{"id":"https://openalex.org/W2945569680","doi":"https://doi.org/10.1093/database/baz054","title":"Chemical\u2013protein interaction extraction via contextualized word representations and multihead attention","display_name":"Chemical\u2013protein interaction extraction via contextualized word representations and multihead attention","publication_year":2019,"publication_date":"2019-01-01","ids":{"openalex":"https://openalex.org/W2945569680","doi":"https://doi.org/10.1093/database/baz054","mag":"2945569680","pmid":"https://pubmed.ncbi.nlm.nih.gov/31125403"},"language":"en","primary_location":{"id":"doi:10.1093/database/baz054","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baz054","pdf_url":"https://watermark.silverchair.com/baz054.pdf?token=AQECAHi208BE49Ooan9kkhW_Ercy7Dm3ZL_9Cf3qfKAc485ysgAAAswwggLIBgkqhkiG9w0BBwagggK5MIICtQIBADCCAq4GCSqGSIb3DQEHATAeBglghkgBZQMEAS4wEQQMAb5HYNGiv3rPeAOqAgEQgIICf-sUgY6_Tj7fX1CmS5RHQrmx82Yuu2DfK41UO8y2BmDtr_XgKoqaAy0BOaA5Fbt6NuFRSVqbmsOp4TfkKbiRJIAREmYJXDhZVhRVSujOw3LRI__mLF-8TNXPqa06CLosvjkQ6RlApppFHS0mfWAT5N-gNWjtvAxeQw9BTVGinkocRQj5mO22vhuRYEOuSVvwa9u1iokO-bQYCNaJ0SJ3ZCGbO7XfvCHZmmr-z2NAmI1_kcp38xVrQxljZ96RWqDpkQeSEpxGL2STXALOm3ps5kpPBKWZna5FjcwphLE2Q1Vq6BfjG2HjRTWTGo_Ze-kjvFkd4RzhIVtYKFMKVD2mZQoqRC-0mWIjm5SsZ_Iz2mLDf0gyREg7E23GIGrpEPLVIb13p1MpYQbuDx1eVVTjdfNGsKj8kLl2yfuiVGjDWm9D1XmKe95pij5vXyhy0gOYJI36gz-p8QnWQBdG7zulwUzy0Wb1irQBE_R_z641Y8km5iWlPcrf-9PzNP3aodW_yGWw2FsTShe-7d1flNgsGVzjMp4teGhL58BLon6qWHSgJAJTdJnMddKXLWd0-VYhxLEOy9qxocQpPudYf-KkN2uo3z0lxZiU8EC04WzKN84etJhpQGtsg4RiBJ1p4ERWtEfb4WUA2DyYXVGgpO3LgDEvpPRAyRWc2OKquE9Z68G1eqLWBoXuAcmH1cqs91p23TP-UJE7mRHPgfSQX6KDtflv1CI7O_ZkomrnEFuNJnEAHdJmT8YajKfpBw_YgPaYtLDainzWt56E99SCJlsTtajyBPa_eRswitex-YM3jTw2NnzgI0Jttg8gGnsrx7NMI4xNmj-hnPXNsPjDUR4ZRg","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://watermark.silverchair.com/baz054.pdf?token=AQECAHi208BE49Ooan9kkhW_Ercy7Dm3ZL_9Cf3qfKAc485ysgAAAswwggLIBgkqhkiG9w0BBwagggK5MIICtQIBADCCAq4GCSqGSIb3DQEHATAeBglghkgBZQMEAS4wEQQMAb5HYNGiv3rPeAOqAgEQgIICf-sUgY6_Tj7fX1CmS5RHQrmx82Yuu2DfK41UO8y2BmDtr_XgKoqaAy0BOaA5Fbt6NuFRSVqbmsOp4TfkKbiRJIAREmYJXDhZVhRVSujOw3LRI__mLF-8TNXPqa06CLosvjkQ6RlApppFHS0mfWAT5N-gNWjtvAxeQw9BTVGinkocRQj5mO22vhuRYEOuSVvwa9u1iokO-bQYCNaJ0SJ3ZCGbO7XfvCHZmmr-z2NAmI1_kcp38xVrQxljZ96RWqDpkQeSEpxGL2STXALOm3ps5kpPBKWZna5FjcwphLE2Q1Vq6BfjG2HjRTWTGo_Ze-kjvFkd4RzhIVtYKFMKVD2mZQoqRC-0mWIjm5SsZ_Iz2mLDf0gyREg7E23GIGrpEPLVIb13p1MpYQbuDx1eVVTjdfNGsKj8kLl2yfuiVGjDWm9D1XmKe95pij5vXyhy0gOYJI36gz-p8QnWQBdG7zulwUzy0Wb1irQBE_R_z641Y8km5iWlPcrf-9PzNP3aodW_yGWw2FsTShe-7d1flNgsGVzjMp4teGhL58BLon6qWHSgJAJTdJnMddKXLWd0-VYhxLEOy9qxocQpPudYf-KkN2uo3z0lxZiU8EC04WzKN84etJhpQGtsg4RiBJ1p4ERWtEfb4WUA2DyYXVGgpO3LgDEvpPRAyRWc2OKquE9Z68G1eqLWBoXuAcmH1cqs91p23TP-UJE7mRHPgfSQX6KDtflv1CI7O_ZkomrnEFuNJnEAHdJmT8YajKfpBw_YgPaYtLDainzWt56E99SCJlsTtajyBPa_eRswitex-YM3jTw2NnzgI0Jttg8gGnsrx7NMI4xNmj-hnPXNsPjDUR4ZRg","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5046020427","display_name":"Yijia Zhang","orcid":"https://orcid.org/0000-0002-5843-4675"},"institutions":[{"id":"https://openalex.org/I27357992","display_name":"Dalian University of Technology","ror":"https://ror.org/023hj5876","country_code":"CN","type":"education","lineage":["https://openalex.org/I27357992"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Yijia Zhang","raw_affiliation_strings":["College of Computer Science and Technology, Dalian University of Technology, Dalian, China"],"raw_orcid":"https://orcid.org/0000-0002-5843-4675","affiliations":[{"raw_affiliation_string":"College of Computer Science and Technology, Dalian University of Technology, Dalian, China","institution_ids":["https://openalex.org/I27357992"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023931221","display_name":"Hongfei Lin","orcid":"https://orcid.org/0000-0003-0872-7688"},"institutions":[{"id":"https://openalex.org/I27357992","display_name":"Dalian University of Technology","ror":"https://ror.org/023hj5876","country_code":"CN","type":"education","lineage":["https://openalex.org/I27357992"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hongfei Lin","raw_affiliation_strings":["College of Computer Science and Technology, Dalian University of Technology, Dalian, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Computer Science and Technology, Dalian University of Technology, Dalian, China","institution_ids":["https://openalex.org/I27357992"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051597671","display_name":"Zhihao Yang","orcid":"https://orcid.org/0000-0001-6186-2024"},"institutions":[{"id":"https://openalex.org/I27357992","display_name":"Dalian University of Technology","ror":"https://ror.org/023hj5876","country_code":"CN","type":"education","lineage":["https://openalex.org/I27357992"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhihao Yang","raw_affiliation_strings":["College of Computer Science and Technology, Dalian University of Technology, Dalian, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Computer Science and Technology, Dalian University of Technology, Dalian, China","institution_ids":["https://openalex.org/I27357992"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100370452","display_name":"Jian Wang","orcid":"https://orcid.org/0000-0002-4656-7446"},"institutions":[{"id":"https://openalex.org/I27357992","display_name":"Dalian University of Technology","ror":"https://ror.org/023hj5876","country_code":"CN","type":"education","lineage":["https://openalex.org/I27357992"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jian Wang","raw_affiliation_strings":["College of Computer Science and Technology, Dalian University of Technology, Dalian, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Computer Science and Technology, Dalian University of Technology, Dalian, China","institution_ids":["https://openalex.org/I27357992"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5101472979","display_name":"Yuanyuan Sun","orcid":"https://orcid.org/0000-0003-2805-5911"},"institutions":[{"id":"https://openalex.org/I27357992","display_name":"Dalian University of Technology","ror":"https://ror.org/023hj5876","country_code":"CN","type":"education","lineage":["https://openalex.org/I27357992"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yuanyuan Sun","raw_affiliation_strings":["College of Computer Science and Technology, Dalian University of Technology, Dalian, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Computer Science and Technology, Dalian University of Technology, Dalian, China","institution_ids":["https://openalex.org/I27357992"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5046020427"],"corresponding_institution_ids":["https://openalex.org/I27357992"],"apc_list":{"value":1415,"currency":"GBP","value_usd":1735},"apc_paid":{"value":1415,"currency":"GBP","value_usd":1735},"fwci":0.9943,"has_fulltext":false,"cited_by_count":22,"citation_normalized_percentile":{"value":0.75093261,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":"2019","issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9952999949455261,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9945999979972839,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.9059411287307739},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.7128630876541138},{"id":"https://openalex.org/keywords/sentence","display_name":"Sentence","score":0.698349118232727},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.6344623565673828},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.6290242671966553},{"id":"https://openalex.org/keywords/deep-learning","display_name":"Deep learning","score":0.5864050984382629},{"id":"https://openalex.org/keywords/representation","display_name":"Representation (politics)","score":0.5286173224449158},{"id":"https://openalex.org/keywords/word","display_name":"Word (group theory)","score":0.51788330078125},{"id":"https://openalex.org/keywords/task","display_name":"Task (project management)","score":0.4612845778465271},{"id":"https://openalex.org/keywords/feature","display_name":"Feature (linguistics)","score":0.44653549790382385},{"id":"https://openalex.org/keywords/linguistics","display_name":"Linguistics","score":0.11689421534538269}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.9059411287307739},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.7128630876541138},{"id":"https://openalex.org/C2777530160","wikidata":"https://www.wikidata.org/wiki/Q41796","display_name":"Sentence","level":2,"score":0.698349118232727},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.6344623565673828},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.6290242671966553},{"id":"https://openalex.org/C108583219","wikidata":"https://www.wikidata.org/wiki/Q197536","display_name":"Deep learning","level":2,"score":0.5864050984382629},{"id":"https://openalex.org/C2776359362","wikidata":"https://www.wikidata.org/wiki/Q2145286","display_name":"Representation (politics)","level":3,"score":0.5286173224449158},{"id":"https://openalex.org/C90805587","wikidata":"https://www.wikidata.org/wiki/Q10944557","display_name":"Word (group theory)","level":2,"score":0.51788330078125},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.4612845778465271},{"id":"https://openalex.org/C2776401178","wikidata":"https://www.wikidata.org/wiki/Q12050496","display_name":"Feature (linguistics)","level":2,"score":0.44653549790382385},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.11689421534538269},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C187736073","wikidata":"https://www.wikidata.org/wiki/Q2920921","display_name":"Management","level":1,"score":0.0},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0},{"id":"https://openalex.org/C94625758","wikidata":"https://www.wikidata.org/wiki/Q7163","display_name":"Politics","level":2,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D062126","descriptor_name":"Databases, Chemical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D062126","descriptor_name":"Databases, Chemical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D062126","descriptor_name":"Databases, Chemical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/database/baz054","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baz054","pdf_url":"https://watermark.silverchair.com/baz054.pdf?token=AQECAHi208BE49Ooan9kkhW_Ercy7Dm3ZL_9Cf3qfKAc485ysgAAAswwggLIBgkqhkiG9w0BBwagggK5MIICtQIBADCCAq4GCSqGSIb3DQEHATAeBglghkgBZQMEAS4wEQQMAb5HYNGiv3rPeAOqAgEQgIICf-sUgY6_Tj7fX1CmS5RHQrmx82Yuu2DfK41UO8y2BmDtr_XgKoqaAy0BOaA5Fbt6NuFRSVqbmsOp4TfkKbiRJIAREmYJXDhZVhRVSujOw3LRI__mLF-8TNXPqa06CLosvjkQ6RlApppFHS0mfWAT5N-gNWjtvAxeQw9BTVGinkocRQj5mO22vhuRYEOuSVvwa9u1iokO-bQYCNaJ0SJ3ZCGbO7XfvCHZmmr-z2NAmI1_kcp38xVrQxljZ96RWqDpkQeSEpxGL2STXALOm3ps5kpPBKWZna5FjcwphLE2Q1Vq6BfjG2HjRTWTGo_Ze-kjvFkd4RzhIVtYKFMKVD2mZQoqRC-0mWIjm5SsZ_Iz2mLDf0gyREg7E23GIGrpEPLVIb13p1MpYQbuDx1eVVTjdfNGsKj8kLl2yfuiVGjDWm9D1XmKe95pij5vXyhy0gOYJI36gz-p8QnWQBdG7zulwUzy0Wb1irQBE_R_z641Y8km5iWlPcrf-9PzNP3aodW_yGWw2FsTShe-7d1flNgsGVzjMp4teGhL58BLon6qWHSgJAJTdJnMddKXLWd0-VYhxLEOy9qxocQpPudYf-KkN2uo3z0lxZiU8EC04WzKN84etJhpQGtsg4RiBJ1p4ERWtEfb4WUA2DyYXVGgpO3LgDEvpPRAyRWc2OKquE9Z68G1eqLWBoXuAcmH1cqs91p23TP-UJE7mRHPgfSQX6KDtflv1CI7O_ZkomrnEFuNJnEAHdJmT8YajKfpBw_YgPaYtLDainzWt56E99SCJlsTtajyBPa_eRswitex-YM3jTw2NnzgI0Jttg8gGnsrx7NMI4xNmj-hnPXNsPjDUR4ZRg","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},{"id":"pmid:31125403","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/31125403","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database : the journal of biological databases and curation","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:6534182","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6534182","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Database (Oxford)","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/database/baz054","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/baz054","pdf_url":"https://watermark.silverchair.com/baz054.pdf?token=AQECAHi208BE49Ooan9kkhW_Ercy7Dm3ZL_9Cf3qfKAc485ysgAAAswwggLIBgkqhkiG9w0BBwagggK5MIICtQIBADCCAq4GCSqGSIb3DQEHATAeBglghkgBZQMEAS4wEQQMAb5HYNGiv3rPeAOqAgEQgIICf-sUgY6_Tj7fX1CmS5RHQrmx82Yuu2DfK41UO8y2BmDtr_XgKoqaAy0BOaA5Fbt6NuFRSVqbmsOp4TfkKbiRJIAREmYJXDhZVhRVSujOw3LRI__mLF-8TNXPqa06CLosvjkQ6RlApppFHS0mfWAT5N-gNWjtvAxeQw9BTVGinkocRQj5mO22vhuRYEOuSVvwa9u1iokO-bQYCNaJ0SJ3ZCGbO7XfvCHZmmr-z2NAmI1_kcp38xVrQxljZ96RWqDpkQeSEpxGL2STXALOm3ps5kpPBKWZna5FjcwphLE2Q1Vq6BfjG2HjRTWTGo_Ze-kjvFkd4RzhIVtYKFMKVD2mZQoqRC-0mWIjm5SsZ_Iz2mLDf0gyREg7E23GIGrpEPLVIb13p1MpYQbuDx1eVVTjdfNGsKj8kLl2yfuiVGjDWm9D1XmKe95pij5vXyhy0gOYJI36gz-p8QnWQBdG7zulwUzy0Wb1irQBE_R_z641Y8km5iWlPcrf-9PzNP3aodW_yGWw2FsTShe-7d1flNgsGVzjMp4teGhL58BLon6qWHSgJAJTdJnMddKXLWd0-VYhxLEOy9qxocQpPudYf-KkN2uo3z0lxZiU8EC04WzKN84etJhpQGtsg4RiBJ1p4ERWtEfb4WUA2DyYXVGgpO3LgDEvpPRAyRWc2OKquE9Z68G1eqLWBoXuAcmH1cqs91p23TP-UJE7mRHPgfSQX6KDtflv1CI7O_ZkomrnEFuNJnEAHdJmT8YajKfpBw_YgPaYtLDainzWt56E99SCJlsTtajyBPa_eRswitex-YM3jTw2NnzgI0Jttg8gGnsrx7NMI4xNmj-hnPXNsPjDUR4ZRg","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/4","display_name":"Quality Education","score":0.8199999928474426}],"awards":[{"id":"https://openalex.org/G1806967397","display_name":null,"funder_award_id":"DUT17JC42","funder_id":"https://openalex.org/F4320335787","funder_display_name":"Fundamental Research Funds for the Central Universities"}],"funders":[{"id":"https://openalex.org/F4320335787","display_name":"Fundamental Research Funds for the Central Universities","ror":null}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":38,"referenced_works":["https://openalex.org/W1986704581","https://openalex.org/W2016043834","https://openalex.org/W2060888586","https://openalex.org/W2064675550","https://openalex.org/W2095705004","https://openalex.org/W2133564696","https://openalex.org/W2135186741","https://openalex.org/W2135192531","https://openalex.org/W2166111585","https://openalex.org/W2170189740","https://openalex.org/W2250539671","https://openalex.org/W2279376656","https://openalex.org/W2481850016","https://openalex.org/W2485374661","https://openalex.org/W2515248967","https://openalex.org/W2560748602","https://openalex.org/W2584239330","https://openalex.org/W2593713917","https://openalex.org/W2600659824","https://openalex.org/W2765742249","https://openalex.org/W2792864647","https://openalex.org/W2792932412","https://openalex.org/W2795129839","https://openalex.org/W2883380892","https://openalex.org/W2883749461","https://openalex.org/W2895889524","https://openalex.org/W2896378533","https://openalex.org/W2964026782","https://openalex.org/W2964072386","https://openalex.org/W2964308564","https://openalex.org/W6636510571","https://openalex.org/W6649622836","https://openalex.org/W6674330103","https://openalex.org/W6679434410","https://openalex.org/W6737001699","https://openalex.org/W6739901393","https://openalex.org/W6748602928","https://openalex.org/W6748634344"],"related_works":["https://openalex.org/W4375867731","https://openalex.org/W2375873920","https://openalex.org/W2146114872","https://openalex.org/W2392060890","https://openalex.org/W2392760275","https://openalex.org/W2611989081","https://openalex.org/W2083530853","https://openalex.org/W2009831055","https://openalex.org/W2393172683","https://openalex.org/W3211744874"],"abstract_inverted_index":{"A":[0],"rich":[1],"source":[2],"of":[3,17,135,181],"chemical-protein":[4],"interactions":[5],"(CPIs)":[6],"is":[7,19,162],"locked":[8],"in":[9,23,47,55,208],"the":[10,67,76,86,94,136,178,182,190],"exponentially":[11],"growing":[12],"biomedical":[13,24],"literature.":[14],"Automatic":[15],"extraction":[16,122],"CPIs":[18],"a":[20,106,116,140,145,154],"crucial":[21],"task":[22],"natural":[25],"language":[26],"processing":[27],"(NLP),":[28],"which":[29],"has":[30,66],"great":[31],"benefits":[32],"for":[33,120,170],"pharmacological":[34],"and":[35,41,50,92,102,128,153,203],"clinical":[36],"research.":[37],"Deep":[38],"context":[39,64,100,126,142,160,201],"representation":[40,65,73,101,127,143,161,202],"multihead":[42,80,103,129,155,173,204],"attention":[43,81,104,156,174,205],"are":[44,206],"recent":[45],"developments":[46],"deep":[48,63,99,117,125,141,159,200],"learning":[49],"have":[51],"shown":[52],"their":[53],"potential":[54],"some":[56],"NLP":[57],"tasks.":[58],"Unlike":[59],"traditional":[60],"word":[61],"embedding,":[62],"ability":[68],"to":[69,164],"generate":[70],"comprehensive":[71,167],"sentence":[72,77],"based":[74,123],"on":[75,124,189,219],"context.":[78],"The":[79,158,172],"mechanism":[82],"can":[83,175,213],"effectively":[84,176],"learn":[85],"important":[87,96,179],"features":[88],"from":[89],"different":[90],"heads":[91],"emphasize":[93,177],"relatively":[95],"features.":[97],"Integrating":[98],"with":[105,215],"neural":[107,118],"network-based":[108],"model":[109,119,132],"may":[110],"improve":[111],"CPI":[112,121,209],"extraction.":[113,210],"We":[114,185],"present":[115],"attention.":[130],"Our":[131,211],"mainly":[133],"consists":[134],"following":[137],"three":[138],"parts:":[139],"layer,":[144],"bidirectional":[146],"long":[147],"short-term":[148],"memory":[149],"networks":[150],"(Bi-LSTMs)":[151],"layer":[152],"layer.":[157],"employed":[163],"provide":[165],"more":[166],"feature":[168],"input":[169],"Bi-LSTMs.":[171],"part":[180],"Bi-LSTMs":[183],"output.":[184],"evaluated":[186],"our":[187],"method":[188,212],"public":[191],"ChemProt":[192,220],"corpus.":[193,221],"These":[194],"experimental":[195],"results":[196],"show":[197],"that":[198],"both":[199],"helpful":[207],"compete":[214],"other":[216],"state-of-the-art":[217],"methods":[218]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":5},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":6},{"year":2019,"cited_by_count":1}],"updated_date":"2026-05-19T21:40:30.786675","created_date":"2025-10-10T00:00:00"}
