],"achieved":[130],"AUC,":[131],"sensitivity,":[132],"positive":[134],"predictive":[135],"value":[136],"0.853,":[138],"0.879,":[139],"0.851":[140],"0.804,":[142],"0.976,":[143],"0.885,":[145],"respectively,":[146],"quantiles":[148],"model-predicted":[150],"risk":[151],"that":[152],"maximize":[153],"F1.":[154],"report":[156],"metrics":[158],"all":[160],"combinations":[161],"silver":[163],"labels,":[164],"options,":[167],"internally":[171],"versus":[172],"externally.":[173],"DISCUSSION:":[174],"Phenotyping":[175],"using":[178],"both":[183],"institutions.":[184],"Performance":[185],"varied":[186],"with":[187,237],"different":[188],"labels":[190],"options.":[194],"locally":[197],"one":[199],"site":[200],"also":[201],"worked":[202],"when":[204],"implemented":[205],"other":[209],"site.":[210],"CONCLUSION:":[211],"successfully":[214],"identified":[215],"an":[216],"condition,":[219],"COVID-19.":[221],"The":[222],"simplicity":[223],"allows":[228],"it":[229],"be":[231],"multiple":[234],"study":[235],"sites":[236],"substantially":[238],"reduced":[239],"overhead":[240],"traditional":[243],"approaches.":[244]},"counts_by_year":[{"year":2026,"cited_by_count":3},{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":4},{"year":2023,"cited_by_count":1}],"updated_date":"2026-07-03T08:13:44.112507","created_date":"2025-10-10T00:00:00"}
