{"id":"https://openalex.org/W2906067089","doi":"https://doi.org/10.1093/database/bay120","title":"Potent pairing: ensemble of long short-term memory networks and support vector machine for chemical-protein relation extraction","display_name":"Potent pairing: ensemble of long short-term memory networks and support vector machine for chemical-protein relation extraction","publication_year":2018,"publication_date":"2018-01-01","ids":{"openalex":"https://openalex.org/W2906067089","doi":"https://doi.org/10.1093/database/bay120","mag":"2906067089","pmid":"https://pubmed.ncbi.nlm.nih.gov/30576487"},"language":"en","primary_location":{"id":"doi:10.1093/database/bay120","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/bay120","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bay120/27329216/bay120.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bay120/27329216/bay120.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5086256360","display_name":"Farrokh Mehryary","orcid":"https://orcid.org/0000-0002-5555-2828"},"institutions":[{"id":"https://openalex.org/I155660961","display_name":"University of Turku","ror":"https://ror.org/05vghhr25","country_code":"FI","type":"education","lineage":["https://openalex.org/I155660961"]}],"countries":["FI"],"is_corresponding":true,"raw_author_name":"Farrokh Mehryary","raw_affiliation_strings":["TurkuNLP group, Department of Future Technologies, University of Turku, Turku, Finland","University of Turku Graduate School, Turku, Finland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"TurkuNLP group, Department of Future Technologies, University of Turku, Turku, Finland","institution_ids":["https://openalex.org/I155660961"]},{"raw_affiliation_string":"University of Turku Graduate School, Turku, Finland","institution_ids":["https://openalex.org/I155660961"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049143500","display_name":"Jari Bj\u00f6rne","orcid":"https://orcid.org/0000-0003-1722-6404"},"institutions":[{"id":"https://openalex.org/I155660961","display_name":"University of Turku","ror":"https://ror.org/05vghhr25","country_code":"FI","type":"education","lineage":["https://openalex.org/I155660961"]},{"id":"https://openalex.org/I183173800","display_name":"Turku Centre for Computer Science","ror":"https://ror.org/00vy7ed73","country_code":"FI","type":"facility","lineage":["https://openalex.org/I130217899","https://openalex.org/I155660961","https://openalex.org/I183173800"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Jari Bj\u00f6rne","raw_affiliation_strings":["Turku Centre for Computer Science, Turku, Finland","TurkuNLP group, Department of Future Technologies, University of Turku, Turku, Finland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Turku Centre for Computer Science, Turku, Finland","institution_ids":["https://openalex.org/I183173800"]},{"raw_affiliation_string":"TurkuNLP group, Department of Future Technologies, University of Turku, Turku, Finland","institution_ids":["https://openalex.org/I155660961"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5105839982","display_name":"Tapio Salakoski","orcid":null},"institutions":[{"id":"https://openalex.org/I155660961","display_name":"University of Turku","ror":"https://ror.org/05vghhr25","country_code":"FI","type":"education","lineage":["https://openalex.org/I155660961"]},{"id":"https://openalex.org/I183173800","display_name":"Turku Centre for Computer Science","ror":"https://ror.org/00vy7ed73","country_code":"FI","type":"facility","lineage":["https://openalex.org/I130217899","https://openalex.org/I155660961","https://openalex.org/I183173800"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Tapio Salakoski","raw_affiliation_strings":["Turku Centre for Computer Science, Turku, Finland","TurkuNLP group, Department of Future Technologies, University of Turku, Turku, Finland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Turku Centre for Computer Science, Turku, Finland","institution_ids":["https://openalex.org/I183173800"]},{"raw_affiliation_string":"TurkuNLP group, Department of Future Technologies, University of Turku, Turku, Finland","institution_ids":["https://openalex.org/I155660961"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5019929457","display_name":"Filip Ginter","orcid":"https://orcid.org/0000-0002-5484-6103"},"institutions":[{"id":"https://openalex.org/I155660961","display_name":"University of Turku","ror":"https://ror.org/05vghhr25","country_code":"FI","type":"education","lineage":["https://openalex.org/I155660961"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Filip Ginter","raw_affiliation_strings":["TurkuNLP group, Department of Future Technologies, University of Turku, Turku, Finland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"TurkuNLP group, Department of Future Technologies, University of Turku, Turku, Finland","institution_ids":["https://openalex.org/I155660961"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5086256360"],"corresponding_institution_ids":["https://openalex.org/I155660961"],"apc_list":{"value":1415,"currency":"GBP","value_usd":1735},"apc_paid":{"value":1415,"currency":"GBP","value_usd":1735},"fwci":0.7218,"has_fulltext":false,"cited_by_count":17,"citation_normalized_percentile":{"value":0.70570057,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"2018","issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9969000220298767,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.983299970626831,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8143531680107117},{"id":"https://openalex.org/keywords/support-vector-machine","display_name":"Support vector machine","score":0.7363533973693848},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.6874092817306519},{"id":"https://openalex.org/keywords/task","display_name":"Task (project management)","score":0.6453043818473816},{"id":"https://openalex.org/keywords/sentence","display_name":"Sentence","score":0.5601323246955872},{"id":"https://openalex.org/keywords/artificial-neural-network","display_name":"Artificial neural network","score":0.5540013313293457},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.5496090054512024},{"id":"https://openalex.org/keywords/relation","display_name":"Relation (database)","score":0.5111628174781799},{"id":"https://openalex.org/keywords/dependency","display_name":"Dependency (UML)","score":0.4796062707901001},{"id":"https://openalex.org/keywords/term","display_name":"Term (time)","score":0.45434141159057617},{"id":"https://openalex.org/keywords/f1-score","display_name":"F1 score","score":0.440137654542923},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.24744093418121338}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8143531680107117},{"id":"https://openalex.org/C12267149","wikidata":"https://www.wikidata.org/wiki/Q282453","display_name":"Support vector machine","level":2,"score":0.7363533973693848},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6874092817306519},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.6453043818473816},{"id":"https://openalex.org/C2777530160","wikidata":"https://www.wikidata.org/wiki/Q41796","display_name":"Sentence","level":2,"score":0.5601323246955872},{"id":"https://openalex.org/C50644808","wikidata":"https://www.wikidata.org/wiki/Q192776","display_name":"Artificial neural network","level":2,"score":0.5540013313293457},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.5496090054512024},{"id":"https://openalex.org/C25343380","wikidata":"https://www.wikidata.org/wiki/Q277521","display_name":"Relation (database)","level":2,"score":0.5111628174781799},{"id":"https://openalex.org/C19768560","wikidata":"https://www.wikidata.org/wiki/Q320727","display_name":"Dependency (UML)","level":2,"score":0.4796062707901001},{"id":"https://openalex.org/C61797465","wikidata":"https://www.wikidata.org/wiki/Q1188986","display_name":"Term (time)","level":2,"score":0.45434141159057617},{"id":"https://openalex.org/C148524875","wikidata":"https://www.wikidata.org/wiki/Q6975395","display_name":"F1 score","level":2,"score":0.440137654542923},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.24744093418121338},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C187736073","wikidata":"https://www.wikidata.org/wiki/Q2920921","display_name":"Management","level":1,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004364","descriptor_name":"Pharmaceutical Preparations","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D004364","descriptor_name":"Pharmaceutical Preparations","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D004364","descriptor_name":"Pharmaceutical Preparations","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D004364","descriptor_name":"Pharmaceutical Preparations","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D004364","descriptor_name":"Pharmaceutical Preparations","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D004364","descriptor_name":"Pharmaceutical Preparations","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D060388","descriptor_name":"Support Vector Machine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D060388","descriptor_name":"Support Vector Machine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D060388","descriptor_name":"Support Vector Machine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D062126","descriptor_name":"Databases, Chemical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D062126","descriptor_name":"Databases, Chemical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D062126","descriptor_name":"Databases, Chemical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/database/bay120","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/bay120","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bay120/27329216/bay120.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},{"id":"pmid:30576487","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/30576487","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database : the journal of biological databases and curation","raw_type":null},{"id":"pmh:oai:europepmc.org:5294475","is_oa":true,"landing_page_url":"http://europepmc.org/pmc/articles/PMC6310522","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:6310522","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6310522","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Database (Oxford)","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/database/bay120","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/bay120","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bay120/27329216/bay120.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Quality Education","score":0.5299999713897705,"id":"https://metadata.un.org/sdg/4"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320322725","display_name":"China Scholarship Council","ror":"https://ror.org/04atp4p48"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":85,"referenced_works":["https://openalex.org/W122290181","https://openalex.org/W150863218","https://openalex.org/W1508977358","https://openalex.org/W1525618684","https://openalex.org/W1979711143","https://openalex.org/W2064030835","https://openalex.org/W2064675550","https://openalex.org/W2095705004","https://openalex.org/W2105842272","https://openalex.org/W2107878631","https://openalex.org/W2112543617","https://openalex.org/W2119821739","https://openalex.org/W2120814856","https://openalex.org/W2131774270","https://openalex.org/W2137052779","https://openalex.org/W2138627627","https://openalex.org/W2148488766","https://openalex.org/W2157331557","https://openalex.org/W2162590473","https://openalex.org/W2163362093","https://openalex.org/W2166111585","https://openalex.org/W2181042685","https://openalex.org/W2250232417","https://openalex.org/W2250619635","https://openalex.org/W2252145363","https://openalex.org/W2311132329","https://openalex.org/W2335791510","https://openalex.org/W2384495648","https://openalex.org/W2485374661","https://openalex.org/W2507883388","https://openalex.org/W2511500211","https://openalex.org/W2511964075","https://openalex.org/W2518463060","https://openalex.org/W2527896214","https://openalex.org/W2557283755","https://openalex.org/W2560748602","https://openalex.org/W2579132201","https://openalex.org/W2587019100","https://openalex.org/W2741379117","https://openalex.org/W2765742249","https://openalex.org/W2785001576","https://openalex.org/W2786559064","https://openalex.org/W2786724030","https://openalex.org/W2790602452","https://openalex.org/W2809349863","https://openalex.org/W2883749461","https://openalex.org/W2963355447","https://openalex.org/W2963572611","https://openalex.org/W2964193968","https://openalex.org/W2964217331","https://openalex.org/W2964348125","https://openalex.org/W4239510810","https://openalex.org/W4249572517","https://openalex.org/W4285719527","https://openalex.org/W4294170691","https://openalex.org/W6631551618","https://openalex.org/W6658704000","https://openalex.org/W6674330103","https://openalex.org/W6675783020","https://openalex.org/W6675802400","https://openalex.org/W6677964646","https://openalex.org/W6680751261","https://openalex.org/W6682007918","https://openalex.org/W6682691769","https://openalex.org/W6683258052","https://openalex.org/W6683883671","https://openalex.org/W6685683567","https://openalex.org/W6686291579","https://openalex.org/W6691503590","https://openalex.org/W6691778492","https://openalex.org/W6698490408","https://openalex.org/W6724847271","https://openalex.org/W6725579993","https://openalex.org/W6725820063","https://openalex.org/W6726890095","https://openalex.org/W6728098186","https://openalex.org/W6731916477","https://openalex.org/W6733081445","https://openalex.org/W6739183500","https://openalex.org/W6742368032","https://openalex.org/W6747927332","https://openalex.org/W6748512862","https://openalex.org/W6752814086","https://openalex.org/W6766111062","https://openalex.org/W6940158366"],"related_works":["https://openalex.org/W2090763504","https://openalex.org/W2067317451","https://openalex.org/W2154771632","https://openalex.org/W4211085505","https://openalex.org/W148178222","https://openalex.org/W2375873920","https://openalex.org/W2084758217","https://openalex.org/W3122478268","https://openalex.org/W2104657898","https://openalex.org/W408804804"],"abstract_inverted_index":{"Biomedical":[0],"researchers":[1],"regularly":[2],"discover":[3],"new":[4,110],"interactions":[5,21,60],"between":[6],"chemical":[7],"compounds/drugs":[8],"and":[9,11,33,46,55,76,82,123,136,162,188],"genes/proteins,":[10],"report":[12],"them":[13],"in":[14,25,66,198,242],"research":[15,27],"literature.":[16,63],"Having":[17],"knowledge":[18],"about":[19],"these":[20],"is":[22,237],"crucially":[23],"important":[24],"many":[26],"areas":[28],"such":[29,59],"as":[30,239],"precision":[31],"medicine":[32],"drug":[34],"discovery.":[35],"The":[36],"BioCreative":[37,207],"VI":[38,208],"Task":[39,209],"5":[40],"(CHEMPROT)":[41],"challenge":[42,68],"promotes":[43],"the":[44,89,92,99,102,118,147,152,157,160,163,173,194,206,228],"development":[45],"evaluation":[47],"of":[48,58,86,101,132,159,170,220,222,227],"computer":[49],"systems":[50,125,184,195],"that":[51,115,193],"can":[52,212],"automatically":[53],"recognize":[54],"extract":[56,217],"statements":[57],"from":[61],"biomedical":[62],"We":[64,191],"participated":[65],"this":[67,199],"with":[69,224],"a":[70,77,109,233,243],"Support":[71],"Vector":[72],"Machine":[73],"(SVM)":[74],"system":[75,80,113],"deep":[78,111],"learning-based":[79,112],"(ST-ANN),":[81],"achieved":[83,167],"an":[84,130,168],"F-score":[85,169,178],"60.99":[87],"for":[88,145,172],"task.":[90],"After":[91],"shared":[93],"task,":[94,174],"we":[95,106,166,196],"have":[96,107],"significantly":[97],"improved":[98],"performance":[100],"ST-ANN":[103,119,122],"system.":[104,120],"Additionally,":[105],"developed":[108],"(I-ANN)":[114],"considerably":[116],"outperforms":[117],"Both":[121],"I-ANN":[124,164],"are":[126,185,201],"centered":[127],"around":[128],"training":[129,240],"ensemble":[131],"artificial":[133],"neural":[134],"networks":[135],"utilizing":[137],"different":[138],"bidirectional":[139],"Long":[140],"Short-Term":[141],"Memory":[142],"(LSTM)":[143],"chains":[144],"representing":[146],"shortest":[148],"dependency":[149],"path":[150],"and/or":[151],"full":[153],"sentence.":[154],"By":[155],"combining":[156],"predictions":[158],"SVM":[161],"systems,":[165],"63.10":[171],"improving":[175],"our":[176],"previous":[177],"by":[179],"2.11":[180],"percentage":[181],"points.":[182],"Our":[183],"fully":[186],"open-source":[187],"publicly":[189],"available.":[190],"highlight":[192],"present":[197],"study":[200],"not":[202],"applicable":[203],"only":[204],"to":[205,216],"5,":[210],"but":[211],"be":[213],"effortlessly":[214],"re-trained":[215],"any":[218],"types":[219],"relations":[221],"interest,":[223],"no":[225],"modifications":[226],"source":[229],"code":[230],"required,":[231],"if":[232],"manually":[234],"annotated":[235],"corpus":[236],"provided":[238],"data":[241],"specific":[244],"file":[245],"format.":[246]},"counts_by_year":[{"year":2024,"cited_by_count":6},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":1},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":5}],"updated_date":"2026-05-19T21:40:30.786675","created_date":"2025-10-10T00:00:00"}
