{"id":"https://openalex.org/W2992828242","doi":"https://doi.org/10.1093/database/baz130","title":"Plant Regulomics Portal (PRP): a comprehensive integrated regulatory information and analysis portal for plant genomes","display_name":"Plant Regulomics Portal (PRP): a comprehensive integrated regulatory information and analysis portal for plant genomes","publication_year":2019,"publication_date":"2019-01-01","ids":{"openalex":"https://openalex.org/W2992828242","doi":"https://doi.org/10.1093/database/baz130","mag":"2992828242","pmid":"https://pubmed.ncbi.nlm.nih.gov/31796964"},"language":"en","primary_location":{"id":"doi:10.1093/database/baz130","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baz130","pdf_url":null,"source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1093/database/baz130","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5030601187","display_name":"Ganesh Panzade","orcid":"https://orcid.org/0000-0002-3940-6724"},"institutions":[{"id":"https://openalex.org/I99364266","display_name":"Academy of Scientific and Innovative Research","ror":"https://ror.org/053rcsq61","country_code":"IN","type":"education","lineage":["https://openalex.org/I99364266"]},{"id":"https://openalex.org/I4210128326","display_name":"Institute of Himalayan Bioresource Technology","ror":"https://ror.org/03xcn0p72","country_code":"IN","type":"facility","lineage":["https://openalex.org/I2799351866","https://openalex.org/I4210128326","https://openalex.org/I4210134808","https://openalex.org/I66760702"]},{"id":"https://openalex.org/I189590672","display_name":"Kansas State University","ror":"https://ror.org/05p1j8758","country_code":"US","type":"education","lineage":["https://openalex.org/I189590672"]}],"countries":["IN","US"],"is_corresponding":false,"raw_author_name":"Ganesh Panzade","raw_affiliation_strings":["Academy of Scientific & Innovative Research (AcSIR), CSIR-HRDC Campus, Postal Staff College Area, Sector 19, Kamla Nehru Nagar, Ghaziabad, Uttar Pradesh 201002, India","Division of Biology, Kansas State University, Zinovyeva Lab, 28 Ackert Hall, Manhattan, KS, USA, 66506","Studio of Computational Biology & Bioinformatics, Biotechnology Division, CSIR-Institute of Himalayan Bioresource Technology (CSIR-IHBT), Palampur, Kangra, Himachal Pradesh 176061, India"],"affiliations":[{"raw_affiliation_string":"Academy of Scientific & Innovative Research (AcSIR), CSIR-HRDC Campus, Postal Staff College Area, Sector 19, Kamla Nehru Nagar, Ghaziabad, Uttar Pradesh 201002, India","institution_ids":["https://openalex.org/I99364266"]},{"raw_affiliation_string":"Division of Biology, Kansas State University, Zinovyeva Lab, 28 Ackert Hall, Manhattan, KS, USA, 66506","institution_ids":["https://openalex.org/I189590672"]},{"raw_affiliation_string":"Studio of Computational Biology & Bioinformatics, Biotechnology Division, CSIR-Institute of Himalayan Bioresource Technology (CSIR-IHBT), Palampur, Kangra, Himachal Pradesh 176061, India","institution_ids":["https://openalex.org/I4210128326"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016907714","display_name":"Indu Gangwar","orcid":null},"institutions":[{"id":"https://openalex.org/I4210128326","display_name":"Institute of Himalayan Bioresource Technology","ror":"https://ror.org/03xcn0p72","country_code":"IN","type":"facility","lineage":["https://openalex.org/I2799351866","https://openalex.org/I4210128326","https://openalex.org/I4210134808","https://openalex.org/I66760702"]},{"id":"https://openalex.org/I99364266","display_name":"Academy of Scientific and Innovative Research","ror":"https://ror.org/053rcsq61","country_code":"IN","type":"education","lineage":["https://openalex.org/I99364266"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Indu Gangwar","raw_affiliation_strings":["Academy of Scientific & Innovative Research (AcSIR), CSIR-HRDC Campus, Postal Staff College Area, Sector 19, Kamla Nehru Nagar, Ghaziabad, Uttar Pradesh 201002, India","Studio of Computational Biology & Bioinformatics, Biotechnology Division, CSIR-Institute of Himalayan Bioresource Technology (CSIR-IHBT), Palampur, Kangra, Himachal Pradesh 176061, India"],"affiliations":[{"raw_affiliation_string":"Academy of Scientific & Innovative Research (AcSIR), CSIR-HRDC Campus, Postal Staff College Area, Sector 19, Kamla Nehru Nagar, Ghaziabad, Uttar Pradesh 201002, India","institution_ids":["https://openalex.org/I99364266"]},{"raw_affiliation_string":"Studio of Computational Biology & Bioinformatics, Biotechnology Division, CSIR-Institute of Himalayan Bioresource Technology (CSIR-IHBT), Palampur, Kangra, Himachal Pradesh 176061, India","institution_ids":["https://openalex.org/I4210128326"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066138172","display_name":"Supriya Awasthi","orcid":null},"institutions":[{"id":"https://openalex.org/I4210128326","display_name":"Institute of Himalayan Bioresource Technology","ror":"https://ror.org/03xcn0p72","country_code":"IN","type":"facility","lineage":["https://openalex.org/I2799351866","https://openalex.org/I4210128326","https://openalex.org/I4210134808","https://openalex.org/I66760702"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Supriya Awasthi","raw_affiliation_strings":["Studio of Computational Biology & Bioinformatics, Biotechnology Division, CSIR-Institute of Himalayan Bioresource Technology (CSIR-IHBT), Palampur, Kangra, Himachal Pradesh 176061, India"],"affiliations":[{"raw_affiliation_string":"Studio of Computational Biology & Bioinformatics, Biotechnology Division, CSIR-Institute of Himalayan Bioresource Technology (CSIR-IHBT), Palampur, Kangra, Himachal Pradesh 176061, India","institution_ids":["https://openalex.org/I4210128326"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066486846","display_name":"Nitesh Kumar Sharma","orcid":"https://orcid.org/0000-0001-6379-1426"},"institutions":[{"id":"https://openalex.org/I99364266","display_name":"Academy of Scientific and Innovative Research","ror":"https://ror.org/053rcsq61","country_code":"IN","type":"education","lineage":["https://openalex.org/I99364266"]},{"id":"https://openalex.org/I4210128326","display_name":"Institute of Himalayan Bioresource Technology","ror":"https://ror.org/03xcn0p72","country_code":"IN","type":"facility","lineage":["https://openalex.org/I2799351866","https://openalex.org/I4210128326","https://openalex.org/I4210134808","https://openalex.org/I66760702"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Nitesh Sharma","raw_affiliation_strings":["Academy of Scientific & Innovative Research (AcSIR), CSIR-HRDC Campus, Postal Staff College Area, Sector 19, Kamla Nehru Nagar, Ghaziabad, Uttar Pradesh 201002, India","Studio of Computational Biology & Bioinformatics, Biotechnology Division, CSIR-Institute of Himalayan Bioresource Technology (CSIR-IHBT), Palampur, Kangra, Himachal Pradesh 176061, India"],"affiliations":[{"raw_affiliation_string":"Academy of Scientific & Innovative Research (AcSIR), CSIR-HRDC Campus, Postal Staff College Area, Sector 19, Kamla Nehru Nagar, Ghaziabad, Uttar Pradesh 201002, India","institution_ids":["https://openalex.org/I99364266"]},{"raw_affiliation_string":"Studio of Computational Biology & Bioinformatics, Biotechnology Division, CSIR-Institute of Himalayan Bioresource Technology (CSIR-IHBT), Palampur, Kangra, Himachal Pradesh 176061, India","institution_ids":["https://openalex.org/I4210128326"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5114123148","display_name":"Ravi Shankar","orcid":null},"institutions":[{"id":"https://openalex.org/I99364266","display_name":"Academy of Scientific and Innovative Research","ror":"https://ror.org/053rcsq61","country_code":"IN","type":"education","lineage":["https://openalex.org/I99364266"]},{"id":"https://openalex.org/I4210128326","display_name":"Institute of Himalayan Bioresource Technology","ror":"https://ror.org/03xcn0p72","country_code":"IN","type":"facility","lineage":["https://openalex.org/I2799351866","https://openalex.org/I4210128326","https://openalex.org/I4210134808","https://openalex.org/I66760702"]}],"countries":["IN"],"is_corresponding":true,"raw_author_name":"Ravi Shankar","raw_affiliation_strings":["Academy of Scientific & Innovative Research (AcSIR), CSIR-HRDC Campus, Postal Staff College Area, Sector 19, Kamla Nehru Nagar, Ghaziabad, Uttar Pradesh 201002, India","Studio of Computational Biology & Bioinformatics, Biotechnology Division, CSIR-Institute of Himalayan Bioresource Technology (CSIR-IHBT), Palampur, Kangra, Himachal Pradesh 176061, India"],"affiliations":[{"raw_affiliation_string":"Academy of Scientific & Innovative Research (AcSIR), CSIR-HRDC Campus, Postal Staff College Area, Sector 19, Kamla Nehru Nagar, Ghaziabad, Uttar Pradesh 201002, India","institution_ids":["https://openalex.org/I99364266"]},{"raw_affiliation_string":"Studio of Computational Biology & Bioinformatics, Biotechnology Division, CSIR-Institute of Himalayan Bioresource Technology (CSIR-IHBT), Palampur, Kangra, Himachal Pradesh 176061, India","institution_ids":["https://openalex.org/I4210128326"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5114123148"],"corresponding_institution_ids":["https://openalex.org/I4210128326","https://openalex.org/I99364266"],"apc_list":{"value":1415,"currency":"GBP","value_usd":1735},"apc_paid":{"value":1415,"currency":"GBP","value_usd":1735},"fwci":0.2893,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":{"value":0.75390606,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":"2019","issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10494","display_name":"Plant Virus Research Studies","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10494","display_name":"Plant Virus Research Studies","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10240","display_name":"Plant tissue culture and regeneration","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10434","display_name":"Chromosomal and Genetic Variations","score":0.9983999729156494,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.519855797290802},{"id":"https://openalex.org/keywords/internet-portal","display_name":"Internet portal","score":0.5126585364341736},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5021786689758301},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.48108574748039246},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.3422539532184601},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3272234797477722},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.30281493067741394},{"id":"https://openalex.org/keywords/the-internet","display_name":"The Internet","score":0.21884652972221375},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.17176377773284912},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.1337616741657257}],"concepts":[{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.519855797290802},{"id":"https://openalex.org/C3019770801","wikidata":"https://www.wikidata.org/wiki/Q186165","display_name":"Internet portal","level":3,"score":0.5126585364341736},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5021786689758301},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.48108574748039246},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.3422539532184601},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3272234797477722},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.30281493067741394},{"id":"https://openalex.org/C110875604","wikidata":"https://www.wikidata.org/wiki/Q75","display_name":"The Internet","level":2,"score":0.21884652972221375},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.17176377773284912},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.1337616741657257}],"mesh":[{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D018506","descriptor_name":"Gene Expression Regulation, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018506","descriptor_name":"Gene Expression Regulation, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018506","descriptor_name":"Gene Expression Regulation, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018745","descriptor_name":"Genome, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018745","descriptor_name":"Genome, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018745","descriptor_name":"Genome, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018749","descriptor_name":"RNA, Plant","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D018749","descriptor_name":"RNA, Plant","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D018749","descriptor_name":"RNA, Plant","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D019175","descriptor_name":"DNA Methylation","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D019175","descriptor_name":"DNA Methylation","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D019175","descriptor_name":"DNA Methylation","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/database/baz130","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baz130","pdf_url":null,"source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},{"id":"pmid:31796964","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/31796964","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database : the journal of biological databases and curation","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:6891001","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6891001","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Database (Oxford)","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/database/baz130","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baz130","pdf_url":null,"source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320320721","display_name":"Council of Scientific and Industrial Research, India","ror":"https://ror.org/021wm7p51"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":35,"referenced_works":["https://openalex.org/W144423133","https://openalex.org/W1994642061","https://openalex.org/W1998016418","https://openalex.org/W1999348612","https://openalex.org/W2019471731","https://openalex.org/W2026175443","https://openalex.org/W2026343134","https://openalex.org/W2035736338","https://openalex.org/W2052265665","https://openalex.org/W2056694244","https://openalex.org/W2061329976","https://openalex.org/W2068847708","https://openalex.org/W2070792578","https://openalex.org/W2071501400","https://openalex.org/W2082407716","https://openalex.org/W2086153601","https://openalex.org/W2096138645","https://openalex.org/W2096652998","https://openalex.org/W2100305481","https://openalex.org/W2106403947","https://openalex.org/W2124985265","https://openalex.org/W2131271579","https://openalex.org/W2131374955","https://openalex.org/W2143362788","https://openalex.org/W2144177541","https://openalex.org/W2150194502","https://openalex.org/W2151476452","https://openalex.org/W2151883199","https://openalex.org/W2157953344","https://openalex.org/W2193801262","https://openalex.org/W2253569736","https://openalex.org/W2292621739","https://openalex.org/W2561544479","https://openalex.org/W2563086061","https://openalex.org/W2565406467"],"related_works":["https://openalex.org/W2748952813","https://openalex.org/W2996664812","https://openalex.org/W2901643789","https://openalex.org/W4242579067","https://openalex.org/W2889455350","https://openalex.org/W2936212458","https://openalex.org/W2955358834","https://openalex.org/W2889332303","https://openalex.org/W2908283918","https://openalex.org/W2989885456"],"abstract_inverted_index":{"Gene":[0],"regulation":[1],"is":[2,220],"a":[3,19,63,100,133,150,212],"highly":[4],"complex":[5],"and":[6,28,31,48,111,116,123,142,148,172,178,180,207,234,259],"networked":[7],"phenomenon":[8],"where":[9],"multiple":[10],"tiers":[11],"of":[12,45,51,62,103,129,144,156,168,182,203,209,216,232],"control":[13,33],"determine":[14],"the":[15,24,46,60,90,130,145,157,226],"cell":[16],"state":[17,61],"in":[18,211],"spatio-temporal":[20,49],"manner.":[21,214],"Among":[22],"these,":[23],"transcription":[25,169],"factors,":[26],"DNA":[27],"histone":[29,114],"modifications,":[30],"post-transcriptional":[32],"by":[34,98],"small":[35],"RNAs":[36],"like":[37],"miRNAs":[38],"serve":[39],"as":[40],"major":[41],"regulators.":[42],"An":[43],"understanding":[44],"integrative":[47,80],"impact":[50],"these":[52],"regulatory":[53,134],"factors":[54,170],"can":[55,190],"provide":[56,192],"better":[57],"insights":[58],"into":[59],"'cell":[64],"system'.":[65],"Yet,":[66],"there":[67],"are":[68],"limited":[69],"resources":[70],"available":[71],"to":[72],"this":[73],"effect.":[74],"Therefore,":[75],"we":[76],"hereby":[77],"report":[78],"an":[79,221],"information":[81,193],"portal":[82,94,131],"(Plant":[83],"Regulomics":[84],"Portal;":[85],"PRP)":[86],"for":[87,89,137,153,166,184,246],"plants":[88],"first":[91],"time.":[92],"The":[93,126],"has":[95,162],"been":[96],"developed":[97],"integrating":[99],"huge":[101],"amount":[102],"curated":[104],"data":[105,210,245],"from":[106],"published":[107],"sources,":[108],"RNA-,":[109],"methylome-":[110],"sRNA/miRNA":[112],"sequencing,":[113],"modifications":[115],"repeats,":[117],"gene":[118,121,176],"ontology,":[119],"digital":[120],"expression":[122,177],"characterized":[124],"pathways.":[125],"key":[127],"features":[128,165],"include":[132],"search":[135,158],"engine":[136],"fetching":[138],"numerous":[139,163],"analytical":[140,164],"outputs":[141],"tracks":[143],"abovementioned":[146],"regulators":[147],"also":[149,161,191],"genome":[151],"browser":[152],"integrated":[154],"visualization":[155],"results.":[159],"It":[160,189],"analyses":[167],"(TFs)":[171],"sRNA/miRNA,":[173],"spot-specific":[174],"methylation,":[175],"interactions":[179],"details":[181],"pathways":[183],"any":[185],"given":[186],"genomic":[187],"element.":[188],"on":[194],"potential":[195],"RdDM":[196],"regulation,":[197],"while":[198],"facilitating":[199],"enrichment":[200],"analysis,":[201],"generation":[202],"visually":[204],"rich":[205],"plots":[206],"downloading":[208],"selective":[213],"Visualization":[215],"intricate":[217],"biological":[218],"networks":[219],"important":[222],"feature":[223],"which":[224],"utilizes":[225],"Neo4j":[227],"Graph":[228],"database":[229],"making":[230],"analysis":[231],"relationships":[233],"long-range":[235],"system":[236],"viewing":[237],"possible.":[238],"Till":[239],"date,":[240],"PRP":[241],"hosts":[242],"571-GB":[243],"processed":[244],"four":[247],"plant":[248],"species":[249],"namely":[250],"Arabidopsis":[251],"thaliana,":[252],"Oryza":[253],"sativa":[254],"subsp.":[255],"japonica,":[256],"Zea":[257],"mays":[258],"Glycine":[260],"max.":[261],"Database":[262],"URL:":[263],"https://scbb.ihbt.res.in/PRP.":[264]},"counts_by_year":[{"year":2023,"cited_by_count":1},{"year":2021,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}