{"id":"https://openalex.org/W2806816485","doi":"https://doi.org/10.1093/database/bay099","title":"Tripal Developer Toolkit","display_name":"Tripal Developer Toolkit","publication_year":2018,"publication_date":"2018-01-01","ids":{"openalex":"https://openalex.org/W2806816485","doi":"https://doi.org/10.1093/database/bay099","mag":"2806816485","pmid":"https://pubmed.ncbi.nlm.nih.gov/30295719"},"language":"en","primary_location":{"id":"doi:10.1093/database/bay099","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/bay099","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bay099/27329190/bay099.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bay099/27329190/bay099.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5034043439","display_name":"Bradford Condon","orcid":"https://orcid.org/0000-0003-4377-9205"},"institutions":[{"id":"https://openalex.org/I75027704","display_name":"University of Tennessee at Knoxville","ror":"https://ror.org/020f3ap87","country_code":"US","type":"education","lineage":["https://openalex.org/I75027704"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Bradford Condon","raw_affiliation_strings":["Department of Entomology and Plant Pathology, University of Tennessee Institute of Agriculture, E.J. Chapman Blvd, 370 Plant Biotechnology Building, Knoxville, TN"],"affiliations":[{"raw_affiliation_string":"Department of Entomology and Plant Pathology, University of Tennessee Institute of Agriculture, E.J. Chapman Blvd, 370 Plant Biotechnology Building, Knoxville, TN","institution_ids":["https://openalex.org/I75027704"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071568297","display_name":"Abdullah Almsaeed","orcid":"https://orcid.org/0000-0002-3804-1188"},"institutions":[{"id":"https://openalex.org/I75027704","display_name":"University of Tennessee at Knoxville","ror":"https://ror.org/020f3ap87","country_code":"US","type":"education","lineage":["https://openalex.org/I75027704"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Abdullah Almsaeed","raw_affiliation_strings":["Department of Entomology and Plant Pathology, University of Tennessee Institute of Agriculture, E.J. Chapman Blvd, 370 Plant Biotechnology Building, Knoxville, TN"],"affiliations":[{"raw_affiliation_string":"Department of Entomology and Plant Pathology, University of Tennessee Institute of Agriculture, E.J. Chapman Blvd, 370 Plant Biotechnology Building, Knoxville, TN","institution_ids":["https://openalex.org/I75027704"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100423262","display_name":"Ming Chen","orcid":"https://orcid.org/0000-0002-3164-8884"},"institutions":[{"id":"https://openalex.org/I75027704","display_name":"University of Tennessee at Knoxville","ror":"https://ror.org/020f3ap87","country_code":"US","type":"education","lineage":["https://openalex.org/I75027704"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ming Chen","raw_affiliation_strings":["Department of Entomology and Plant Pathology, University of Tennessee Institute of Agriculture, E.J. Chapman Blvd, 370 Plant Biotechnology Building, Knoxville, TN","Graduate School of Genome Science and Technology, University of Tennessee, Knoxville, M411 Walters Life Science, Knoxville, TN"],"affiliations":[{"raw_affiliation_string":"Department of Entomology and Plant Pathology, University of Tennessee Institute of Agriculture, E.J. Chapman Blvd, 370 Plant Biotechnology Building, Knoxville, TN","institution_ids":["https://openalex.org/I75027704"]},{"raw_affiliation_string":"Graduate School of Genome Science and Technology, University of Tennessee, Knoxville, M411 Walters Life Science, Knoxville, TN","institution_ids":["https://openalex.org/I75027704"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029918292","display_name":"Joe West","orcid":"https://orcid.org/0000-0002-1135-9356"},"institutions":[{"id":"https://openalex.org/I75027704","display_name":"University of Tennessee at Knoxville","ror":"https://ror.org/020f3ap87","country_code":"US","type":"education","lineage":["https://openalex.org/I75027704"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Joe West","raw_affiliation_strings":["Department of Entomology and Plant Pathology, University of Tennessee Institute of Agriculture, E.J. Chapman Blvd, 370 Plant Biotechnology Building, Knoxville, TN"],"affiliations":[{"raw_affiliation_string":"Department of Entomology and Plant Pathology, University of Tennessee Institute of Agriculture, E.J. Chapman Blvd, 370 Plant Biotechnology Building, Knoxville, TN","institution_ids":["https://openalex.org/I75027704"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5021572745","display_name":"Margaret Staton","orcid":"https://orcid.org/0000-0003-2971-9353"},"institutions":[{"id":"https://openalex.org/I75027704","display_name":"University of Tennessee at Knoxville","ror":"https://ror.org/020f3ap87","country_code":"US","type":"education","lineage":["https://openalex.org/I75027704"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Margaret Staton","raw_affiliation_strings":["Department of Entomology and Plant Pathology, University of Tennessee Institute of Agriculture, E.J. Chapman Blvd, 370 Plant Biotechnology Building, Knoxville, TN"],"affiliations":[{"raw_affiliation_string":"Department of Entomology and Plant Pathology, University of Tennessee Institute of Agriculture, E.J. Chapman Blvd, 370 Plant Biotechnology Building, Knoxville, TN","institution_ids":["https://openalex.org/I75027704"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5021572745"],"corresponding_institution_ids":["https://openalex.org/I75027704"],"apc_list":{"value":1415,"currency":"GBP","value_usd":1735},"apc_paid":{"value":1415,"currency":"GBP","value_usd":1735},"fwci":0.5848,"has_fulltext":true,"cited_by_count":3,"citation_normalized_percentile":{"value":0.71008571,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"2018","issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10715","display_name":"Distributed and Parallel Computing Systems","score":0.9526000022888184,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10715","display_name":"Distributed and Parallel Computing Systems","score":0.9526000022888184,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9320999979972839,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T11975","display_name":"Evolutionary Algorithms and Applications","score":0.9302999973297119,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6992155313491821},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.5481274127960205},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.3871401250362396},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.3712855577468872},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.3701817989349365}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6992155313491821},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.5481274127960205},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.3871401250362396},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.3712855577468872},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.3701817989349365}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014825","descriptor_name":"Vocabulary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014825","descriptor_name":"Vocabulary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014825","descriptor_name":"Vocabulary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/database/bay099","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/bay099","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bay099/27329190/bay099.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},{"id":"pmid:30295719","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/30295719","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database : the journal of biological databases and curation","raw_type":null},{"id":"pmh:oai:europepmc.org:5099616","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6147213","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/database/bay099","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/bay099","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bay099/27329190/bay099.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G3484266289","display_name":null,"funder_award_id":"1443040","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G7618748963","display_name":null,"funder_award_id":"1444573","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320309913","display_name":"Washington State University","ror":"https://ror.org/05dk0ce17"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2806816485.pdf","grobid_xml":"https://content.openalex.org/works/W2806816485.grobid-xml"},"referenced_works_count":32,"referenced_works":["https://openalex.org/W1574680346","https://openalex.org/W1967204795","https://openalex.org/W1998767819","https://openalex.org/W2001619934","https://openalex.org/W2036288429","https://openalex.org/W2040915209","https://openalex.org/W2091448229","https://openalex.org/W2098229525","https://openalex.org/W2102299167","https://openalex.org/W2151397621","https://openalex.org/W2158714788","https://openalex.org/W2159749953","https://openalex.org/W2160378127","https://openalex.org/W2204108528","https://openalex.org/W2564511910","https://openalex.org/W2785580053","https://openalex.org/W6634553429","https://openalex.org/W6642178877","https://openalex.org/W6649844278","https://openalex.org/W6650842192","https://openalex.org/W6659554579","https://openalex.org/W6660631880","https://openalex.org/W6673516342","https://openalex.org/W6674732472","https://openalex.org/W6675212788","https://openalex.org/W6682604482","https://openalex.org/W6683179228","https://openalex.org/W6683274347","https://openalex.org/W6683549142","https://openalex.org/W6687938326","https://openalex.org/W6730899133","https://openalex.org/W6748637587"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W4391913857","https://openalex.org/W2358668433","https://openalex.org/W4396701345","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W4396696052"],"abstract_inverted_index":{"Tripal":[0,11,56,84],"community":[1,63],"database":[2],"construction":[3],"toolkit":[4],"utilizing":[5],"the":[6,62],"content":[7],"management":[8],"system":[9],"Drupal.":[10],"is":[12,57],"used":[13],"to":[14,42,98],"make":[15,80],"biological,":[16],"genetic":[17],"and":[18,25,45,53,66,82,90,105,109,118],"genomic":[19],"data":[20],"more":[21],"discoverable,":[22],"shareable,":[23],"searchable":[24],"standardized.":[26],"As":[27],"funding":[28],"for":[29,40,88],"community-level":[30],"genomics":[31],"databases":[32],"declines,":[33],"Tripal's":[34],"open-source":[35],"codebase":[36],"provides":[37],"a":[38,48,73],"means":[39],"sites":[41,65,86],"be":[43],"built":[44],"maintained":[46],"with":[47,114],"minimal":[49],"investment":[50],"in":[51],"staff":[52],"new":[54,89,120],"development.":[55],"ultimately":[58],"as":[59,61,101],"strong":[60],"of":[64,75],"developers":[67],"that":[68,78],"use":[69],"it.":[70],"We":[71],"present":[72],"set":[74],"developer":[76,104],"tools":[77,94],"will":[79],"building":[81],"maintaining":[83],"3":[85],"easier":[87],"returning":[91],"users.":[92],"These":[93],"break":[95],"down":[96],"barriers":[97],"entry":[99],"such":[100],"setting":[102],"up":[103],"testing":[106],"environments,":[107],"acquiring":[108],"loading":[110],"test":[111],"datasets,":[112],"working":[113],"controlled":[115],"vocabulary":[116],"terms":[117],"writing":[119],"Drupal":[121],"classes.":[122]},"counts_by_year":[{"year":2021,"cited_by_count":1},{"year":2019,"cited_by_count":2}],"updated_date":"2026-03-10T16:38:18.471706","created_date":"2025-10-10T00:00:00"}
