{"id":"https://openalex.org/W4387117651","doi":"https://doi.org/10.1093/jamia/ocad182","title":"Selective prediction for extracting unstructured clinical data","display_name":"Selective prediction for extracting unstructured clinical data","publication_year":2023,"publication_date":"2023-09-28","ids":{"openalex":"https://openalex.org/W4387117651","doi":"https://doi.org/10.1093/jamia/ocad182","pmid":"https://pubmed.ncbi.nlm.nih.gov/37769323"},"language":"en","primary_location":{"id":"doi:10.1093/jamia/ocad182","is_oa":true,"landing_page_url":"https://doi.org/10.1093/jamia/ocad182","pdf_url":"https://academic.oup.com/jamia/advance-article-pdf/doi/10.1093/jamia/ocad182/51791317/ocad182.pdf","source":{"id":"https://openalex.org/S129839026","display_name":"Journal of the American Medical Informatics Association","issn_l":"1067-5027","issn":["1067-5027","1527-974X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/jamia/advance-article-pdf/doi/10.1093/jamia/ocad182/51791317/ocad182.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5079965457","display_name":"Akshay Swaminathan","orcid":"https://orcid.org/0000-0003-3426-9289"},"institutions":[{"id":"https://openalex.org/I1303377637","display_name":"United Cerebral Palsy","ror":"https://ror.org/03jhrww64","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1303377637"]},{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Akshay Swaminathan","raw_affiliation_strings":["Cerebral Inc. Claymont, DE, United States","Stanford University School of Medicine , Stanford, CA, United States"],"raw_orcid":"https://orcid.org/0000-0003-3426-9289","affiliations":[{"raw_affiliation_string":"Cerebral Inc. Claymont, DE, United States","institution_ids":["https://openalex.org/I1303377637"]},{"raw_affiliation_string":"Stanford University School of Medicine , Stanford, CA, United States","institution_ids":["https://openalex.org/I97018004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084224715","display_name":"Iv\u00e1n L\u00f3pez","orcid":null},"institutions":[{"id":"https://openalex.org/I1303377637","display_name":"United Cerebral Palsy","ror":"https://ror.org/03jhrww64","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1303377637"]},{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ivan Lopez","raw_affiliation_strings":["Cerebral Inc. Claymont, DE, United States","Stanford University School of Medicine , Stanford, CA, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Cerebral Inc. Claymont, DE, United States","institution_ids":["https://openalex.org/I1303377637"]},{"raw_affiliation_string":"Stanford University School of Medicine , Stanford, CA, United States","institution_ids":["https://openalex.org/I97018004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100702488","display_name":"William Yang Wang","orcid":"https://orcid.org/0000-0002-0878-1257"},"institutions":[{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"William Wang","raw_affiliation_strings":["Department of Bioengineering, Stanford University , Stanford, CA, United States","Department of Biology, Stanford University , Stanford, CA, United States"],"raw_orcid":"https://orcid.org/0000-0002-0878-1257","affiliations":[{"raw_affiliation_string":"Department of Bioengineering, Stanford University , Stanford, CA, United States","institution_ids":["https://openalex.org/I97018004"]},{"raw_affiliation_string":"Department of Biology, Stanford University , Stanford, CA, United States","institution_ids":["https://openalex.org/I97018004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006848258","display_name":"Ujwal Srivastava","orcid":"https://orcid.org/0000-0001-6542-1218"},"institutions":[{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ujwal Srivastava","raw_affiliation_strings":["Department of Computer Science, Stanford University , Stanford, CA, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Stanford University , Stanford, CA, United States","institution_ids":["https://openalex.org/I97018004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102804503","display_name":"Edward Tran","orcid":"https://orcid.org/0009-0005-4327-0291"},"institutions":[{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Edward Tran","raw_affiliation_strings":["Department of Computer Science, Stanford University , Stanford, CA, United States","Department of Management Science and Engineering, Stanford University , Stanford, CA, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Stanford University , Stanford, CA, United States","institution_ids":["https://openalex.org/I97018004"]},{"raw_affiliation_string":"Department of Management Science and Engineering, Stanford University , Stanford, CA, United States","institution_ids":["https://openalex.org/I97018004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051176302","display_name":"Aarohi Bhargava-Shah","orcid":"https://orcid.org/0000-0001-7404-5146"},"institutions":[{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Aarohi Bhargava-Shah","raw_affiliation_strings":["Stanford University School of Medicine , Stanford, CA, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Stanford University School of Medicine , Stanford, CA, United States","institution_ids":["https://openalex.org/I97018004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062204809","display_name":"Janet Y. Wu","orcid":"https://orcid.org/0000-0002-0626-6497"},"institutions":[{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Janet Y Wu","raw_affiliation_strings":["Stanford University School of Medicine , Stanford, CA, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Stanford University School of Medicine , Stanford, CA, United States","institution_ids":["https://openalex.org/I97018004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5013104277","display_name":"Alexander Ren","orcid":"https://orcid.org/0000-0002-3369-4518"},"institutions":[{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Alexander L Ren","raw_affiliation_strings":["Stanford University School of Medicine , Stanford, CA, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Stanford University School of Medicine , Stanford, CA, United States","institution_ids":["https://openalex.org/I97018004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5041281665","display_name":"Kaitlin Caoili","orcid":null},"institutions":[{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kaitlin Caoili","raw_affiliation_strings":["Stanford University School of Medicine , Stanford, CA, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Stanford University School of Medicine , Stanford, CA, United States","institution_ids":["https://openalex.org/I97018004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046853736","display_name":"Brandon Bui","orcid":null},"institutions":[{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Brandon Bui","raw_affiliation_strings":["Department of Human Biology, Stanford University , Stanford, CA, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Human Biology, Stanford University , Stanford, CA, United States","institution_ids":["https://openalex.org/I97018004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047636171","display_name":"Layth Alkhani","orcid":"https://orcid.org/0000-0002-3994-010X"},"institutions":[{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Layth Alkhani","raw_affiliation_strings":["Department of Bioengineering, Stanford University , Stanford, CA, United States","Department of Chemistry, Stanford University , Stanford, CA, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Bioengineering, Stanford University , Stanford, CA, United States","institution_ids":["https://openalex.org/I97018004"]},{"raw_affiliation_string":"Department of Chemistry, Stanford University , Stanford, CA, United States","institution_ids":["https://openalex.org/I97018004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100744876","display_name":"Susan Lee","orcid":"https://orcid.org/0000-0002-2266-8576"},"institutions":[{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Susan Lee","raw_affiliation_strings":["Department of Computer Science, Stanford University , Stanford, CA, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Stanford University , Stanford, CA, United States","institution_ids":["https://openalex.org/I97018004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5019448089","display_name":"Nathan Mohit","orcid":null},"institutions":[{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Nathan Mohit","raw_affiliation_strings":["Department of Computer Science, Stanford University , Stanford, CA, United States","Department of Human Biology, Stanford University , Stanford, CA, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Stanford University , Stanford, CA, United States","institution_ids":["https://openalex.org/I97018004"]},{"raw_affiliation_string":"Department of Human Biology, Stanford University , Stanford, CA, United States","institution_ids":["https://openalex.org/I97018004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047616311","display_name":"Noel Seo","orcid":null},"institutions":[{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Noel Seo","raw_affiliation_strings":["Department of Sociology, Stanford University , Stanford, CA, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Sociology, Stanford University , Stanford, CA, United States","institution_ids":["https://openalex.org/I97018004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5090338420","display_name":"Nicholas Macedo","orcid":null},"institutions":[{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Nicholas Macedo","raw_affiliation_strings":["Department of Biology, Stanford University , Stanford, CA, United States","Department of Radiology, Stanford University School of Medicine , Stanford, CA, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biology, Stanford University , Stanford, CA, United States","institution_ids":["https://openalex.org/I97018004"]},{"raw_affiliation_string":"Department of Radiology, Stanford University School of Medicine , Stanford, CA, United States","institution_ids":["https://openalex.org/I97018004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084815985","display_name":"Winson Cheng","orcid":null},"institutions":[{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Winson Cheng","raw_affiliation_strings":["Department of Chemistry, Stanford University , Stanford, CA, United States","Department of Computer Science, Stanford University , Stanford, CA, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Chemistry, Stanford University , Stanford, CA, United States","institution_ids":["https://openalex.org/I97018004"]},{"raw_affiliation_string":"Department of Computer Science, Stanford University , Stanford, CA, United States","institution_ids":["https://openalex.org/I97018004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016156250","display_name":"Charles Y. Liu","orcid":"https://orcid.org/0000-0001-6423-8577"},"institutions":[{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Charles Liu","raw_affiliation_strings":["Department of Surgery, Stanford University School of Medicine , Stanford, CA, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Surgery, Stanford University School of Medicine , Stanford, CA, United States","institution_ids":["https://openalex.org/I97018004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101894426","display_name":"Reena Thomas","orcid":"https://orcid.org/0000-0002-2695-3462"},"institutions":[{"id":"https://openalex.org/I4210105015","display_name":"Stanford Health Care","ror":"https://ror.org/019wqcg20","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210105015"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Reena Thomas","raw_affiliation_strings":["Department of Neurology and Neurological Sciences, Stanford Health Care , Stanford, CA, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Neurology and Neurological Sciences, Stanford Health Care , Stanford, CA, United States","institution_ids":["https://openalex.org/I4210105015"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046725885","display_name":"Jonathan H. Chen","orcid":"https://orcid.org/0000-0002-4387-8740"},"institutions":[{"id":"https://openalex.org/I4210137306","display_name":"Stanford Medicine","ror":"https://ror.org/03mtd9a03","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210137306","https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jonathan H Chen","raw_affiliation_strings":["Clinical Excellence Research Center , Stanford, CA, United States","Department of Medicine , Stanford, CA, United States","Division of Hospital Medicine , Stanford, CA, United States","Stanford Center for Biomedical Informatics Research , Stanford, CA, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Clinical Excellence Research Center , Stanford, CA, United States","institution_ids":[]},{"raw_affiliation_string":"Department of Medicine , Stanford, CA, United States","institution_ids":["https://openalex.org/I4210137306"]},{"raw_affiliation_string":"Division of Hospital Medicine , Stanford, CA, United States","institution_ids":["https://openalex.org/I4210137306"]},{"raw_affiliation_string":"Stanford Center for Biomedical Informatics Research , Stanford, CA, United States","institution_ids":["https://openalex.org/I4210137306"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5078274543","display_name":"Olivier Gevaert","orcid":"https://orcid.org/0000-0002-9965-5466"},"institutions":[{"id":"https://openalex.org/I4210137306","display_name":"Stanford Medicine","ror":"https://ror.org/03mtd9a03","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210137306","https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Olivier Gevaert","raw_affiliation_strings":["Department of Medicine , Stanford, CA, United States","Stanford Center for Biomedical Informatics Research , Stanford, CA, United States"],"raw_orcid":"https://orcid.org/0000-0002-9965-5466","affiliations":[{"raw_affiliation_string":"Department of Medicine , Stanford, CA, United States","institution_ids":["https://openalex.org/I4210137306"]},{"raw_affiliation_string":"Stanford Center for Biomedical Informatics Research , Stanford, CA, United States","institution_ids":["https://openalex.org/I4210137306"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":20,"corresponding_author_ids":["https://openalex.org/A5079965457"],"corresponding_institution_ids":["https://openalex.org/I1303377637","https://openalex.org/I97018004"],"apc_list":{"value":3967,"currency":"USD","value_usd":3967},"apc_paid":{"value":3967,"currency":"USD","value_usd":3967},"fwci":2.2059,"has_fulltext":true,"cited_by_count":13,"citation_normalized_percentile":{"value":0.9024525,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":96,"max":100},"biblio":{"volume":"31","issue":"1","first_page":"188","last_page":"197"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":0.5224999785423279,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":0.5224999785423279,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11652","display_name":"Imbalanced Data Classification Techniques","score":0.029899999499320984,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T14374","display_name":"Statistical Methods in Epidemiology","score":0.023099999874830246,"subfield":{"id":"https://openalex.org/subfields/2613","display_name":"Statistics and Probability"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/random-forest","display_name":"Random forest","score":0.7298789024353027},{"id":"https://openalex.org/keywords/false-positive-paradox","display_name":"False positive paradox","score":0.668756902217865},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.6629534959793091},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6437757611274719},{"id":"https://openalex.org/keywords/logistic-regression","display_name":"Logistic regression","score":0.5900831818580627},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.5783109664916992},{"id":"https://openalex.org/keywords/classifier","display_name":"Classifier (UML)","score":0.549333930015564},{"id":"https://openalex.org/keywords/support-vector-machine","display_name":"Support vector machine","score":0.5067101120948792},{"id":"https://openalex.org/keywords/proxy","display_name":"Proxy (statistics)","score":0.437131404876709},{"id":"https://openalex.org/keywords/decision-tree","display_name":"Decision tree","score":0.4182566702365875}],"concepts":[{"id":"https://openalex.org/C169258074","wikidata":"https://www.wikidata.org/wiki/Q245748","display_name":"Random forest","level":2,"score":0.7298789024353027},{"id":"https://openalex.org/C64869954","wikidata":"https://www.wikidata.org/wiki/Q1859747","display_name":"False positive paradox","level":2,"score":0.668756902217865},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6629534959793091},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6437757611274719},{"id":"https://openalex.org/C151956035","wikidata":"https://www.wikidata.org/wiki/Q1132755","display_name":"Logistic regression","level":2,"score":0.5900831818580627},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.5783109664916992},{"id":"https://openalex.org/C95623464","wikidata":"https://www.wikidata.org/wiki/Q1096149","display_name":"Classifier (UML)","level":2,"score":0.549333930015564},{"id":"https://openalex.org/C12267149","wikidata":"https://www.wikidata.org/wiki/Q282453","display_name":"Support vector machine","level":2,"score":0.5067101120948792},{"id":"https://openalex.org/C2780148112","wikidata":"https://www.wikidata.org/wiki/Q1432581","display_name":"Proxy (statistics)","level":2,"score":0.437131404876709},{"id":"https://openalex.org/C84525736","wikidata":"https://www.wikidata.org/wiki/Q831366","display_name":"Decision tree","level":2,"score":0.4182566702365875}],"mesh":[{"descriptor_ui":"D000230","descriptor_name":"Adenocarcinoma","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000230","descriptor_name":"Adenocarcinoma","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000230","descriptor_name":"Adenocarcinoma","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000230","descriptor_name":"Adenocarcinoma","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000230","descriptor_name":"Adenocarcinoma","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016015","descriptor_name":"Logistic Models","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016015","descriptor_name":"Logistic Models","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016015","descriptor_name":"Logistic Models","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016015","descriptor_name":"Logistic Models","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016015","descriptor_name":"Logistic Models","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D060388","descriptor_name":"Support Vector Machine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D060388","descriptor_name":"Support Vector Machine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D060388","descriptor_name":"Support Vector Machine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D060388","descriptor_name":"Support Vector Machine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D060388","descriptor_name":"Support Vector Machine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/jamia/ocad182","is_oa":true,"landing_page_url":"https://doi.org/10.1093/jamia/ocad182","pdf_url":"https://academic.oup.com/jamia/advance-article-pdf/doi/10.1093/jamia/ocad182/51791317/ocad182.pdf","source":{"id":"https://openalex.org/S129839026","display_name":"Journal of the American Medical Informatics Association","issn_l":"1067-5027","issn":["1067-5027","1527-974X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association","raw_type":"journal-article"},{"id":"pmid:37769323","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/37769323","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association : JAMIA","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:10746316","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10746316","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10746316/pdf/ocad182.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Am Med Inform Assoc","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/jamia/ocad182","is_oa":true,"landing_page_url":"https://doi.org/10.1093/jamia/ocad182","pdf_url":"https://academic.oup.com/jamia/advance-article-pdf/doi/10.1093/jamia/ocad182/51791317/ocad182.pdf","source":{"id":"https://openalex.org/S129839026","display_name":"Journal of the American Medical Informatics Association","issn_l":"1067-5027","issn":["1067-5027","1527-974X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.5699999928474426,"id":"https://metadata.un.org/sdg/15","display_name":"Life in Land"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4387117651.pdf"},"referenced_works_count":23,"referenced_works":["https://openalex.org/W115293911","https://openalex.org/W1976716107","https://openalex.org/W1997057722","https://openalex.org/W2065521691","https://openalex.org/W2139517939","https://openalex.org/W2226880313","https://openalex.org/W2324745248","https://openalex.org/W2342049278","https://openalex.org/W2396881363","https://openalex.org/W2769041395","https://openalex.org/W2789244308","https://openalex.org/W2915045810","https://openalex.org/W2959716049","https://openalex.org/W2976272453","https://openalex.org/W2993873509","https://openalex.org/W3040734236","https://openalex.org/W3087495852","https://openalex.org/W3118929067","https://openalex.org/W3164026672","https://openalex.org/W3180521534","https://openalex.org/W3211282104","https://openalex.org/W4309650827","https://openalex.org/W6604735148"],"related_works":["https://openalex.org/W1557094818","https://openalex.org/W3193043704","https://openalex.org/W4386259002","https://openalex.org/W1546989560","https://openalex.org/W2889302474","https://openalex.org/W4366990902","https://openalex.org/W4317732970","https://openalex.org/W4388550696","https://openalex.org/W4321636153","https://openalex.org/W4313289487"],"abstract_inverted_index":{"OBJECTIVE:":[0],"While":[1],"there":[2],"are":[3],"currently":[4],"approaches":[5],"to":[6,31,42,73,141,155,182,187,191,195,200,204,211,246],"handle":[7],"unstructured":[8,55,233],"clinical":[9,56,78,234],"data,":[10],"such":[11],"as":[12],"manual":[13],"abstraction":[14],"and":[15,26,52,95,102,123,126,145,167,197,208,225],"structured":[16,212,226],"proxy":[17,213,227],"variables,":[18],"these":[19],"methods":[20],"may":[21],"be":[22,240],"time-consuming,":[23],"not":[24],"scalable,":[25],"imprecise.":[27],"This":[28],"article":[29],"aims":[30],"determine":[32],"whether":[33],"selective":[34,64,134,173,219],"prediction,":[35,47],"which":[36,180],"gives":[37],"a":[38,46,205],"model":[39],"the":[40,50,114,146,165],"option":[41],"abstain":[43],"from":[44,77,139,153,232],"generating":[45],"can":[48],"improve":[49],"accuracy":[51],"efficiency":[53],"of":[54,110,116,143,162,178],"data":[57,231],"abstraction.":[58],"MATERIALS":[59],"AND":[60],"METHODS:":[61],"We":[62,112,216],"trained":[63],"classifiers":[65,135,158,220,224],"(logistic":[66],"regression,":[67],"random":[68],"forest,":[69],"support":[70],"vector":[71],"machine)":[72],"extract":[74],"5":[75],"variables":[76,228],"notes:":[79],"depression":[80,133],"(n":[81],"=":[82,87,93,100,108],"1563),":[83],"glioblastoma":[84],"(GBM,":[85],"n":[86,92,99,107],"659),":[88],"rectal":[89],"adenocarcinoma":[90],"(DRA,":[91],"601),":[94],"abdominoperineal":[96],"resection":[97,105],"(APR,":[98],"601)":[101,109],"low":[103],"anterior":[104],"(LAR,":[106],"adenocarcinoma.":[111],"varied":[113],"cost":[115,151],"false":[117,120],"positives":[118],"(FP),":[119],"negatives":[121],"(FN),":[122],"abstained":[124,136,159,175],"notes":[125,163],"measured":[127],"total":[128,149],"misclassification":[129,150],"cost.":[130],"RESULTS:":[131],"The":[132,171],"on":[137,160,176],"anywhere":[138],"0%":[140],"97%":[142],"notes,":[144,179],"change":[147],"in":[148,184],"ranged":[152],"-58%":[154],"9%.":[156],"Selective":[157,237],"5%-43%":[161],"across":[164],"GBM":[166,172],"colorectal":[168],"cancer":[169],"models.":[170],"classifier":[174,207],"43%":[177],"led":[181],"improvements":[183],"sensitivity":[185],"(0.94":[186],"0.96),":[188,192],"specificity":[189],"(0.79":[190],"PPV":[193],"(0.89":[194],"0.98),":[196],"NPV":[198],"(0.88":[199],"0.91)":[201],"when":[202,209,242],"compared":[203,210],"non-selective":[206,223],"variables.":[214],"DISCUSSION:":[215],"showed":[217],"that":[218],"outperformed":[221],"both":[222],"for":[229],"extracting":[230],"notes.":[235],"CONCLUSION:":[236],"prediction":[238],"should":[239],"considered":[241],"abstaining":[243],"is":[244],"preferable":[245],"making":[247],"an":[248],"incorrect":[249],"prediction.":[250]},"counts_by_year":[{"year":2026,"cited_by_count":4},{"year":2025,"cited_by_count":6},{"year":2024,"cited_by_count":3}],"updated_date":"2026-04-29T09:16:38.111599","created_date":"2025-10-10T00:00:00"}
