{"id":"https://openalex.org/W2949333191","doi":"https://doi.org/10.1093/database/bay126","title":"BEL Commons: an environment for exploration and analysis of networks encoded in Biological Expression Language","display_name":"BEL Commons: an environment for exploration and analysis of networks encoded in Biological Expression Language","publication_year":2018,"publication_date":"2018-01-01","ids":{"openalex":"https://openalex.org/W2949333191","doi":"https://doi.org/10.1093/database/bay126","mag":"2949333191","pmid":"https://pubmed.ncbi.nlm.nih.gov/30576488"},"language":"en","primary_location":{"id":"doi:10.1093/database/bay126","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/bay126","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bay126/27329313/bay126.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bay126/27329313/bay126.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5065488553","display_name":"Charles Tapley Hoyt","orcid":"https://orcid.org/0000-0003-4423-4370"},"institutions":[{"id":"https://openalex.org/I135140700","display_name":"University of Bonn","ror":"https://ror.org/041nas322","country_code":"DE","type":"education","lineage":["https://openalex.org/I135140700"]},{"id":"https://openalex.org/I4210098248","display_name":"Fraunhofer Institute for Algorithms and Scientific Computing","ror":"https://ror.org/00trw9c49","country_code":"DE","type":"facility","lineage":["https://openalex.org/I4210098248","https://openalex.org/I4923324"]},{"id":"https://openalex.org/I4210164149","display_name":"Bonn Aachen International Center for Information Technology","ror":"https://ror.org/054zhq066","country_code":"DE","type":"facility","lineage":["https://openalex.org/I135140700","https://openalex.org/I155417937","https://openalex.org/I4210164149","https://openalex.org/I4923324"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Charles Tapley Hoyt","raw_affiliation_strings":["Bonn-Aachen International Center for IT, Rheinische Friedrich-Wilhelms-Universit\u00e4t Bonn, Bonn, Germany","Department of Bioinformatics, Fraunhofer Institute for Algorithms and Scientific Computing, Sankt Augustin, Germany"],"raw_orcid":"https://orcid.org/0000-0003-4423-4370","affiliations":[{"raw_affiliation_string":"Bonn-Aachen International Center for IT, Rheinische Friedrich-Wilhelms-Universit\u00e4t Bonn, Bonn, Germany","institution_ids":["https://openalex.org/I135140700","https://openalex.org/I4210164149"]},{"raw_affiliation_string":"Department of Bioinformatics, Fraunhofer Institute for Algorithms and Scientific Computing, Sankt Augustin, Germany","institution_ids":["https://openalex.org/I4210098248"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043459521","display_name":"Daniel Domingo\u2010Fern\u00e1nd\u00e9z","orcid":"https://orcid.org/0000-0002-2046-6145"},"institutions":[{"id":"https://openalex.org/I135140700","display_name":"University of Bonn","ror":"https://ror.org/041nas322","country_code":"DE","type":"education","lineage":["https://openalex.org/I135140700"]},{"id":"https://openalex.org/I4210098248","display_name":"Fraunhofer Institute for Algorithms and Scientific Computing","ror":"https://ror.org/00trw9c49","country_code":"DE","type":"facility","lineage":["https://openalex.org/I4210098248","https://openalex.org/I4923324"]},{"id":"https://openalex.org/I4210164149","display_name":"Bonn Aachen International Center for Information Technology","ror":"https://ror.org/054zhq066","country_code":"DE","type":"facility","lineage":["https://openalex.org/I135140700","https://openalex.org/I155417937","https://openalex.org/I4210164149","https://openalex.org/I4923324"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Daniel Domingo-Fern\u00e1ndez","raw_affiliation_strings":["Bonn-Aachen International Center for IT, Rheinische Friedrich-Wilhelms-Universit\u00e4t Bonn, Bonn, Germany","Department of Bioinformatics, Fraunhofer Institute for Algorithms and Scientific Computing, Sankt Augustin, Germany"],"raw_orcid":"https://orcid.org/0000-0002-2046-6145","affiliations":[{"raw_affiliation_string":"Bonn-Aachen International Center for IT, Rheinische Friedrich-Wilhelms-Universit\u00e4t Bonn, Bonn, Germany","institution_ids":["https://openalex.org/I135140700","https://openalex.org/I4210164149"]},{"raw_affiliation_string":"Department of Bioinformatics, Fraunhofer Institute for Algorithms and Scientific Computing, Sankt Augustin, Germany","institution_ids":["https://openalex.org/I4210098248"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5003139478","display_name":"Martin Hofmann\u2010Apitius","orcid":"https://orcid.org/0000-0001-9012-6720"},"institutions":[{"id":"https://openalex.org/I135140700","display_name":"University of Bonn","ror":"https://ror.org/041nas322","country_code":"DE","type":"education","lineage":["https://openalex.org/I135140700"]},{"id":"https://openalex.org/I4210098248","display_name":"Fraunhofer Institute for Algorithms and Scientific Computing","ror":"https://ror.org/00trw9c49","country_code":"DE","type":"facility","lineage":["https://openalex.org/I4210098248","https://openalex.org/I4923324"]},{"id":"https://openalex.org/I4210164149","display_name":"Bonn Aachen International Center for Information Technology","ror":"https://ror.org/054zhq066","country_code":"DE","type":"facility","lineage":["https://openalex.org/I135140700","https://openalex.org/I155417937","https://openalex.org/I4210164149","https://openalex.org/I4923324"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Martin Hofmann-Apitius","raw_affiliation_strings":["Bonn-Aachen International Center for IT, Rheinische Friedrich-Wilhelms-Universit\u00e4t Bonn, Bonn, Germany","Department of Bioinformatics, Fraunhofer Institute for Algorithms and Scientific Computing, Sankt Augustin, Germany"],"raw_orcid":"https://orcid.org/0000-0001-9012-6720","affiliations":[{"raw_affiliation_string":"Bonn-Aachen International Center for IT, Rheinische Friedrich-Wilhelms-Universit\u00e4t Bonn, Bonn, Germany","institution_ids":["https://openalex.org/I135140700","https://openalex.org/I4210164149"]},{"raw_affiliation_string":"Department of Bioinformatics, Fraunhofer Institute for Algorithms and Scientific Computing, Sankt Augustin, Germany","institution_ids":["https://openalex.org/I4210098248"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5065488553"],"corresponding_institution_ids":["https://openalex.org/I135140700","https://openalex.org/I4210098248","https://openalex.org/I4210164149"],"apc_list":{"value":1415,"currency":"GBP","value_usd":1735},"apc_paid":{"value":1415,"currency":"GBP","value_usd":1735},"fwci":0.9887,"has_fulltext":false,"cited_by_count":18,"citation_normalized_percentile":{"value":0.75456727,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":99},"biblio":{"volume":"2018","issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9901000261306763,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9876999855041504,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8188033103942871},{"id":"https://openalex.org/keywords/upload","display_name":"Upload","score":0.7227147221565247},{"id":"https://openalex.org/keywords/parsing","display_name":"Parsing","score":0.6282748579978943},{"id":"https://openalex.org/keywords/wizard","display_name":"Wizard","score":0.6200708746910095},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.6073331832885742},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.5809929370880127},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.45525750517845154},{"id":"https://openalex.org/keywords/biological-network","display_name":"Biological network","score":0.4533396065235138},{"id":"https://openalex.org/keywords/interface","display_name":"Interface (matter)","score":0.4102981686592102},{"id":"https://openalex.org/keywords/human\u2013computer-interaction","display_name":"Human\u2013computer interaction","score":0.3250006437301636},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.17993587255477905},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.09907373785972595}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8188033103942871},{"id":"https://openalex.org/C71901391","wikidata":"https://www.wikidata.org/wiki/Q7126699","display_name":"Upload","level":2,"score":0.7227147221565247},{"id":"https://openalex.org/C186644900","wikidata":"https://www.wikidata.org/wiki/Q194152","display_name":"Parsing","level":2,"score":0.6282748579978943},{"id":"https://openalex.org/C2776784076","wikidata":"https://www.wikidata.org/wiki/Q580334","display_name":"Wizard","level":2,"score":0.6200708746910095},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.6073331832885742},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.5809929370880127},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.45525750517845154},{"id":"https://openalex.org/C28225019","wikidata":"https://www.wikidata.org/wiki/Q4915005","display_name":"Biological network","level":2,"score":0.4533396065235138},{"id":"https://openalex.org/C113843644","wikidata":"https://www.wikidata.org/wiki/Q901882","display_name":"Interface (matter)","level":4,"score":0.4102981686592102},{"id":"https://openalex.org/C107457646","wikidata":"https://www.wikidata.org/wiki/Q207434","display_name":"Human\u2013computer interaction","level":1,"score":0.3250006437301636},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.17993587255477905},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.09907373785972595},{"id":"https://openalex.org/C129307140","wikidata":"https://www.wikidata.org/wiki/Q6795880","display_name":"Maximum bubble pressure method","level":3,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C173608175","wikidata":"https://www.wikidata.org/wiki/Q232661","display_name":"Parallel computing","level":1,"score":0.0},{"id":"https://openalex.org/C157915830","wikidata":"https://www.wikidata.org/wiki/Q2928001","display_name":"Bubble","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015398","descriptor_name":"Signal Transduction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015398","descriptor_name":"Signal Transduction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015398","descriptor_name":"Signal Transduction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1093/database/bay126","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/bay126","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bay126/27329313/bay126.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},{"id":"pmid:30576488","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/30576488","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database : the journal of biological databases and curation","raw_type":null},{"id":"pmh:oai:europepmc.org:5276509","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6301338","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:fraunhofer.de:N-564988","is_oa":true,"landing_page_url":"http://publica.fraunhofer.de/documents/N-564988.html","pdf_url":null,"source":{"id":"https://openalex.org/S4306400318","display_name":"Fraunhofer-Publica (Fraunhofer-Gesellschaft)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4923324","host_organization_name":"Fraunhofer-Gesellschaft","host_organization_lineage":["https://openalex.org/I4923324"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Fraunhofer SCAI","raw_type":"article"},{"id":"pmh:oai:publica.fraunhofer.de:publica/259900","is_oa":true,"landing_page_url":"https://publica.fraunhofer.de/handle/publica/259900","pdf_url":null,"source":{"id":"https://openalex.org/S4306400318","display_name":"Fraunhofer-Publica (Fraunhofer-Gesellschaft)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4923324","host_organization_name":"Fraunhofer-Gesellschaft","host_organization_lineage":["https://openalex.org/I4923324"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"journal article"}],"best_oa_location":{"id":"doi:10.1093/database/bay126","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/bay126","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bay126/27329313/bay126.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1816994784","display_name":null,"funder_award_id":"FP7/2007-2013","funder_id":"https://openalex.org/F4320333065","funder_display_name":"Seventh Framework Programme"},{"id":"https://openalex.org/G6002116566","display_name":null,"funder_award_id":"115568","funder_id":"https://openalex.org/F4320314178","funder_display_name":"European Federation of Pharmaceutical Industries and Associations"}],"funders":[{"id":"https://openalex.org/F4320314178","display_name":"European Federation of Pharmaceutical Industries and Associations","ror":"https://ror.org/00g1x4v36"},{"id":"https://openalex.org/F4320333065","display_name":"Seventh Framework Programme","ror":null}],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2949333191.pdf"},"referenced_works_count":71,"referenced_works":["https://openalex.org/W1871096589","https://openalex.org/W1871852719","https://openalex.org/W1969709265","https://openalex.org/W1982226428","https://openalex.org/W1989842786","https://openalex.org/W1997838879","https://openalex.org/W1999758530","https://openalex.org/W2010457001","https://openalex.org/W2050978103","https://openalex.org/W2052947212","https://openalex.org/W2060871034","https://openalex.org/W2061425021","https://openalex.org/W2068109876","https://openalex.org/W2069157810","https://openalex.org/W2069435157","https://openalex.org/W2071877188","https://openalex.org/W2087367508","https://openalex.org/W2088891952","https://openalex.org/W2097948046","https://openalex.org/W2100980426","https://openalex.org/W2107580398","https://openalex.org/W2112651905","https://openalex.org/W2118258530","https://openalex.org/W2120890012","https://openalex.org/W2122139846","https://openalex.org/W2125004669","https://openalex.org/W2130410032","https://openalex.org/W2132022337","https://openalex.org/W2137450588","https://openalex.org/W2137476611","https://openalex.org/W2140601463","https://openalex.org/W2140611297","https://openalex.org/W2143829202","https://openalex.org/W2159675211","https://openalex.org/W2163411228","https://openalex.org/W2164298117","https://openalex.org/W2179127114","https://openalex.org/W2251392452","https://openalex.org/W2374459179","https://openalex.org/W2393502053","https://openalex.org/W2462137239","https://openalex.org/W2516150684","https://openalex.org/W2528662265","https://openalex.org/W2534303219","https://openalex.org/W2543238710","https://openalex.org/W2557496587","https://openalex.org/W2559482520","https://openalex.org/W2559588208","https://openalex.org/W2604808360","https://openalex.org/W2605218377","https://openalex.org/W2626440326","https://openalex.org/W2626562392","https://openalex.org/W2656695974","https://openalex.org/W2745929478","https://openalex.org/W2748847540","https://openalex.org/W2766482558","https://openalex.org/W2767546566","https://openalex.org/W2767914218","https://openalex.org/W2915806464","https://openalex.org/W2916475656","https://openalex.org/W2951651936","https://openalex.org/W2952755768","https://openalex.org/W4205277549","https://openalex.org/W4231917197","https://openalex.org/W4237381349","https://openalex.org/W6650248870","https://openalex.org/W6668471642","https://openalex.org/W6674852298","https://openalex.org/W6679191575","https://openalex.org/W6764249749","https://openalex.org/W7045404166"],"related_works":["https://openalex.org/W4252778556","https://openalex.org/W2512851574","https://openalex.org/W2518183033","https://openalex.org/W632607340","https://openalex.org/W186449456","https://openalex.org/W2349025816","https://openalex.org/W1504394863","https://openalex.org/W1593330147","https://openalex.org/W2385143609","https://openalex.org/W4255205518"],"abstract_inverted_index":{"The":[0],"rapid":[1],"accumulation":[2],"of":[3,8,52,130,160],"knowledge":[4,73,161],"in":[5,79,89],"the":[6,80,113,127],"field":[7],"systems":[9],"and":[10,20,49,57,96,107,133,136],"networks":[11,77,111,135,162],"biology":[12],"during":[13],"recent":[14],"years":[15],"requires":[16],"complex,":[17],"but":[18],"user-friendly":[19],"accessible":[21],"web":[22,34],"applications":[23,35],"that":[24,140],"allow":[25],"from":[26],"visualization":[27,48,138],"to":[28,60,91,123,143,163],"complex":[29,134],"algorithmic":[30],"analysis.":[31],"While":[32],"several":[33],"exist":[36],"with":[37,98,112],"various":[38],"focuses":[39],"on":[40],"creation,":[41],"revision,":[42],"curation,":[43],"storage,":[44],"integration,":[45],"collaboration,":[46],"exploration,":[47],"analysis,":[50],"many":[51],"these":[53],"services":[54],"remain":[55],"disjoint":[56],"have":[58,117,150],"yet":[59],"be":[61,92],"packaged":[62],"into":[63],"a":[64,119,137,152],"cohesive":[65],"environment.Here,":[66],"we":[67,149],"present":[68],"BEL":[69,90],"Commons:":[70],"an":[71],"integrative":[72],"discovery":[74],"environment":[75],"for":[76,156],"encoded":[78],"Biological":[81],"Expression":[82],"Language":[83],"(BEL).":[84],"Users":[85],"can":[86,104],"upload":[87],"files":[88],"parsed,":[93],"validated,":[94],"compiled":[95],"stored":[97],"fine":[99],"granular":[100],"permissions.":[101],"After,":[102],"users":[103,125],"summarize,":[105],"explore":[106,144],"optionally":[108],"shared":[109],"their":[110,145],"scientific":[114],"community.":[115],"We":[116],"implemented":[118],"query":[120],"builder":[121],"wizard":[122],"help":[124],"find":[126],"relevant":[128],"portions":[129],"increasingly":[131],"large":[132],"interface":[139],"allows":[141],"them":[142],"resulting":[146],"networks.":[147],"Finally,":[148],"included":[151],"dedicated":[153],"analytical":[154],"service":[155],"performing":[157],"data-driven":[158],"analysis":[159],"support":[164],"hypothesis":[165],"generation.":[166]},"counts_by_year":[{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":7}],"updated_date":"2026-07-22T07:51:19.307946","created_date":"2025-10-10T00:00:00"}
