{"id":"https://openalex.org/W4399656603","doi":"https://doi.org/10.1093/gpbjnl/qzae045","title":"CBioProfiler: A Web and Standalone Pipeline for Cancer Biomarker and Subtype Characterization","display_name":"CBioProfiler: A Web and Standalone Pipeline for Cancer Biomarker and Subtype Characterization","publication_year":2024,"publication_date":"2024-06-01","ids":{"openalex":"https://openalex.org/W4399656603","doi":"https://doi.org/10.1093/gpbjnl/qzae045","pmid":"https://pubmed.ncbi.nlm.nih.gov/38867700"},"language":"en","primary_location":{"id":"doi:10.1093/gpbjnl/qzae045","is_oa":true,"landing_page_url":"https://doi.org/10.1093/gpbjnl/qzae045","pdf_url":"https://academic.oup.com/gpb/article-pdf/22/3/qzae045/59694315/qzae045.pdf","source":{"id":"https://openalex.org/S155547894","display_name":"Genomics Proteomics & Bioinformatics","issn_l":"1672-0229","issn":["1672-0229","2210-3244"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Genomics, Proteomics &amp; Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/gpb/article-pdf/22/3/qzae045/59694315/qzae045.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100397101","display_name":"Xiaoping Liu","orcid":"https://orcid.org/0000-0001-6179-0964"},"institutions":[{"id":"https://openalex.org/I37461747","display_name":"Wuhan University","ror":"https://ror.org/033vjfk17","country_code":"CN","type":"education","lineage":["https://openalex.org/I37461747"]},{"id":"https://openalex.org/I4210120234","display_name":"Zhongnan Hospital of Wuhan University","ror":"https://ror.org/01v5mqw79","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210120234"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Xiaoping Liu","raw_affiliation_strings":["Cancer Precision Diagnosis and Treatment and Translational Medicine Hubei Engineering Research Center, Zhongnan Hospital of Wuhan University , Wuhan 430071,","Department of Pathology, Zhongnan Hospital of Wuhan University , Wuhan 430071,","Department of Urology, Zhongnan Hospital of Wuhan University , Wuhan 430071,"],"affiliations":[{"raw_affiliation_string":"Cancer Precision Diagnosis and Treatment and Translational Medicine Hubei Engineering Research Center, Zhongnan Hospital of Wuhan University , Wuhan 430071,","institution_ids":["https://openalex.org/I4210120234","https://openalex.org/I37461747"]},{"raw_affiliation_string":"Department of Pathology, Zhongnan Hospital of Wuhan University , Wuhan 430071,","institution_ids":["https://openalex.org/I4210120234","https://openalex.org/I37461747"]},{"raw_affiliation_string":"Department of Urology, Zhongnan Hospital of Wuhan University , Wuhan 430071,","institution_ids":["https://openalex.org/I4210120234","https://openalex.org/I37461747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004384809","display_name":"Zisong Wang","orcid":"https://orcid.org/0009-0005-0357-4311"},"institutions":[{"id":"https://openalex.org/I37461747","display_name":"Wuhan University","ror":"https://ror.org/033vjfk17","country_code":"CN","type":"education","lineage":["https://openalex.org/I37461747"]},{"id":"https://openalex.org/I4210120234","display_name":"Zhongnan Hospital of Wuhan University","ror":"https://ror.org/01v5mqw79","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210120234"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zisong Wang","raw_affiliation_strings":["Department of Urology, Zhongnan Hospital of Wuhan University , Wuhan 430071,"],"affiliations":[{"raw_affiliation_string":"Department of Urology, Zhongnan Hospital of Wuhan University , Wuhan 430071,","institution_ids":["https://openalex.org/I4210120234","https://openalex.org/I37461747"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Hongjie Shi","orcid":"https://orcid.org/0009-0008-7917-3241"},"institutions":[{"id":"https://openalex.org/I37461747","display_name":"Wuhan University","ror":"https://ror.org/033vjfk17","country_code":"CN","type":"education","lineage":["https://openalex.org/I37461747"]},{"id":"https://openalex.org/I4210120234","display_name":"Zhongnan Hospital of Wuhan University","ror":"https://ror.org/01v5mqw79","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210120234"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hongjie Shi","raw_affiliation_strings":["Cancer Precision Diagnosis and Treatment and Translational Medicine Hubei Engineering Research Center, Zhongnan Hospital of Wuhan University , Wuhan 430071,","Department of Biological Repositories, Zhongnan Hospital of Wuhan University , Wuhan 430071,"],"affiliations":[{"raw_affiliation_string":"Cancer Precision Diagnosis and Treatment and Translational Medicine Hubei Engineering Research Center, Zhongnan Hospital of Wuhan University , Wuhan 430071,","institution_ids":["https://openalex.org/I4210120234","https://openalex.org/I37461747"]},{"raw_affiliation_string":"Department of Biological Repositories, Zhongnan Hospital of Wuhan University , Wuhan 430071,","institution_ids":["https://openalex.org/I4210120234","https://openalex.org/I37461747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100359846","display_name":"Sheng Li","orcid":"https://orcid.org/0000-0003-4070-7345"},"institutions":[{"id":"https://openalex.org/I37461747","display_name":"Wuhan University","ror":"https://ror.org/033vjfk17","country_code":"CN","type":"education","lineage":["https://openalex.org/I37461747"]},{"id":"https://openalex.org/I4210120234","display_name":"Zhongnan Hospital of Wuhan University","ror":"https://ror.org/01v5mqw79","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210120234"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Sheng Li","raw_affiliation_strings":["Cancer Precision Diagnosis and Treatment and Translational Medicine Hubei Engineering Research Center, Zhongnan Hospital of Wuhan University , Wuhan 430071,","Department of Biological Repositories, Zhongnan Hospital of Wuhan University , Wuhan 430071,","Department of Urology, Zhongnan Hospital of Wuhan University , Wuhan 430071,"],"affiliations":[{"raw_affiliation_string":"Cancer Precision Diagnosis and Treatment and Translational Medicine Hubei Engineering Research Center, Zhongnan Hospital of Wuhan University , Wuhan 430071,","institution_ids":["https://openalex.org/I4210120234","https://openalex.org/I37461747"]},{"raw_affiliation_string":"Department of Biological Repositories, Zhongnan Hospital of Wuhan University , Wuhan 430071,","institution_ids":["https://openalex.org/I4210120234","https://openalex.org/I37461747"]},{"raw_affiliation_string":"Department of Urology, Zhongnan Hospital of Wuhan University , Wuhan 430071,","institution_ids":["https://openalex.org/I4210120234","https://openalex.org/I37461747"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5009012652","display_name":"Xinghuan Wang","orcid":"https://orcid.org/0000-0003-3497-0024"},"institutions":[{"id":"https://openalex.org/I37461747","display_name":"Wuhan University","ror":"https://ror.org/033vjfk17","country_code":"CN","type":"education","lineage":["https://openalex.org/I37461747"]},{"id":"https://openalex.org/I4210120234","display_name":"Zhongnan Hospital of Wuhan University","ror":"https://ror.org/01v5mqw79","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210120234"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xinghuan Wang","raw_affiliation_strings":["Cancer Precision Diagnosis and Treatment and Translational Medicine Hubei Engineering Research Center, Zhongnan Hospital of Wuhan University , Wuhan 430071,","Department of Biological Repositories, Zhongnan Hospital of Wuhan University , Wuhan 430071,","Department of Urology, Zhongnan Hospital of Wuhan University , Wuhan 430071,"],"affiliations":[{"raw_affiliation_string":"Cancer Precision Diagnosis and Treatment and Translational Medicine Hubei Engineering Research Center, Zhongnan Hospital of Wuhan University , Wuhan 430071,","institution_ids":["https://openalex.org/I4210120234","https://openalex.org/I37461747"]},{"raw_affiliation_string":"Department of Biological Repositories, Zhongnan Hospital of Wuhan University , Wuhan 430071,","institution_ids":["https://openalex.org/I4210120234","https://openalex.org/I37461747"]},{"raw_affiliation_string":"Department of Urology, Zhongnan Hospital of Wuhan University , Wuhan 430071,","institution_ids":["https://openalex.org/I4210120234","https://openalex.org/I37461747"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5100397101"],"corresponding_institution_ids":["https://openalex.org/I37461747","https://openalex.org/I4210120234"],"apc_list":{"value":3500,"currency":"USD","value_usd":3500},"apc_paid":{"value":3500,"currency":"USD","value_usd":3500},"fwci":0.6869,"has_fulltext":true,"cited_by_count":3,"citation_normalized_percentile":{"value":0.68685717,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":96},"biblio":{"volume":"22","issue":"3","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9959999918937683,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biomarker","display_name":"Biomarker","score":0.7125307321548462},{"id":"https://openalex.org/keywords/pipeline","display_name":"Pipeline (software)","score":0.7113864421844482},{"id":"https://openalex.org/keywords/cancer","display_name":"Cancer","score":0.5395227670669556},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4948965907096863},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4946431815624237},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2651749849319458},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.2395188808441162},{"id":"https://openalex.org/keywords/internal-medicine","display_name":"Internal medicine","score":0.17552730441093445},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.12721878290176392},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.08694088459014893}],"concepts":[{"id":"https://openalex.org/C2781197716","wikidata":"https://www.wikidata.org/wiki/Q864574","display_name":"Biomarker","level":2,"score":0.7125307321548462},{"id":"https://openalex.org/C43521106","wikidata":"https://www.wikidata.org/wiki/Q2165493","display_name":"Pipeline (software)","level":2,"score":0.7113864421844482},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.5395227670669556},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4948965907096863},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4946431815624237},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2651749849319458},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.2395188808441162},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.17552730441093445},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.12721878290176392},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.08694088459014893}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014408","descriptor_name":"Biomarkers, Tumor","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D014408","descriptor_name":"Biomarkers, Tumor","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D014408","descriptor_name":"Biomarkers, Tumor","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D014408","descriptor_name":"Biomarkers, Tumor","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D014408","descriptor_name":"Biomarkers, Tumor","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/gpbjnl/qzae045","is_oa":true,"landing_page_url":"https://doi.org/10.1093/gpbjnl/qzae045","pdf_url":"https://academic.oup.com/gpb/article-pdf/22/3/qzae045/59694315/qzae045.pdf","source":{"id":"https://openalex.org/S155547894","display_name":"Genomics Proteomics & Bioinformatics","issn_l":"1672-0229","issn":["1672-0229","2210-3244"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Genomics, Proteomics &amp; Bioinformatics","raw_type":"journal-article"},{"id":"pmid:38867700","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/38867700","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Genomics, proteomics & bioinformatics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:11464420","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11464420","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11464420/pdf/qzae045.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Genomics Proteomics Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/gpbjnl/qzae045","is_oa":true,"landing_page_url":"https://doi.org/10.1093/gpbjnl/qzae045","pdf_url":"https://academic.oup.com/gpb/article-pdf/22/3/qzae045/59694315/qzae045.pdf","source":{"id":"https://openalex.org/S155547894","display_name":"Genomics Proteomics & Bioinformatics","issn_l":"1672-0229","issn":["1672-0229","2210-3244"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Genomics, Proteomics &amp; Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.8199999928474426,"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being"}],"awards":[{"id":"https://openalex.org/G4317978611","display_name":null,"funder_award_id":"China","funder_id":"https://openalex.org/F4320321160","funder_display_name":"Sun Yat-sen University"}],"funders":[{"id":"https://openalex.org/F4320321160","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71"},{"id":"https://openalex.org/F4320324116","display_name":"Wuhan University","ror":"https://ror.org/033vjfk17"},{"id":"https://openalex.org/F4320329542","display_name":"Zhongnan Hospital of Wuhan University","ror":"https://ror.org/01v5mqw79"},{"id":"https://openalex.org/F4320336632","display_name":"Sun Yat-sen University Cancer Center","ror":"https://ror.org/0400g8r85"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4399656603.pdf","grobid_xml":"https://content.openalex.org/works/W4399656603.grobid-xml"},"referenced_works_count":48,"referenced_works":["https://openalex.org/W1519367410","https://openalex.org/W1883484737","https://openalex.org/W1915823074","https://openalex.org/W1966107523","https://openalex.org/W1966327575","https://openalex.org/W1967702193","https://openalex.org/W1977556410","https://openalex.org/W1986104055","https://openalex.org/W2005895632","https://openalex.org/W2028433016","https://openalex.org/W2035618305","https://openalex.org/W2044702943","https://openalex.org/W2071721660","https://openalex.org/W2075294566","https://openalex.org/W2096283457","https://openalex.org/W2099951161","https://openalex.org/W2115462905","https://openalex.org/W2122825543","https://openalex.org/W2130410032","https://openalex.org/W2130430382","https://openalex.org/W2135046866","https://openalex.org/W2146512944","https://openalex.org/W2155354546","https://openalex.org/W2170989872","https://openalex.org/W2180481128","https://openalex.org/W2214074259","https://openalex.org/W2230320310","https://openalex.org/W2295124130","https://openalex.org/W2560367415","https://openalex.org/W2574604975","https://openalex.org/W2742025850","https://openalex.org/W2795867722","https://openalex.org/W2796207353","https://openalex.org/W2954968628","https://openalex.org/W2980183989","https://openalex.org/W2981545603","https://openalex.org/W3005420916","https://openalex.org/W3012091221","https://openalex.org/W3039150496","https://openalex.org/W3090419846","https://openalex.org/W3119979438","https://openalex.org/W3144533641","https://openalex.org/W4205930639","https://openalex.org/W4234173777","https://openalex.org/W4251211582","https://openalex.org/W4283078991","https://openalex.org/W4294358748","https://openalex.org/W6697018724"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W2358668433","https://openalex.org/W4396701345","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W4396696052","https://openalex.org/W4402327032","https://openalex.org/W2382290278"],"abstract_inverted_index":{"Cancer":[0,51],"is":[1,24,156],"a":[2,57,121],"leading":[3],"cause":[4],"of":[5,11,21,78],"death":[6],"worldwide,":[7],"and":[8,13,31,53,60,71,83,112,115,128,132,144,147,160,162,166],"the":[9,18,163],"identification":[10,105],"biomarkers":[12,43,70,87],"subtypes":[14],"that":[15,63,125],"can":[16,169],"predict":[17],"long-term":[19],"survival":[20],"cancer":[22,42,69,74,85,95],"patients":[23],"essential":[25],"for":[26,40,67,81,101],"their":[27],"risk":[28],"stratification,":[29],"treatment,":[30],"prognosis.":[32],"However,":[33],"there":[34],"are":[35],"currently":[36],"no":[37],"standardized":[38],"tools":[39],"exploring":[41],"or":[44],"subtypes.":[45,72],"In":[46],"this":[47],"study,":[48],"we":[49],"introduced":[50],"Biomarker":[52],"subtype":[54,96,104,113],"Profiler":[55],"(CBioProfiler),":[56],"web":[58,154],"server":[59,155],"standalone":[61,164],"application":[62],"includes":[64,98,119],"two":[65],"pipelines":[66],"analyzing":[68],"The":[73,94,153],"biomarker":[75],"pipeline":[76,97],"consists":[77],"five":[79],"modules":[80,100],"identifying":[82],"annotating":[84],"survival-related":[86,90],"using":[88,106],"multiple":[89,107],"machine":[91,109],"learning":[92,110],"algorithms.":[93],"three":[99],"data":[102,134],"preprocessing,":[103],"unsupervised":[108],"methods,":[111],"evaluation":[114],"validation.":[116],"CBioProfiler":[117],"also":[118],"CuratedCancerPrognosisData,":[120],"novel":[122],"R":[123],"package":[124],"integrates":[126],"reviewed":[127],"curated":[129],"gene":[130],"expression":[131],"clinical":[133,151],"from":[135],"268":[136],"studies.":[137],"These":[138],"studies":[139],"cover":[140],"43":[141],"common":[142],"blood":[143],"solid":[145],"tumors":[146],"draw":[148],"upon":[149],"47,686":[150],"samples.":[152],"available":[157],"at":[158,172],"https://www.cbioprofiler.com/":[159],"https://cbioprofiler.znhospital.cn/CBioProfiler/,":[161],"app":[165],"source":[167],"code":[168],"be":[170],"found":[171],"https://github.com/liuxiaoping2020/CBioProfiler.":[173]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":1}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
