{"id":"https://openalex.org/W2980048930","doi":"https://doi.org/10.1093/database/baz084","title":"The extraction of complex relationships and their conversion to biological expression language (BEL) overview of the BioCreative VI (2017) BEL track","display_name":"The extraction of complex relationships and their conversion to biological expression language (BEL) overview of the BioCreative VI (2017) BEL track","publication_year":2019,"publication_date":"2019-01-01","ids":{"openalex":"https://openalex.org/W2980048930","doi":"https://doi.org/10.1093/database/baz084","mag":"2980048930","pmid":"https://pubmed.ncbi.nlm.nih.gov/31603193"},"language":"en","primary_location":{"id":"doi:10.1093/database/baz084","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baz084","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baz084/30131322/baz084.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baz084/30131322/baz084.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5090087547","display_name":"Sumit Madan","orcid":"https://orcid.org/0000-0001-9970-4144"},"institutions":[{"id":"https://openalex.org/I4210098248","display_name":"Fraunhofer Institute for Algorithms and Scientific Computing","ror":"https://ror.org/00trw9c49","country_code":"DE","type":"facility","lineage":["https://openalex.org/I4210098248","https://openalex.org/I4923324"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Sumit Madan","raw_affiliation_strings":["Fraunhofer Institute for Algorithms and Scientific Computing, Schloss Birlinghoven, 53754 Sankt Augustin, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Fraunhofer Institute for Algorithms and Scientific Computing, Schloss Birlinghoven, 53754 Sankt Augustin, Germany","institution_ids":["https://openalex.org/I4210098248"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021007589","display_name":"Justyna Szostak","orcid":"https://orcid.org/0000-0002-6233-612X"},"institutions":[{"id":"https://openalex.org/I2800621710","display_name":"Philip Morris International (Switzerland)","ror":"https://ror.org/03z9zz970","country_code":"CH","type":"company","lineage":["https://openalex.org/I2800621710","https://openalex.org/I4210088192"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Justyna Szostak","raw_affiliation_strings":["Philip Morris International R&D, Philip Morris Products S.A., Quai Jeanrenaud 5, 2000 Neuchatel, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Philip Morris International R&D, Philip Morris Products S.A., Quai Jeanrenaud 5, 2000 Neuchatel, Switzerland","institution_ids":["https://openalex.org/I2800621710"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009338463","display_name":"Ravikumar Komandur Elayavilli","orcid":null},"institutions":[{"id":"https://openalex.org/I1330342723","display_name":"Mayo Clinic","ror":"https://ror.org/02qp3tb03","country_code":"US","type":"funder","lineage":["https://openalex.org/I1330342723"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ravikumar Komandur Elayavilli","raw_affiliation_strings":["Department of Health Sciences Research, Mayo Clinic, 200 First St. SW, Rochester, MN 55905, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Health Sciences Research, Mayo Clinic, 200 First St. SW, Rochester, MN 55905, USA","institution_ids":["https://openalex.org/I1330342723"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5030771512","display_name":"Richard Tzong\u2010Han Tsai","orcid":"https://orcid.org/0000-0003-0513-107X"},"institutions":[{"id":"https://openalex.org/I22265921","display_name":"National Central University","ror":"https://ror.org/00944ve71","country_code":"TW","type":"education","lineage":["https://openalex.org/I22265921"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Richard Tzong-Han Tsai","raw_affiliation_strings":["Department of Computer Science and Information Engineering, National Central University, Taiwan, R.O.C., Taiwan 320"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Information Engineering, National Central University, Taiwan, R.O.C., Taiwan 320","institution_ids":["https://openalex.org/I22265921"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011914487","display_name":"Mehdi Ali","orcid":"https://orcid.org/0000-0003-1653-3920"},"institutions":[{"id":"https://openalex.org/I135140700","display_name":"University of Bonn","ror":"https://ror.org/041nas322","country_code":"DE","type":"education","lineage":["https://openalex.org/I135140700"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Mehdi Ali","raw_affiliation_strings":["Friedrich Wilhelm University of Bonn, 53012 Bonn, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Friedrich Wilhelm University of Bonn, 53012 Bonn, Germany","institution_ids":["https://openalex.org/I135140700"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006678542","display_name":"Longhua Qian","orcid":null},"institutions":[{"id":"https://openalex.org/I3923682","display_name":"Soochow University","ror":"https://ror.org/05t8y2r12","country_code":"CN","type":"education","lineage":["https://openalex.org/I3923682"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Longhua Qian","raw_affiliation_strings":["NLP Lab, School of Computer Science and Technology, Soochow University, Suzhou, 215006 Suzhou, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"NLP Lab, School of Computer Science and Technology, Soochow University, Suzhou, 215006 Suzhou, China","institution_ids":["https://openalex.org/I3923682"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023661219","display_name":"Majid Rastegar-Mojarad","orcid":"https://orcid.org/0000-0001-6962-3554"},"institutions":[{"id":"https://openalex.org/I1330342723","display_name":"Mayo Clinic","ror":"https://ror.org/02qp3tb03","country_code":"US","type":"funder","lineage":["https://openalex.org/I1330342723"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Majid Rastegar-Mojarad","raw_affiliation_strings":["Department of Health Sciences Research, Mayo Clinic, 200 First St. SW, Rochester, MN 55905, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Health Sciences Research, Mayo Clinic, 200 First St. SW, Rochester, MN 55905, USA","institution_ids":["https://openalex.org/I1330342723"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087038430","display_name":"Julia Hoeng","orcid":"https://orcid.org/0000-0001-5371-6801"},"institutions":[{"id":"https://openalex.org/I2800621710","display_name":"Philip Morris International (Switzerland)","ror":"https://ror.org/03z9zz970","country_code":"CH","type":"company","lineage":["https://openalex.org/I2800621710","https://openalex.org/I4210088192"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Julia Hoeng","raw_affiliation_strings":["Philip Morris International R&D, Philip Morris Products S.A., Quai Jeanrenaud 5, 2000 Neuchatel, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Philip Morris International R&D, Philip Morris Products S.A., Quai Jeanrenaud 5, 2000 Neuchatel, Switzerland","institution_ids":["https://openalex.org/I2800621710"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5077378114","display_name":"Juliane Fluck","orcid":"https://orcid.org/0000-0003-1379-7023"},"institutions":[{"id":"https://openalex.org/I4210098248","display_name":"Fraunhofer Institute for Algorithms and Scientific Computing","ror":"https://ror.org/00trw9c49","country_code":"DE","type":"facility","lineage":["https://openalex.org/I4210098248","https://openalex.org/I4923324"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Juliane Fluck","raw_affiliation_strings":["Fraunhofer Institute for Algorithms and Scientific Computing, Schloss Birlinghoven, 53754 Sankt Augustin, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Fraunhofer Institute for Algorithms and Scientific Computing, Schloss Birlinghoven, 53754 Sankt Augustin, Germany","institution_ids":["https://openalex.org/I4210098248"]}]}],"institutions":[],"countries_distinct_count":5,"institutions_distinct_count":9,"corresponding_author_ids":["https://openalex.org/A5090087547"],"corresponding_institution_ids":["https://openalex.org/I4210098248"],"apc_list":{"value":1415,"currency":"GBP","value_usd":1735},"apc_paid":{"value":1260,"currency":"EUR","value_usd":1358},"fwci":1.1107,"has_fulltext":false,"cited_by_count":18,"citation_normalized_percentile":{"value":0.77771736,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":"2019","issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9753999710083008,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9732999801635742,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8301692008972168},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.7252316474914551},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.6010832786560059},{"id":"https://openalex.org/keywords/task","display_name":"Task (project management)","score":0.5807753801345825},{"id":"https://openalex.org/keywords/representation","display_name":"Representation (politics)","score":0.5589207410812378},{"id":"https://openalex.org/keywords/information-extraction","display_name":"Information extraction","score":0.5385452508926392},{"id":"https://openalex.org/keywords/statement","display_name":"Statement (logic)","score":0.5313587188720703},{"id":"https://openalex.org/keywords/snippet","display_name":"Snippet","score":0.5252037644386292},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.5051875710487366},{"id":"https://openalex.org/keywords/syntax","display_name":"Syntax","score":0.49572527408599854},{"id":"https://openalex.org/keywords/expression","display_name":"Expression (computer science)","score":0.4924107789993286},{"id":"https://openalex.org/keywords/parsing","display_name":"Parsing","score":0.45530906319618225},{"id":"https://openalex.org/keywords/named-entity-recognition","display_name":"Named-entity recognition","score":0.44899529218673706},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3471836447715759},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.14442309737205505},{"id":"https://openalex.org/keywords/linguistics","display_name":"Linguistics","score":0.12622034549713135}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8301692008972168},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.7252316474914551},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6010832786560059},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.5807753801345825},{"id":"https://openalex.org/C2776359362","wikidata":"https://www.wikidata.org/wiki/Q2145286","display_name":"Representation (politics)","level":3,"score":0.5589207410812378},{"id":"https://openalex.org/C195807954","wikidata":"https://www.wikidata.org/wiki/Q1662562","display_name":"Information extraction","level":2,"score":0.5385452508926392},{"id":"https://openalex.org/C2777026412","wikidata":"https://www.wikidata.org/wiki/Q2684591","display_name":"Statement (logic)","level":2,"score":0.5313587188720703},{"id":"https://openalex.org/C2777822670","wikidata":"https://www.wikidata.org/wiki/Q1120538","display_name":"Snippet","level":2,"score":0.5252037644386292},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.5051875710487366},{"id":"https://openalex.org/C60048249","wikidata":"https://www.wikidata.org/wiki/Q37437","display_name":"Syntax","level":2,"score":0.49572527408599854},{"id":"https://openalex.org/C90559484","wikidata":"https://www.wikidata.org/wiki/Q778379","display_name":"Expression (computer science)","level":2,"score":0.4924107789993286},{"id":"https://openalex.org/C186644900","wikidata":"https://www.wikidata.org/wiki/Q194152","display_name":"Parsing","level":2,"score":0.45530906319618225},{"id":"https://openalex.org/C2779135771","wikidata":"https://www.wikidata.org/wiki/Q403574","display_name":"Named-entity recognition","level":3,"score":0.44899529218673706},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3471836447715759},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.14442309737205505},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.12622034549713135},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C94625758","wikidata":"https://www.wikidata.org/wiki/Q7163","display_name":"Politics","level":2,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C187736073","wikidata":"https://www.wikidata.org/wiki/Q2920921","display_name":"Management","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018875","descriptor_name":"Vocabulary, Controlled","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018875","descriptor_name":"Vocabulary, Controlled","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018875","descriptor_name":"Vocabulary, Controlled","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":5,"locations":[{"id":"doi:10.1093/database/baz084","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baz084","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baz084/30131322/baz084.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},{"id":"pmid:31603193","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/31603193","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database : the journal of biological databases and curation","raw_type":null},{"id":"pmh:oai:europepmc.org:5751233","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6787548","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:fraunhofer.de:N-564849","is_oa":true,"landing_page_url":"http://publica.fraunhofer.de/documents/N-564849.html","pdf_url":null,"source":{"id":"https://openalex.org/S4306400801","display_name":"Publikationsdatenbank der Fraunhofer-Gesellschaft (Fraunhofer-Gesellschaft)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4923324","host_organization_name":"Fraunhofer-Gesellschaft","host_organization_lineage":["https://openalex.org/I4923324"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Fraunhofer SCAI","raw_type":"Journal Article"},{"id":"pmh:oai:publica.fraunhofer.de:publica/260144","is_oa":false,"landing_page_url":"https://publica.fraunhofer.de/handle/publica/260144","pdf_url":null,"source":{"id":"https://openalex.org/S4306400318","display_name":"Fraunhofer-Publica (Fraunhofer-Gesellschaft)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4923324","host_organization_name":"Fraunhofer-Gesellschaft","host_organization_lineage":["https://openalex.org/I4923324"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"journal article"}],"best_oa_location":{"id":"doi:10.1093/database/baz084","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baz084","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/baz084/30131322/baz084.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/4","score":0.7699999809265137,"display_name":"Quality Education"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":42,"referenced_works":["https://openalex.org/W181744008","https://openalex.org/W1610821757","https://openalex.org/W1838447392","https://openalex.org/W1963897937","https://openalex.org/W1969709265","https://openalex.org/W1997156282","https://openalex.org/W1997707189","https://openalex.org/W2031249692","https://openalex.org/W2056376052","https://openalex.org/W2096777607","https://openalex.org/W2102388558","https://openalex.org/W2110585365","https://openalex.org/W2117446654","https://openalex.org/W2120890012","https://openalex.org/W2123442489","https://openalex.org/W2141869602","https://openalex.org/W2142016317","https://openalex.org/W2150908245","https://openalex.org/W2151088711","https://openalex.org/W2151949849","https://openalex.org/W2166164789","https://openalex.org/W2169491861","https://openalex.org/W2374459179","https://openalex.org/W2393502053","https://openalex.org/W2401205645","https://openalex.org/W2414378847","https://openalex.org/W2465246611","https://openalex.org/W2466023026","https://openalex.org/W2514231286","https://openalex.org/W2519744449","https://openalex.org/W2528662265","https://openalex.org/W2542020674","https://openalex.org/W2560748602","https://openalex.org/W4229004063","https://openalex.org/W6607301899","https://openalex.org/W6691558778","https://openalex.org/W6719281255","https://openalex.org/W6728098186","https://openalex.org/W6730534866","https://openalex.org/W6757269602","https://openalex.org/W6761817431","https://openalex.org/W6963715516"],"related_works":["https://openalex.org/W2077104824","https://openalex.org/W2168778844","https://openalex.org/W2916255597","https://openalex.org/W3091569222","https://openalex.org/W2999302224","https://openalex.org/W1495833002","https://openalex.org/W2075635421","https://openalex.org/W3006227201","https://openalex.org/W2964631078","https://openalex.org/W4280644284"],"abstract_inverted_index":{"Knowledge":[0],"of":[1,5,59,63,90,103,129,169,191],"the":[2,31,56,84,97,101,107,120,126,137,189,197],"molecular":[3],"interactions":[4],"biological":[6,14,64],"and":[7,10,76,86,114,195,216],"chemical":[8],"entities":[9,200],"their":[11],"involvement":[12],"in":[13,30,33,69,151],"processes":[15],"or":[16],"clinical":[17],"phenotypes":[18],"is":[19,27,39,50,67],"important":[20],"for":[21,41,55,155,188,221],"data":[22,43,113],"interpretation.":[23],"Unfortunately,":[24],"this":[25,161,201],"knowledge":[26,75],"mostly":[28],"embedded":[29],"literature":[32],"such":[34,74],"a":[35,51,60,166,185],"way":[36],"that":[37],"it":[38,78],"unavailable":[40],"automated":[42,93],"analysis":[44],"procedures.":[45],"Biological":[46],"expression":[47],"language":[48],"(BEL)":[49],"syntax":[52],"representation":[53,58],"allowing":[54],"structured":[57],"broad":[61],"range":[62],"relationships.":[65,132],"It":[66],"used":[68],"various":[70],"situations":[71],"to":[72,118,124,203],"extract":[73],"transform":[77],"into":[79],"BEL":[80,98,108,131,139,163,170,193,222],"networks.":[81],"To":[82],"support":[83],"tedious":[85],"time-intensive":[87],"extraction":[88,128,172,190],"work":[89],"curators":[91],"with":[92,143,196],"methods,":[94],"we":[95,110],"developed":[96],"track":[99,140],"within":[100],"framework":[102],"BioCreative":[104,135],"Challenges.":[105],"Within":[106],"track,":[109],"provide":[111],"training":[112],"an":[115],"evaluation":[116],"environment":[117],"encourage":[119],"text":[121,152],"mining":[122],"community":[123],"tackle":[125],"automatic":[127],"complex":[130],"In":[133],"2017":[134],"VI,":[136],"2015":[138],"was":[141],"repeated":[142],"new":[144,210],"test":[145],"data.":[146],"Although":[147],"only":[148],"minor":[149],"improvements":[150],"snippet":[153],"retrieval":[154],"given":[156,198],"statements":[157,194],"were":[158,219],"achieved":[159],"during":[160],"second":[162],"task":[164],"iteration,":[165],"significant":[167],"increase":[168],"statement":[171,223],"performance":[173],"from":[174],"provided":[175],"sentences":[176],"could":[177],"be":[178],"seen.":[179],"The":[180],"best":[181],"performing":[182],"system":[183],"reached":[184],"32%":[186],"F-score":[187],"complete":[192],"named":[199],"increased":[202],"49%.":[204],"This":[205],"time,":[206],"besides":[207],"rule-based":[208],"systems,":[209],"methods":[211],"involving":[212],"hierarchical":[213],"sequence":[214],"labeling":[215],"neural":[217],"networks":[218],"applied":[220],"extraction.":[224]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":4},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":7},{"year":2020,"cited_by_count":4}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}
