{"id":"https://openalex.org/W3088349482","doi":"https://doi.org/10.1093/jamia/ocab153","title":"Corrigendum to: The 2019 National Natural language processing (NLP) Clinical Challenges (n2c2)/Open Health NLP (OHNLP) shared task on clinical concept normalization for clinical records","display_name":"Corrigendum to: The 2019 National Natural language processing (NLP) Clinical Challenges (n2c2)/Open Health NLP (OHNLP) shared task on clinical concept normalization for clinical records","publication_year":2021,"publication_date":"2021-08-17","ids":{"openalex":"https://openalex.org/W3088349482","doi":"https://doi.org/10.1093/jamia/ocab153","mag":"3088349482","pmid":"https://pubmed.ncbi.nlm.nih.gov/34401908"},"language":"en","primary_location":{"id":"doi:10.1093/jamia/ocab153","is_oa":true,"landing_page_url":"https://doi.org/10.1093/jamia/ocab153","pdf_url":"https://academic.oup.com/jamia/article-pdf/28/11/2546/40576495/ocab153.pdf","source":{"id":"https://openalex.org/S129839026","display_name":"Journal of the American Medical Informatics Association","issn_l":"1067-5027","issn":["1067-5027","1527-974X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association","raw_type":"journal-article"},"type":"erratum","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/jamia/article-pdf/28/11/2546/40576495/ocab153.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":null,"display_name":"Sam Henry","orcid":"https://orcid.org/0000-0002-1457-5724"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Sam Henry","raw_affiliation_strings":[],"raw_orcid":"https://orcid.org/0000-0002-1457-5724","affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5080116611","display_name":"Yanshan Wang","orcid":"https://orcid.org/0000-0003-4433-7839"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Yanshan Wang","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087033178","display_name":"Feichen Shen","orcid":"https://orcid.org/0000-0002-7803-2331"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Feichen Shen","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5070926324","display_name":"\u00d6zlem Uzuner","orcid":"https://orcid.org/0000-0001-8011-9850"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Ozlem Uzuner","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":0,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":3967,"currency":"USD","value_usd":3967},"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":26,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":"28","issue":"11","first_page":"2546","last_page":"2546"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9927999973297119,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10181","display_name":"Natural Language Processing Techniques","score":0.968500018119812,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/normalization","display_name":"Normalization (sociology)","score":0.7746915817260742},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.7114863395690918},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.6985371112823486},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.556088387966156},{"id":"https://openalex.org/keywords/health-records","display_name":"Health records","score":0.5082011222839355},{"id":"https://openalex.org/keywords/task","display_name":"Task (project management)","score":0.5019633769989014},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.32609832286834717},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.047932177782058716},{"id":"https://openalex.org/keywords/health-care","display_name":"Health care","score":0.047486960887908936}],"concepts":[{"id":"https://openalex.org/C136886441","wikidata":"https://www.wikidata.org/wiki/Q926129","display_name":"Normalization (sociology)","level":2,"score":0.7746915817260742},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.7114863395690918},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.6985371112823486},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.556088387966156},{"id":"https://openalex.org/C3019952477","wikidata":"https://www.wikidata.org/wiki/Q1324077","display_name":"Health records","level":3,"score":0.5082011222839355},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.5019633769989014},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.32609832286834717},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.047932177782058716},{"id":"https://openalex.org/C160735492","wikidata":"https://www.wikidata.org/wiki/Q31207","display_name":"Health care","level":2,"score":0.047486960887908936},{"id":"https://openalex.org/C201995342","wikidata":"https://www.wikidata.org/wiki/Q682496","display_name":"Systems engineering","level":1,"score":0.0},{"id":"https://openalex.org/C144024400","wikidata":"https://www.wikidata.org/wiki/Q21201","display_name":"Sociology","level":0,"score":0.0},{"id":"https://openalex.org/C19165224","wikidata":"https://www.wikidata.org/wiki/Q23404","display_name":"Anthropology","level":1,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C50522688","wikidata":"https://www.wikidata.org/wiki/Q189833","display_name":"Economic growth","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1093/jamia/ocab153","is_oa":true,"landing_page_url":"https://doi.org/10.1093/jamia/ocab153","pdf_url":"https://academic.oup.com/jamia/article-pdf/28/11/2546/40576495/ocab153.pdf","source":{"id":"https://openalex.org/S129839026","display_name":"Journal of the American Medical Informatics Association","issn_l":"1067-5027","issn":["1067-5027","1527-974X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association","raw_type":"journal-article"},{"id":"pmid:34401908","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34401908","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association : JAMIA","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:8510287","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8510287","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Am Med Inform Assoc","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/jamia/ocab153","is_oa":true,"landing_page_url":"https://doi.org/10.1093/jamia/ocab153","pdf_url":"https://academic.oup.com/jamia/article-pdf/28/11/2546/40576495/ocab153.pdf","source":{"id":"https://openalex.org/S129839026","display_name":"Journal of the American Medical Informatics Association","issn_l":"1067-5027","issn":["1067-5027","1527-974X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of the American Medical Informatics Association","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.8600000143051147,"id":"https://metadata.un.org/sdg/4","display_name":"Quality Education"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3088349482.pdf"},"referenced_works_count":31,"referenced_works":["https://openalex.org/W128190844","https://openalex.org/W283797413","https://openalex.org/W1019512417","https://openalex.org/W1034374084","https://openalex.org/W1622055787","https://openalex.org/W2061166439","https://openalex.org/W2074640468","https://openalex.org/W2085752173","https://openalex.org/W2107580398","https://openalex.org/W2109206523","https://openalex.org/W2114039834","https://openalex.org/W2119412782","https://openalex.org/W2122966699","https://openalex.org/W2129113459","https://openalex.org/W2131546905","https://openalex.org/W2137407193","https://openalex.org/W2145578524","https://openalex.org/W2156235098","https://openalex.org/W2158743996","https://openalex.org/W2159583324","https://openalex.org/W2160987310","https://openalex.org/W2168041406","https://openalex.org/W2169099542","https://openalex.org/W2259159222","https://openalex.org/W2346452181","https://openalex.org/W2404369708","https://openalex.org/W2911489562","https://openalex.org/W2917968119","https://openalex.org/W2975249097","https://openalex.org/W2977393556","https://openalex.org/W2979250794"],"related_works":["https://openalex.org/W2953716828","https://openalex.org/W2904857019","https://openalex.org/W2944728705","https://openalex.org/W3011538607","https://openalex.org/W2904022177","https://openalex.org/W2591697403","https://openalex.org/W4321441197","https://openalex.org/W2359348847","https://openalex.org/W4294432981","https://openalex.org/W4321276295"],"abstract_inverted_index":{"Objective":[0],"The":[2,175,183],"2019":[3],"National":[4],"Natural":[5],"language":[6],"processing":[7],"(NLP)":[8],"Clinical":[9],"Challenges":[10],"(n2c2)/Open":[11],"Health":[12],"NLP":[13],"(OHNLP)":[14],"shared":[15],"task":[16],"track":[17,29],"3,":[18],"focused":[19],"on":[20],"medical":[21,43,104],"concept":[22,128],"normalization":[23],"(MCN)":[24],"in":[25,38,98,171],"clinical":[26],"records.":[27],"This":[28,108],"aimed":[30],"to":[31,45,103,111,124],"assess":[32],"the":[33,36,54,57,62,68,73,77,132,172,202,256],"state":[34,75],"of":[35,72,76,143,167,181,222,241,250,258],"art":[37],"identifying":[39],"and":[40,70,79,87,152,185,193,227,252],"matching":[41],"salient":[42],"concepts":[44,105],"a":[46],"controlled":[47],"vocabulary.":[48],"In":[49],"this":[50],"paper,":[51],"we":[52],"describe":[53,56],"task,":[55],"data":[58],"set":[59],"used,":[60],"compare":[61],"participating":[63],"systems,":[64],"present":[65],"results,":[66],"identify":[67,80],"strengths":[69],"limitations":[71],"current":[74],"art,":[78],"directions":[81],"for":[82,214],"future":[83],"research.":[84],"Materials":[86],"methods":[88],"Participating":[90],"teams":[91,169,190,205],"were":[92,106,118,157,191,212,238],"provided":[93],"with":[94,120,229],"narrative":[95],"discharge":[96],"summaries":[97],"which":[99],"text":[100,113],"spans":[101,114],"corresponding":[102],"identified.":[107],"paper":[109],"refers":[110],"these":[112,122],"as":[115],"mentions.":[116],"Teams":[117],"tasked":[119],"normalizing":[121],"mentions":[123,219,228,240],"concepts,":[125],"represented":[126,139],"by":[127],"unique":[129],"identifiers,":[130],"within":[131],"Unified":[133],"Medical":[134],"Language":[135],"System.":[136],"Submitted":[137],"systems":[138],"4":[140],"broad":[141],"categories":[142],"approaches:":[144],"cascading":[145],"dictionary":[146],"matching,":[147],"cosine":[148],"distance,":[149],"deep":[150],"learning,":[151],"retrieve-and-rank":[153],"systems.":[154],"Disambiguation":[155],"modules":[156],"common":[158],"across":[159],"all":[160,189,215],"approaches.":[161],"Results":[163],"A":[165],"total":[166],"33":[168],"participated":[170],"MCN":[173],"task.":[174],"best-performing":[176],"team":[177],"achieved":[178],"an":[179],"accuracy":[180],"0.8526.":[182],"median":[184],"mean":[186],"performances":[187],"among":[188,201],"0.7733":[192],"0.7426,":[194],"respectively.":[195],"Conclusions":[197],"Overall":[199],"performance":[200],"top":[203],"10":[204],"was":[206],"high.":[207],"However,":[208],"several":[209],"mention":[210,254],"types":[211],"challenging":[213,237],"teams.":[216],"These":[217],"included":[218],"requiring":[220],"disambiguation":[221],"misspelled":[223],"words,":[224],"acronyms,":[225],"abbreviations,":[226],"more":[230],"than":[231],"1":[232],"possible":[233],"semantic":[234],"type.":[235],"Also":[236],"complex":[239],"long,":[242],"multi-word":[243],"terms":[244],"that":[245],"may":[246],"require":[247],"new":[248],"ways":[249],"extracting":[251],"representing":[253],"meaning,":[255],"use":[257],"domain":[259],"knowledge,":[260],"parse":[261],"trees,":[262],"or":[263],"hand-crafted":[264],"rules.":[265]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":7},{"year":2023,"cited_by_count":6},{"year":2022,"cited_by_count":5},{"year":2021,"cited_by_count":6},{"year":2020,"cited_by_count":1}],"updated_date":"2026-07-14T23:27:15.235271","created_date":"2025-10-10T00:00:00"}
