{"id":"https://openalex.org/W3215732226","doi":"https://doi.org/10.1093/jamia/ocab264","title":"The Mass General Brigham Biobank Portal: an i2b2-based data repository linking disparate and high-dimensional patient data to support multimodal analytics","display_name":"The Mass General Brigham Biobank Portal: an i2b2-based data repository linking disparate and high-dimensional patient data to support multimodal analytics","publication_year":2021,"publication_date":"2021-11-16","ids":{"openalex":"https://openalex.org/W3215732226","doi":"https://doi.org/10.1093/jamia/ocab264","mag":"3215732226","pmid":"https://pubmed.ncbi.nlm.nih.gov/34849976"},"language":"en","primary_location":{"id":"doi:10.1093/jamia/ocab264","is_oa":true,"landing_page_url":"https://doi.org/10.1093/jamia/ocab264","pdf_url":"https://academic.oup.com/jamia/article-pdf/29/4/643/42897411/ocab264.pdf","source":{"id":"https://openalex.org/S129839026","display_name":"Journal of the American Medical Informatics Association","issn_l":"1067-5027","issn":["1067-5027","1527-974X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/jamia/article-pdf/29/4/643/42897411/ocab264.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5055125808","display_name":"V\u00edctor M. Castro","orcid":"https://orcid.org/0000-0001-7390-6354"},"institutions":[{"id":"https://openalex.org/I1281504905","display_name":"Political Research Associates","ror":"https://ror.org/00ecnfg66","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1281504905"]},{"id":"https://openalex.org/I48633490","display_name":"Mass General Brigham","ror":"https://ror.org/04py2rh25","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I48633490"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Victor M Castro","raw_affiliation_strings":["Research Information Science and Computing, Mass General Brigham, Somerville, Massachusetts, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Research Information Science and Computing, Mass General Brigham, Somerville, Massachusetts, USA","institution_ids":["https://openalex.org/I1281504905","https://openalex.org/I48633490"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087506527","display_name":"Vivian S. Gainer","orcid":null},"institutions":[{"id":"https://openalex.org/I1281504905","display_name":"Political Research Associates","ror":"https://ror.org/00ecnfg66","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1281504905"]},{"id":"https://openalex.org/I48633490","display_name":"Mass General Brigham","ror":"https://ror.org/04py2rh25","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I48633490"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Vivian Gainer","raw_affiliation_strings":["Research Information Science and Computing, Mass General Brigham, Somerville, Massachusetts, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Research Information Science and Computing, Mass General Brigham, Somerville, Massachusetts, USA","institution_ids":["https://openalex.org/I1281504905","https://openalex.org/I48633490"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006304617","display_name":"Nich Wattanasin","orcid":null},"institutions":[{"id":"https://openalex.org/I1281504905","display_name":"Political Research Associates","ror":"https://ror.org/00ecnfg66","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1281504905"]},{"id":"https://openalex.org/I48633490","display_name":"Mass General Brigham","ror":"https://ror.org/04py2rh25","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I48633490"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Nich Wattanasin","raw_affiliation_strings":["Research Information Science and Computing, Mass General Brigham, Somerville, Massachusetts, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Research Information Science and Computing, Mass General Brigham, Somerville, Massachusetts, USA","institution_ids":["https://openalex.org/I1281504905","https://openalex.org/I48633490"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055429896","display_name":"Barbara Benoit","orcid":null},"institutions":[{"id":"https://openalex.org/I1281504905","display_name":"Political Research Associates","ror":"https://ror.org/00ecnfg66","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1281504905"]},{"id":"https://openalex.org/I48633490","display_name":"Mass General Brigham","ror":"https://ror.org/04py2rh25","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I48633490"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Barbara Benoit","raw_affiliation_strings":["Research Information Science and Computing, Mass General Brigham, Somerville, Massachusetts, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Research Information Science and Computing, Mass General Brigham, Somerville, Massachusetts, USA","institution_ids":["https://openalex.org/I1281504905","https://openalex.org/I48633490"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040074226","display_name":"Andrew Cagan","orcid":null},"institutions":[{"id":"https://openalex.org/I1281504905","display_name":"Political Research Associates","ror":"https://ror.org/00ecnfg66","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1281504905"]},{"id":"https://openalex.org/I48633490","display_name":"Mass General Brigham","ror":"https://ror.org/04py2rh25","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I48633490"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Andrew Cagan","raw_affiliation_strings":["Research Information Science and Computing, Mass General Brigham, Somerville, Massachusetts, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Research Information Science and Computing, Mass General Brigham, Somerville, Massachusetts, USA","institution_ids":["https://openalex.org/I1281504905","https://openalex.org/I48633490"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102181658","display_name":"Bhaswati Ghosh","orcid":null},"institutions":[{"id":"https://openalex.org/I1281504905","display_name":"Political Research Associates","ror":"https://ror.org/00ecnfg66","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1281504905"]},{"id":"https://openalex.org/I48633490","display_name":"Mass General Brigham","ror":"https://ror.org/04py2rh25","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I48633490"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Bhaswati Ghosh","raw_affiliation_strings":["Research Information Science and Computing, Mass General Brigham, Somerville, Massachusetts, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Research Information Science and Computing, Mass General Brigham, Somerville, Massachusetts, USA","institution_ids":["https://openalex.org/I1281504905","https://openalex.org/I48633490"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5078297242","display_name":"Sergey Goryachev","orcid":null},"institutions":[{"id":"https://openalex.org/I1281504905","display_name":"Political Research Associates","ror":"https://ror.org/00ecnfg66","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1281504905"]},{"id":"https://openalex.org/I48633490","display_name":"Mass General Brigham","ror":"https://ror.org/04py2rh25","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I48633490"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sergey Goryachev","raw_affiliation_strings":["Research Information Science and Computing, Mass General Brigham, Somerville, Massachusetts, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Research Information Science and Computing, Mass General Brigham, Somerville, Massachusetts, USA","institution_ids":["https://openalex.org/I1281504905","https://openalex.org/I48633490"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062414824","display_name":"Reeta Metta","orcid":null},"institutions":[{"id":"https://openalex.org/I1281504905","display_name":"Political Research Associates","ror":"https://ror.org/00ecnfg66","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1281504905"]},{"id":"https://openalex.org/I48633490","display_name":"Mass General Brigham","ror":"https://ror.org/04py2rh25","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I48633490"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Reeta Metta","raw_affiliation_strings":["Research Information Science and Computing, Mass General Brigham, Somerville, Massachusetts, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Research Information Science and Computing, Mass General Brigham, Somerville, Massachusetts, USA","institution_ids":["https://openalex.org/I1281504905","https://openalex.org/I48633490"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040463797","display_name":"Heekyong Park","orcid":"https://orcid.org/0000-0001-9481-3288"},"institutions":[{"id":"https://openalex.org/I1281504905","display_name":"Political Research Associates","ror":"https://ror.org/00ecnfg66","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1281504905"]},{"id":"https://openalex.org/I48633490","display_name":"Mass General Brigham","ror":"https://ror.org/04py2rh25","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I48633490"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Heekyong Park","raw_affiliation_strings":["Research Information Science and Computing, Mass General Brigham, Somerville, Massachusetts, USA"],"raw_orcid":"https://orcid.org/0000-0001-9481-3288","affiliations":[{"raw_affiliation_string":"Research Information Science and Computing, Mass General Brigham, Somerville, Massachusetts, USA","institution_ids":["https://openalex.org/I1281504905","https://openalex.org/I48633490"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100652803","display_name":"David Wang","orcid":"https://orcid.org/0000-0002-0294-7738"},"institutions":[{"id":"https://openalex.org/I1281504905","display_name":"Political Research Associates","ror":"https://ror.org/00ecnfg66","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1281504905"]},{"id":"https://openalex.org/I48633490","display_name":"Mass General Brigham","ror":"https://ror.org/04py2rh25","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I48633490"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"David Wang","raw_affiliation_strings":["Research Information Science and Computing, Mass General Brigham, Somerville, Massachusetts, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Research Information Science and Computing, Mass General Brigham, Somerville, Massachusetts, USA","institution_ids":["https://openalex.org/I1281504905","https://openalex.org/I48633490"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031226342","display_name":"Michael Mendis","orcid":null},"institutions":[{"id":"https://openalex.org/I1281504905","display_name":"Political Research Associates","ror":"https://ror.org/00ecnfg66","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1281504905"]},{"id":"https://openalex.org/I48633490","display_name":"Mass General Brigham","ror":"https://ror.org/04py2rh25","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I48633490"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Michael Mendis","raw_affiliation_strings":["Research Information Science and Computing, Mass General Brigham, Somerville, Massachusetts, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Research Information Science and Computing, Mass General Brigham, Somerville, Massachusetts, USA","institution_ids":["https://openalex.org/I1281504905","https://openalex.org/I48633490"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045826016","display_name":"Martin Rees","orcid":null},"institutions":[{"id":"https://openalex.org/I1281504905","display_name":"Political Research Associates","ror":"https://ror.org/00ecnfg66","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1281504905"]},{"id":"https://openalex.org/I48633490","display_name":"Mass General Brigham","ror":"https://ror.org/04py2rh25","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I48633490"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Martin Rees","raw_affiliation_strings":["Research Information Science and Computing, Mass General Brigham, Somerville, Massachusetts, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Research Information Science and Computing, Mass General Brigham, Somerville, Massachusetts, USA","institution_ids":["https://openalex.org/I1281504905","https://openalex.org/I48633490"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065649437","display_name":"Christopher Herrick","orcid":null},"institutions":[{"id":"https://openalex.org/I1281504905","display_name":"Political Research Associates","ror":"https://ror.org/00ecnfg66","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1281504905"]},{"id":"https://openalex.org/I48633490","display_name":"Mass General Brigham","ror":"https://ror.org/04py2rh25","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I48633490"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Christopher Herrick","raw_affiliation_strings":["Research Information Science and Computing, Mass General Brigham, Somerville, Massachusetts, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Research Information Science and Computing, Mass General Brigham, Somerville, Massachusetts, USA","institution_ids":["https://openalex.org/I1281504905","https://openalex.org/I48633490"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5087242254","display_name":"Shawn N. Murphy","orcid":null},"institutions":[{"id":"https://openalex.org/I1281504905","display_name":"Political Research Associates","ror":"https://ror.org/00ecnfg66","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1281504905"]},{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]},{"id":"https://openalex.org/I4210087915","display_name":"Massachusetts General Hospital","ror":"https://ror.org/002pd6e78","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210087915","https://openalex.org/I48633490"]},{"id":"https://openalex.org/I48633490","display_name":"Mass General Brigham","ror":"https://ror.org/04py2rh25","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I48633490"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Shawn N Murphy","raw_affiliation_strings":["Department of Neurology, Massachusetts General Hospital and Harvard Medical School, Boston, Massachusetts, USA","Research Information Science and Computing, Mass General Brigham, Somerville, Massachusetts, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Neurology, Massachusetts General Hospital and Harvard Medical School, Boston, Massachusetts, USA","institution_ids":["https://openalex.org/I4210087915","https://openalex.org/I136199984"]},{"raw_affiliation_string":"Research Information Science and Computing, Mass General Brigham, Somerville, Massachusetts, USA","institution_ids":["https://openalex.org/I1281504905","https://openalex.org/I48633490"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":14,"corresponding_author_ids":["https://openalex.org/A5055125808"],"corresponding_institution_ids":["https://openalex.org/I1281504905","https://openalex.org/I48633490"],"apc_list":{"value":3967,"currency":"USD","value_usd":3967},"apc_paid":{"value":3967,"currency":"USD","value_usd":3967},"fwci":7.2766,"has_fulltext":false,"cited_by_count":67,"citation_normalized_percentile":{"value":0.97744265,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":99,"max":100},"biblio":{"volume":"29","issue":"4","first_page":"643","last_page":"651"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11642","display_name":"Genomics and Rare Diseases","score":0.4950000047683716,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11642","display_name":"Genomics and Rare Diseases","score":0.4950000047683716,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10261","display_name":"Genetic Associations and Epidemiology","score":0.19840000569820404,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.0982000008225441,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biobank","display_name":"Biobank","score":0.9255547523498535},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6002169847488403},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.592364490032196},{"id":"https://openalex.org/keywords/information-repository","display_name":"Information repository","score":0.56004399061203},{"id":"https://openalex.org/keywords/informatics","display_name":"Informatics","score":0.5452956557273865},{"id":"https://openalex.org/keywords/health-informatics","display_name":"Health informatics","score":0.5273082256317139},{"id":"https://openalex.org/keywords/interoperability","display_name":"Interoperability","score":0.5241011381149292},{"id":"https://openalex.org/keywords/health-informatics-tools","display_name":"Health informatics tools","score":0.48504775762557983},{"id":"https://openalex.org/keywords/metadata","display_name":"Metadata","score":0.4692665934562683},{"id":"https://openalex.org/keywords/data-curation","display_name":"Data curation","score":0.43822917342185974},{"id":"https://openalex.org/keywords/analytics","display_name":"Analytics","score":0.4228118360042572},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.33671092987060547},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.32044076919555664},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.3137933909893036},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.2771584093570709},{"id":"https://openalex.org/keywords/computer-data-storage","display_name":"Computer data storage","score":0.16716834902763367},{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.12002843618392944},{"id":"https://openalex.org/keywords/public-health","display_name":"Public health","score":0.1090860366821289},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.10245746374130249},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.10203754901885986}],"concepts":[{"id":"https://openalex.org/C116567970","wikidata":"https://www.wikidata.org/wiki/Q864217","display_name":"Biobank","level":2,"score":0.9255547523498535},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6002169847488403},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.592364490032196},{"id":"https://openalex.org/C3102742","wikidata":"https://www.wikidata.org/wiki/Q6031177","display_name":"Information repository","level":3,"score":0.56004399061203},{"id":"https://openalex.org/C191630685","wikidata":"https://www.wikidata.org/wiki/Q4027615","display_name":"Informatics","level":2,"score":0.5452956557273865},{"id":"https://openalex.org/C145642194","wikidata":"https://www.wikidata.org/wiki/Q870895","display_name":"Health informatics","level":3,"score":0.5273082256317139},{"id":"https://openalex.org/C20136886","wikidata":"https://www.wikidata.org/wiki/Q749647","display_name":"Interoperability","level":2,"score":0.5241011381149292},{"id":"https://openalex.org/C167785021","wikidata":"https://www.wikidata.org/wiki/Q5691083","display_name":"Health informatics tools","level":3,"score":0.48504775762557983},{"id":"https://openalex.org/C93518851","wikidata":"https://www.wikidata.org/wiki/Q180160","display_name":"Metadata","level":2,"score":0.4692665934562683},{"id":"https://openalex.org/C91632574","wikidata":"https://www.wikidata.org/wiki/Q15088675","display_name":"Data curation","level":2,"score":0.43822917342185974},{"id":"https://openalex.org/C79158427","wikidata":"https://www.wikidata.org/wiki/Q485396","display_name":"Analytics","level":2,"score":0.4228118360042572},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.33671092987060547},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.32044076919555664},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.3137933909893036},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.2771584093570709},{"id":"https://openalex.org/C194739806","wikidata":"https://www.wikidata.org/wiki/Q66221","display_name":"Computer data storage","level":2,"score":0.16716834902763367},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.12002843618392944},{"id":"https://openalex.org/C138816342","wikidata":"https://www.wikidata.org/wiki/Q189603","display_name":"Public health","level":2,"score":0.1090860366821289},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.10245746374130249},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.10203754901885986},{"id":"https://openalex.org/C119599485","wikidata":"https://www.wikidata.org/wiki/Q43035","display_name":"Electrical engineering","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D003625","descriptor_name":"Data Collection","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003625","descriptor_name":"Data Collection","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003625","descriptor_name":"Data Collection","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003625","descriptor_name":"Data Collection","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018070","descriptor_name":"Biological Specimen Banks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018070","descriptor_name":"Biological Specimen Banks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018070","descriptor_name":"Biological Specimen Banks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018070","descriptor_name":"Biological Specimen Banks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D048088","descriptor_name":"Informatics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D048088","descriptor_name":"Informatics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D048088","descriptor_name":"Informatics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D048088","descriptor_name":"Informatics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/jamia/ocab264","is_oa":true,"landing_page_url":"https://doi.org/10.1093/jamia/ocab264","pdf_url":"https://academic.oup.com/jamia/article-pdf/29/4/643/42897411/ocab264.pdf","source":{"id":"https://openalex.org/S129839026","display_name":"Journal of the American Medical Informatics Association","issn_l":"1067-5027","issn":["1067-5027","1527-974X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association","raw_type":"journal-article"},{"id":"pmid:34849976","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34849976","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association : JAMIA","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:8922162","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8922162","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Am Med Inform Assoc","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/jamia/ocab264","is_oa":true,"landing_page_url":"https://doi.org/10.1093/jamia/ocab264","pdf_url":"https://academic.oup.com/jamia/article-pdf/29/4/643/42897411/ocab264.pdf","source":{"id":"https://openalex.org/S129839026","display_name":"Journal of the American Medical Informatics Association","issn_l":"1067-5027","issn":["1067-5027","1527-974X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.4399999976158142,"id":"https://metadata.un.org/sdg/17","display_name":"Partnerships for the goals"}],"awards":[{"id":"https://openalex.org/G1555237813","display_name":null,"funder_award_id":"U01HG008685-05S1","funder_id":"https://openalex.org/F4320337348","funder_display_name":"National Human Genome Research Institute"},{"id":"https://openalex.org/G934628243","display_name":null,"funder_award_id":"1OT2HL161841-01","funder_id":"https://openalex.org/F4320337338","funder_display_name":"National Heart, Lung, and Blood Institute"},{"id":"https://openalex.org/G947657586","display_name":null,"funder_award_id":"R01-HG009174","funder_id":"https://openalex.org/F4320337348","funder_display_name":"National Human Genome Research Institute"}],"funders":[{"id":"https://openalex.org/F4320337338","display_name":"National Heart, Lung, and Blood Institute","ror":"https://ror.org/012pb6c26"},{"id":"https://openalex.org/F4320337348","display_name":"National Human Genome Research Institute","ror":"https://ror.org/00baak391"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3215732226.pdf","grobid_xml":"https://content.openalex.org/works/W3215732226.grobid-xml"},"referenced_works_count":42,"referenced_works":["https://openalex.org/W1126991912","https://openalex.org/W1495859460","https://openalex.org/W1911952697","https://openalex.org/W2034626816","https://openalex.org/W2048622875","https://openalex.org/W2064337796","https://openalex.org/W2082091097","https://openalex.org/W2093274439","https://openalex.org/W2104608657","https://openalex.org/W2109019042","https://openalex.org/W2121382432","https://openalex.org/W2126130217","https://openalex.org/W2234524676","https://openalex.org/W2280293740","https://openalex.org/W2302501749","https://openalex.org/W2404369708","https://openalex.org/W2410127521","https://openalex.org/W2773787581","https://openalex.org/W2790713217","https://openalex.org/W2887567374","https://openalex.org/W2895486342","https://openalex.org/W2967343033","https://openalex.org/W2971381437","https://openalex.org/W2973113902","https://openalex.org/W2979758753","https://openalex.org/W2991319174","https://openalex.org/W2991379615","https://openalex.org/W3009622319","https://openalex.org/W3087495852","https://openalex.org/W3108350837","https://openalex.org/W3136460817","https://openalex.org/W3169938439","https://openalex.org/W3190244918","https://openalex.org/W3204955386","https://openalex.org/W3206941164","https://openalex.org/W3211201308","https://openalex.org/W4200452052","https://openalex.org/W4205170775","https://openalex.org/W4211013682","https://openalex.org/W6627291559","https://openalex.org/W6713634263","https://openalex.org/W6800062924"],"related_works":["https://openalex.org/W2152243665","https://openalex.org/W4238975963","https://openalex.org/W2017123803","https://openalex.org/W2320705913","https://openalex.org/W3170425103","https://openalex.org/W2974071312","https://openalex.org/W2591965433","https://openalex.org/W2005011662","https://openalex.org/W2955949264","https://openalex.org/W4311292698"],"abstract_inverted_index":{"OBJECTIVE:":[0],"Integrating":[1,31],"and":[2,19,33,54,58,79,122,153,176,197,217,225,239,247],"harmonizing":[3],"disparate":[4],"patient":[5,151,219],"data":[6,11,46,51,56,63,72,121,174,179,200,220,242],"sources":[7,57,175],"into":[8],"one":[9],"consolidated":[10],"portal":[12,73],"enables":[13],"researchers":[14,165],"to":[15,37,68,166,184,195,207,235],"conduct":[16,167],"analysis":[17,157],"efficiently":[18],"effectively.":[20],"MATERIALS":[21],"AND":[22],"METHODS:":[23],"We":[24],"describe":[25],"an":[26],"implementation":[27],"of":[28,87,211],"Informatics":[29],"for":[30,83,186],"Biology":[32],"the":[34,39,98,112,241],"Bedside":[35],"(i2b2)":[36],"create":[38],"Mass":[40],"General":[41],"Brigham":[42],"(MGB)":[43],"Biobank":[44,161,215],"Portal":[45,162,216],"repository.":[47],"The":[48,62,160,214],"repository":[49],"integrates":[50],"from":[52],"primary":[53],"curated":[55],"is":[59],"updated":[60],"weekly.":[61],"are":[64,91,134,141,181,244],"made":[65],"readily":[66],"available":[67],"investigators":[69,145],"in":[70,97],"a":[71,105,137,208],"where":[74],"they":[75,202],"can":[76],"easily":[77],"construct":[78],"export":[80],"customized":[81],"datasets":[82,227],"analysis.":[84],"RESULTS:":[85],"As":[86],"July":[88],"2021,":[89],"there":[90],"125":[92],"645":[93],"consented":[94],"patients":[95],"enrolled":[96],"MGB":[99],"Biobank.":[100],"88":[101],"527":[102],"(70.5%)":[103],"have":[104,110,119,126,147],"biospecimen,":[106],"55":[107],"121":[108],"(43.9%)":[109],"completed":[111],"health":[113],"information":[114],"survey,":[115],"43":[116],"552":[117],"(34.7%)":[118],"genomic":[120],"124":[123],"760":[124],"(99.3%)":[125],"EHR":[127],"data.":[128],"Twenty":[129],"machine":[130],"learning":[131],"computed":[132],"phenotypes":[133],"calculated":[135],"on":[136],"weekly":[138],"basis.":[139],"There":[140],"currently":[142],"1220":[143],"active":[144],"who":[146],"run":[148],"58":[149],"793":[150],"queries":[152],"exported":[154],"10":[155],"257":[156],"files.":[158],"DISCUSSION:":[159],"allows":[163],"noninformatics":[164],"study":[168],"feasibility":[169],"by":[170],"querying":[171],"across":[172],"many":[173],"then":[177],"extract":[178],"that":[180,222],"most":[182],"useful":[183],"them":[185],"clinical":[187],"studies.":[188],"While":[189],"institutions":[190],"require":[191],"substantial":[192],"informatics":[193],"resources":[194],"establish":[196],"maintain":[198],"integrated":[199],"repositories,":[201],"yield":[203],"significant":[204],"research":[205,230],"value":[206],"wide":[209],"range":[210],"investigators.":[212],"CONCLUSION:":[213],"other":[218],"portals":[221],"integrate":[223],"complex":[224],"simple":[226],"enable":[228],"diverse":[229],"use":[231],"cases.":[232],"i2b2":[233],"tools":[234],"implement":[236],"these":[237],"registries":[238],"make":[240],"interoperable":[243],"open":[245],"source":[246],"freely":[248],"available.":[249]},"counts_by_year":[{"year":2026,"cited_by_count":6},{"year":2025,"cited_by_count":17},{"year":2024,"cited_by_count":18},{"year":2023,"cited_by_count":18},{"year":2022,"cited_by_count":8}],"updated_date":"2026-04-29T09:16:38.111599","created_date":"2025-10-10T00:00:00"}
