{"id":"https://openalex.org/W3002771037","doi":"https://doi.org/10.1093/database/baz143","title":"Tripal EUtils: a Tripal module to increase exchange and reuse of genome assembly metadata","display_name":"Tripal EUtils: a Tripal module to increase exchange and reuse of genome assembly metadata","publication_year":2019,"publication_date":"2019-11-22","ids":{"openalex":"https://openalex.org/W3002771037","doi":"https://doi.org/10.1093/database/baz143","mag":"3002771037","pmid":"https://pubmed.ncbi.nlm.nih.gov/31960040"},"language":"en","primary_location":{"id":"doi:10.1093/database/baz143","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baz143","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baz143/31953627/baz143.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baz143/31953627/baz143.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5067405076","display_name":"Brian Condon","orcid":"https://orcid.org/0000-0003-1944-021X"},"institutions":[{"id":"https://openalex.org/I1312222531","display_name":"Agricultural Research Service","ror":"https://ror.org/02d2m2044","country_code":"US","type":"government","lineage":["https://openalex.org/I1312222531","https://openalex.org/I1336096307"]},{"id":"https://openalex.org/I1336096307","display_name":"United States Department of Agriculture","ror":"https://ror.org/01na82s61","country_code":"US","type":"government","lineage":["https://openalex.org/I1336096307"]},{"id":"https://openalex.org/I4210098793","display_name":"National Agricultural Library","ror":"https://ror.org/00z6b1508","country_code":"US","type":"archive","lineage":["https://openalex.org/I1336096307","https://openalex.org/I4210098793"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"B Condon","raw_affiliation_strings":["United States Department of Agriculture, Agricultural Research Service, National Agricultural Library, 10301 Baltimore Avenue, Beltsville, MD 20705, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"United States Department of Agriculture, Agricultural Research Service, National Agricultural Library, 10301 Baltimore Avenue, Beltsville, MD 20705, USA","institution_ids":["https://openalex.org/I4210098793","https://openalex.org/I1336096307","https://openalex.org/I1312222531"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071568297","display_name":"Abdullah Almsaeed","orcid":"https://orcid.org/0000-0002-3804-1188"},"institutions":[{"id":"https://openalex.org/I1312222531","display_name":"Agricultural Research Service","ror":"https://ror.org/02d2m2044","country_code":"US","type":"government","lineage":["https://openalex.org/I1312222531","https://openalex.org/I1336096307"]},{"id":"https://openalex.org/I1336096307","display_name":"United States Department of Agriculture","ror":"https://ror.org/01na82s61","country_code":"US","type":"government","lineage":["https://openalex.org/I1336096307"]},{"id":"https://openalex.org/I4210098793","display_name":"National Agricultural Library","ror":"https://ror.org/00z6b1508","country_code":"US","type":"archive","lineage":["https://openalex.org/I1336096307","https://openalex.org/I4210098793"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"A Almsaeed","raw_affiliation_strings":["United States Department of Agriculture, Agricultural Research Service, National Agricultural Library, 10301 Baltimore Avenue, Beltsville, MD 20705, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"United States Department of Agriculture, Agricultural Research Service, National Agricultural Library, 10301 Baltimore Avenue, Beltsville, MD 20705, USA","institution_ids":["https://openalex.org/I4210098793","https://openalex.org/I1336096307","https://openalex.org/I1312222531"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009456724","display_name":"Sean Buehler","orcid":"https://orcid.org/0000-0003-0657-3152"},"institutions":[{"id":"https://openalex.org/I1312222531","display_name":"Agricultural Research Service","ror":"https://ror.org/02d2m2044","country_code":"US","type":"government","lineage":["https://openalex.org/I1312222531","https://openalex.org/I1336096307"]},{"id":"https://openalex.org/I1336096307","display_name":"United States Department of Agriculture","ror":"https://ror.org/01na82s61","country_code":"US","type":"government","lineage":["https://openalex.org/I1336096307"]},{"id":"https://openalex.org/I4210098793","display_name":"National Agricultural Library","ror":"https://ror.org/00z6b1508","country_code":"US","type":"archive","lineage":["https://openalex.org/I1336096307","https://openalex.org/I4210098793"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"S Buehler","raw_affiliation_strings":["United States Department of Agriculture, Agricultural Research Service, National Agricultural Library, 10301 Baltimore Avenue, Beltsville, MD 20705, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"United States Department of Agriculture, Agricultural Research Service, National Agricultural Library, 10301 Baltimore Avenue, Beltsville, MD 20705, USA","institution_ids":["https://openalex.org/I4210098793","https://openalex.org/I1336096307","https://openalex.org/I1312222531"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101958950","display_name":"Christopher Childers","orcid":"https://orcid.org/0000-0002-1253-5550"},"institutions":[{"id":"https://openalex.org/I1312222531","display_name":"Agricultural Research Service","ror":"https://ror.org/02d2m2044","country_code":"US","type":"government","lineage":["https://openalex.org/I1312222531","https://openalex.org/I1336096307"]},{"id":"https://openalex.org/I1336096307","display_name":"United States Department of Agriculture","ror":"https://ror.org/01na82s61","country_code":"US","type":"government","lineage":["https://openalex.org/I1336096307"]},{"id":"https://openalex.org/I4210098793","display_name":"National Agricultural Library","ror":"https://ror.org/00z6b1508","country_code":"US","type":"archive","lineage":["https://openalex.org/I1336096307","https://openalex.org/I4210098793"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"C P Childers","raw_affiliation_strings":["United States Department of Agriculture, Agricultural Research Service, National Agricultural Library, 10301 Baltimore Avenue, Beltsville, MD 20705, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"United States Department of Agriculture, Agricultural Research Service, National Agricultural Library, 10301 Baltimore Avenue, Beltsville, MD 20705, USA","institution_ids":["https://openalex.org/I4210098793","https://openalex.org/I1336096307","https://openalex.org/I1312222531"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015114586","display_name":"Stephen Ficklin","orcid":"https://orcid.org/0000-0001-9138-6292"},"institutions":[{"id":"https://openalex.org/I1312222531","display_name":"Agricultural Research Service","ror":"https://ror.org/02d2m2044","country_code":"US","type":"government","lineage":["https://openalex.org/I1312222531","https://openalex.org/I1336096307"]},{"id":"https://openalex.org/I1336096307","display_name":"United States Department of Agriculture","ror":"https://ror.org/01na82s61","country_code":"US","type":"government","lineage":["https://openalex.org/I1336096307"]},{"id":"https://openalex.org/I4210098793","display_name":"National Agricultural Library","ror":"https://ror.org/00z6b1508","country_code":"US","type":"archive","lineage":["https://openalex.org/I1336096307","https://openalex.org/I4210098793"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"S P Ficklin","raw_affiliation_strings":["United States Department of Agriculture, Agricultural Research Service, National Agricultural Library, 10301 Baltimore Avenue, Beltsville, MD 20705, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"United States Department of Agriculture, Agricultural Research Service, National Agricultural Library, 10301 Baltimore Avenue, Beltsville, MD 20705, USA","institution_ids":["https://openalex.org/I4210098793","https://openalex.org/I1336096307","https://openalex.org/I1312222531"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021572745","display_name":"Margaret Staton","orcid":"https://orcid.org/0000-0003-2971-9353"},"institutions":[{"id":"https://openalex.org/I1312222531","display_name":"Agricultural Research Service","ror":"https://ror.org/02d2m2044","country_code":"US","type":"government","lineage":["https://openalex.org/I1312222531","https://openalex.org/I1336096307"]},{"id":"https://openalex.org/I1336096307","display_name":"United States Department of Agriculture","ror":"https://ror.org/01na82s61","country_code":"US","type":"government","lineage":["https://openalex.org/I1336096307"]},{"id":"https://openalex.org/I4210098793","display_name":"National Agricultural Library","ror":"https://ror.org/00z6b1508","country_code":"US","type":"archive","lineage":["https://openalex.org/I1336096307","https://openalex.org/I4210098793"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"M E Staton","raw_affiliation_strings":["United States Department of Agriculture, Agricultural Research Service, National Agricultural Library, 10301 Baltimore Avenue, Beltsville, MD 20705, USA"],"raw_orcid":"https://orcid.org/0000-0003-2971-9353","affiliations":[{"raw_affiliation_string":"United States Department of Agriculture, Agricultural Research Service, National Agricultural Library, 10301 Baltimore Avenue, Beltsville, MD 20705, USA","institution_ids":["https://openalex.org/I4210098793","https://openalex.org/I1336096307","https://openalex.org/I1312222531"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5077698266","display_name":"Monica F. Poelchau","orcid":"https://orcid.org/0000-0002-4584-6056"},"institutions":[{"id":"https://openalex.org/I1312222531","display_name":"Agricultural Research Service","ror":"https://ror.org/02d2m2044","country_code":"US","type":"government","lineage":["https://openalex.org/I1312222531","https://openalex.org/I1336096307"]},{"id":"https://openalex.org/I1336096307","display_name":"United States Department of Agriculture","ror":"https://ror.org/01na82s61","country_code":"US","type":"government","lineage":["https://openalex.org/I1336096307"]},{"id":"https://openalex.org/I4210098793","display_name":"National Agricultural Library","ror":"https://ror.org/00z6b1508","country_code":"US","type":"archive","lineage":["https://openalex.org/I1336096307","https://openalex.org/I4210098793"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"M F Poelchau","raw_affiliation_strings":["United States Department of Agriculture, Agricultural Research Service, National Agricultural Library, 10301 Baltimore Avenue, Beltsville, MD 20705, USA"],"raw_orcid":"https://orcid.org/0000-0002-4584-6056","affiliations":[{"raw_affiliation_string":"United States Department of Agriculture, Agricultural Research Service, National Agricultural Library, 10301 Baltimore Avenue, Beltsville, MD 20705, USA","institution_ids":["https://openalex.org/I4210098793","https://openalex.org/I1336096307","https://openalex.org/I1312222531"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5077698266"],"corresponding_institution_ids":["https://openalex.org/I1312222531","https://openalex.org/I1336096307","https://openalex.org/I4210098793"],"apc_list":{"value":1415,"currency":"GBP","value_usd":1735},"apc_paid":{"value":1415,"currency":"GBP","value_usd":1735},"fwci":0.0,"has_fulltext":true,"cited_by_count":2,"citation_normalized_percentile":{"value":0.28608515,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":95},"biblio":{"volume":"2020","issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11937","display_name":"Research Data Management Practices","score":0.9965999722480774,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11937","display_name":"Research Data Management Practices","score":0.9965999722480774,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9919000267982483,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9876999855041504,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/metadata","display_name":"Metadata","score":0.8937066793441772},{"id":"https://openalex.org/keywords/interoperability","display_name":"Interoperability","score":0.7737448215484619},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7227283120155334},{"id":"https://openalex.org/keywords/data-mapping","display_name":"Data mapping","score":0.5525901317596436},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.5074276328086853},{"id":"https://openalex.org/keywords/data-element","display_name":"Data element","score":0.5039700865745544},{"id":"https://openalex.org/keywords/data-dictionary","display_name":"Data dictionary","score":0.5004391670227051},{"id":"https://openalex.org/keywords/database-catalog","display_name":"Database catalog","score":0.4994468688964844},{"id":"https://openalex.org/keywords/data-exchange","display_name":"Data exchange","score":0.49684789776802063},{"id":"https://openalex.org/keywords/metadata-repository","display_name":"Metadata repository","score":0.4852313995361328},{"id":"https://openalex.org/keywords/meta-data-services","display_name":"Meta Data Services","score":0.47462379932403564},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.4722145199775696},{"id":"https://openalex.org/keywords/reuse","display_name":"Reuse","score":0.4608217775821686},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.4569270610809326},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.3796319365501404},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.09612038731575012}],"concepts":[{"id":"https://openalex.org/C93518851","wikidata":"https://www.wikidata.org/wiki/Q180160","display_name":"Metadata","level":2,"score":0.8937066793441772},{"id":"https://openalex.org/C20136886","wikidata":"https://www.wikidata.org/wiki/Q749647","display_name":"Interoperability","level":2,"score":0.7737448215484619},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7227283120155334},{"id":"https://openalex.org/C137314826","wikidata":"https://www.wikidata.org/wiki/Q2330408","display_name":"Data mapping","level":2,"score":0.5525901317596436},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.5074276328086853},{"id":"https://openalex.org/C30872290","wikidata":"https://www.wikidata.org/wiki/Q1172389","display_name":"Data element","level":3,"score":0.5039700865745544},{"id":"https://openalex.org/C98143201","wikidata":"https://www.wikidata.org/wiki/Q1147639","display_name":"Data dictionary","level":3,"score":0.5004391670227051},{"id":"https://openalex.org/C65610166","wikidata":"https://www.wikidata.org/wiki/Q5227399","display_name":"Database catalog","level":4,"score":0.4994468688964844},{"id":"https://openalex.org/C15845906","wikidata":"https://www.wikidata.org/wiki/Q1172338","display_name":"Data exchange","level":2,"score":0.49684789776802063},{"id":"https://openalex.org/C153048206","wikidata":"https://www.wikidata.org/wiki/Q3454922","display_name":"Metadata repository","level":3,"score":0.4852313995361328},{"id":"https://openalex.org/C136976847","wikidata":"https://www.wikidata.org/wiki/Q6822297","display_name":"Meta Data Services","level":4,"score":0.47462379932403564},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.4722145199775696},{"id":"https://openalex.org/C206588197","wikidata":"https://www.wikidata.org/wiki/Q846574","display_name":"Reuse","level":2,"score":0.4608217775821686},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.4569270610809326},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.3796319365501404},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.09612038731575012},{"id":"https://openalex.org/C548081761","wikidata":"https://www.wikidata.org/wiki/Q180388","display_name":"Waste management","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000071253","descriptor_name":"Metadata","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000071253","descriptor_name":"Metadata","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000071253","descriptor_name":"Metadata","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007448","descriptor_name":"Invertebrates","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D007448","descriptor_name":"Invertebrates","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D007448","descriptor_name":"Invertebrates","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009317","descriptor_name":"National Library of Medicine (U.S.)","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009317","descriptor_name":"National Library of Medicine (U.S.)","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009317","descriptor_name":"National Library of Medicine (U.S.)","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010944","descriptor_name":"Plants","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010944","descriptor_name":"Plants","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010944","descriptor_name":"Plants","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014481","descriptor_name":"United States","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014481","descriptor_name":"United States","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014481","descriptor_name":"United States","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/database/baz143","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baz143","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baz143/31953627/baz143.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},{"id":"pmid:31960040","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/31960040","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database : the journal of biological databases and curation","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:6989756","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6989756","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Database (Oxford)","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/database/baz143","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baz143","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baz143/31953627/baz143.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G213246112","display_name":null,"funder_award_id":"1444573","funder_id":"https://openalex.org/F4320335353","funder_display_name":"National Science Foundation of Sri Lanka"},{"id":"https://openalex.org/G7618748963","display_name":null,"funder_award_id":"1444573","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320335353","display_name":"National Science Foundation of Sri Lanka","ror":"https://ror.org/010xaa060"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3002771037.pdf","grobid_xml":"https://content.openalex.org/works/W3002771037.grobid-xml"},"referenced_works_count":22,"referenced_works":["https://openalex.org/W156645367","https://openalex.org/W1574182225","https://openalex.org/W2036288429","https://openalex.org/W2085824957","https://openalex.org/W2096525273","https://openalex.org/W2103017472","https://openalex.org/W2129687578","https://openalex.org/W2141297584","https://openalex.org/W2141541659","https://openalex.org/W2144427809","https://openalex.org/W2151397621","https://openalex.org/W2225557190","https://openalex.org/W2232218540","https://openalex.org/W2302501749","https://openalex.org/W2773787581","https://openalex.org/W2898204371","https://openalex.org/W2964307465","https://openalex.org/W4239634997","https://openalex.org/W6606263545","https://openalex.org/W6672338044","https://openalex.org/W6689376206","https://openalex.org/W6713748237"],"related_works":["https://openalex.org/W2374379029","https://openalex.org/W2347306054","https://openalex.org/W2183628870","https://openalex.org/W4213068614","https://openalex.org/W3199469221","https://openalex.org/W3084772717","https://openalex.org/W2325085362","https://openalex.org/W3016521766","https://openalex.org/W2151972543","https://openalex.org/W2545809202"],"abstract_inverted_index":{"Data":[0],"and":[1,18,30,48,77,91,113,115],"metadata":[2,23,43,62,101],"interoperability":[3,124],"between":[4,25,45,67,125],"data":[5,15,28,75,89],"storage":[6],"systems":[7],"is":[8],"a":[9,93,105],"critical":[10],"component":[11],"of":[12,21],"the":[13,36,46,53,68,78],"FAIR":[14],"principles.":[16],"Programmatic":[17],"consistent":[19],"means":[20],"reconciling":[22],"models":[24,47],"databases":[26],"promote":[27],"exchange":[29],"thus":[31],"increases":[32],"its":[33],"access":[34],"to":[35,51,60,99,121],"scientific":[37],"community.":[38],"This":[39],"process":[40],"requires":[41],"(i)":[42],"mapping":[44,111],"(ii)":[49],"software":[50,95],"perform":[52],"mapping.":[54],"Here,":[55],"we":[56],"describe":[57],"our":[58],"efforts":[59],"map":[61],"associated":[63],"with":[64],"genome":[65],"assemblies":[66],"National":[69],"Center":[70],"for":[71,86,118],"Biotechnology":[72],"Information":[73],"(NCBI)":[74],"resources":[76],"Chado":[79],"biological":[80],"database":[81],"schema.":[82],"We":[83,108],"present":[84],"mappings":[85],"multiple":[87],"NCBI":[88,103],"structures":[90],"introduce":[92],"Tripal":[94,97],"module,":[96],"EUtils,":[98],"pull":[100],"from":[102],"into":[104],"Tripal/Chado":[106],"database.":[107],"discuss":[109],"potential":[110],"challenges":[112],"solutions":[114],"provide":[116],"suggestions":[117],"future":[119],"development":[120],"further":[122],"increase":[123],"these":[126],"platforms.":[127],"Database":[128],"URL:":[129],"https://github.com/NAL-i5K/tripal_eutils.":[130]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
