{"id":"https://openalex.org/W2894374770","doi":"https://doi.org/10.1093/database/bay098","title":"Large-scale automated machine reading discovers new cancer-driving mechanisms","display_name":"Large-scale automated machine reading discovers new cancer-driving mechanisms","publication_year":2018,"publication_date":"2018-01-01","ids":{"openalex":"https://openalex.org/W2894374770","doi":"https://doi.org/10.1093/database/bay098","mag":"2894374770","pmid":"https://pubmed.ncbi.nlm.nih.gov/30256986"},"language":"en","primary_location":{"id":"doi:10.1093/database/bay098","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/bay098","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bay098/27329104/bay098.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bay098/27329104/bay098.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5066447249","display_name":"Marco A. Valenzuela-Esc\u00e1rcega","orcid":null},"institutions":[{"id":"https://openalex.org/I138006243","display_name":"University of Arizona","ror":"https://ror.org/03m2x1q45","country_code":"US","type":"education","lineage":["https://openalex.org/I138006243"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Marco A Valenzuela-Esc\u00e1rcega","raw_affiliation_strings":["Department of Computer Science, University of Arizona, Tucson, AZ, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Arizona, Tucson, AZ, USA","institution_ids":["https://openalex.org/I138006243"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006448195","display_name":"\u00d6zg\u00fcn Babur","orcid":"https://orcid.org/0000-0002-0239-5259"},"institutions":[{"id":"https://openalex.org/I165690674","display_name":"Oregon Health & Science University","ror":"https://ror.org/009avj582","country_code":"US","type":"education","lineage":["https://openalex.org/I165690674"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"\u00d6zg\u00fcn Babur","raw_affiliation_strings":["School of Medicine, Oregon Health & Science University, Portland, OR, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Medicine, Oregon Health & Science University, Portland, OR, USA","institution_ids":["https://openalex.org/I165690674"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5030626360","display_name":"Gus Hahn-Powell","orcid":"https://orcid.org/0000-0002-7957-3586"},"institutions":[{"id":"https://openalex.org/I138006243","display_name":"University of Arizona","ror":"https://ror.org/03m2x1q45","country_code":"US","type":"education","lineage":["https://openalex.org/I138006243"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Gus Hahn-Powell","raw_affiliation_strings":["Department of Linguistics, University of Arizona, Tucson, AZ, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Linguistics, University of Arizona, Tucson, AZ, USA","institution_ids":["https://openalex.org/I138006243"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023662337","display_name":"Dane Bell","orcid":"https://orcid.org/0000-0002-7462-0208"},"institutions":[{"id":"https://openalex.org/I138006243","display_name":"University of Arizona","ror":"https://ror.org/03m2x1q45","country_code":"US","type":"education","lineage":["https://openalex.org/I138006243"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Dane Bell","raw_affiliation_strings":["Department of Linguistics, University of Arizona, Tucson, AZ, USA"],"raw_orcid":"https://orcid.org/0000-0002-7462-0208","affiliations":[{"raw_affiliation_string":"Department of Linguistics, University of Arizona, Tucson, AZ, USA","institution_ids":["https://openalex.org/I138006243"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014423427","display_name":"Thomas Hicks","orcid":null},"institutions":[{"id":"https://openalex.org/I138006243","display_name":"University of Arizona","ror":"https://ror.org/03m2x1q45","country_code":"US","type":"education","lineage":["https://openalex.org/I138006243"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Thomas Hicks","raw_affiliation_strings":["Department of Computer Science, University of Arizona, Tucson, AZ, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Arizona, Tucson, AZ, USA","institution_ids":["https://openalex.org/I138006243"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042363520","display_name":"Enrique Noriega-Atala","orcid":"https://orcid.org/0000-0001-7150-2989"},"institutions":[{"id":"https://openalex.org/I138006243","display_name":"University of Arizona","ror":"https://ror.org/03m2x1q45","country_code":"US","type":"education","lineage":["https://openalex.org/I138006243"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Enrique Noriega-Atala","raw_affiliation_strings":["School of Information, University of Arizona, Tucson, AZ, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Information, University of Arizona, Tucson, AZ, USA","institution_ids":["https://openalex.org/I138006243"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100397933","display_name":"Xia Wang","orcid":"https://orcid.org/0000-0003-1960-4157"},"institutions":[{"id":"https://openalex.org/I138006243","display_name":"University of Arizona","ror":"https://ror.org/03m2x1q45","country_code":"US","type":"education","lineage":["https://openalex.org/I138006243"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Xia Wang","raw_affiliation_strings":["Department of Molecular and Cellular Biology, University of Arizona, Tucson, AZ, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Molecular and Cellular Biology, University of Arizona, Tucson, AZ, USA","institution_ids":["https://openalex.org/I138006243"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047699502","display_name":"Mihai Surdeanu","orcid":"https://orcid.org/0000-0001-6956-8030"},"institutions":[{"id":"https://openalex.org/I138006243","display_name":"University of Arizona","ror":"https://ror.org/03m2x1q45","country_code":"US","type":"education","lineage":["https://openalex.org/I138006243"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Mihai Surdeanu","raw_affiliation_strings":["Department of Computer Science, University of Arizona, Tucson, AZ, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Arizona, Tucson, AZ, USA","institution_ids":["https://openalex.org/I138006243"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037803004","display_name":"Emek Demir","orcid":"https://orcid.org/0000-0002-3663-7113"},"institutions":[{"id":"https://openalex.org/I165690674","display_name":"Oregon Health & Science University","ror":"https://ror.org/009avj582","country_code":"US","type":"education","lineage":["https://openalex.org/I165690674"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Emek Demir","raw_affiliation_strings":["School of Medicine, Oregon Health & Science University, Portland, OR, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Medicine, Oregon Health & Science University, Portland, OR, USA","institution_ids":["https://openalex.org/I165690674"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5017273810","display_name":"Clayton T. Morrison","orcid":"https://orcid.org/0000-0002-3606-0078"},"institutions":[{"id":"https://openalex.org/I138006243","display_name":"University of Arizona","ror":"https://ror.org/03m2x1q45","country_code":"US","type":"education","lineage":["https://openalex.org/I138006243"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Clayton T Morrison","raw_affiliation_strings":["School of Information, University of Arizona, Tucson, AZ, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Information, University of Arizona, Tucson, AZ, USA","institution_ids":["https://openalex.org/I138006243"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":10,"corresponding_author_ids":["https://openalex.org/A5023662337"],"corresponding_institution_ids":["https://openalex.org/I138006243"],"apc_list":{"value":1415,"currency":"GBP","value_usd":1735},"apc_paid":{"value":1415,"currency":"GBP","value_usd":1735},"fwci":3.6303,"has_fulltext":false,"cited_by_count":75,"citation_normalized_percentile":{"value":0.94161885,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":100},"biblio":{"volume":"2018","issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10252","display_name":"Microbial Natural Products and Biosynthesis","score":0.9973000288009644,"subfield":{"id":"https://openalex.org/subfields/2736","display_name":"Pharmacology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7876888513565063},{"id":"https://openalex.org/keywords/reading","display_name":"Reading (process)","score":0.6045072078704834},{"id":"https://openalex.org/keywords/limiting","display_name":"Limiting","score":0.575904130935669},{"id":"https://openalex.org/keywords/big-data","display_name":"Big data","score":0.5705769062042236},{"id":"https://openalex.org/keywords/scale","display_name":"Scale (ratio)","score":0.5125877261161804},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.48091885447502136},{"id":"https://openalex.org/keywords/domain","display_name":"Domain (mathematical analysis)","score":0.46161019802093506},{"id":"https://openalex.org/keywords/mechanism","display_name":"Mechanism (biology)","score":0.44670164585113525},{"id":"https://openalex.org/keywords/downstream","display_name":"Downstream (manufacturing)","score":0.44348791241645813},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4230017364025116},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.3652735948562622},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3054544925689697}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7876888513565063},{"id":"https://openalex.org/C554936623","wikidata":"https://www.wikidata.org/wiki/Q199657","display_name":"Reading (process)","level":2,"score":0.6045072078704834},{"id":"https://openalex.org/C188198153","wikidata":"https://www.wikidata.org/wiki/Q1613840","display_name":"Limiting","level":2,"score":0.575904130935669},{"id":"https://openalex.org/C75684735","wikidata":"https://www.wikidata.org/wiki/Q858810","display_name":"Big data","level":2,"score":0.5705769062042236},{"id":"https://openalex.org/C2778755073","wikidata":"https://www.wikidata.org/wiki/Q10858537","display_name":"Scale (ratio)","level":2,"score":0.5125877261161804},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.48091885447502136},{"id":"https://openalex.org/C36503486","wikidata":"https://www.wikidata.org/wiki/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.46161019802093506},{"id":"https://openalex.org/C89611455","wikidata":"https://www.wikidata.org/wiki/Q6804646","display_name":"Mechanism (biology)","level":2,"score":0.44670164585113525},{"id":"https://openalex.org/C2776207758","wikidata":"https://www.wikidata.org/wiki/Q5303302","display_name":"Downstream (manufacturing)","level":2,"score":0.44348791241645813},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4230017364025116},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.3652735948562622},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3054544925689697},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C78519656","wikidata":"https://www.wikidata.org/wiki/Q101333","display_name":"Mechanical engineering","level":1,"score":0.0},{"id":"https://openalex.org/C21547014","wikidata":"https://www.wikidata.org/wiki/Q1423657","display_name":"Operations management","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001331","descriptor_name":"Automation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001331","descriptor_name":"Automation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001331","descriptor_name":"Automation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011642","descriptor_name":"Publications","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011642","descriptor_name":"Publications","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011642","descriptor_name":"Publications","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/database/bay098","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/bay098","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bay098/27329104/bay098.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},{"id":"pmid:30256986","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/30256986","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database : the journal of biological databases and curation","raw_type":null},{"id":"pmh:oai:europepmc.org:5114368","is_oa":true,"landing_page_url":"http://europepmc.org/pmc/articles/PMC6156821","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:6156821","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6156821","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Database (Oxford)","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/database/bay098","is_oa":true,"landing_page_url":"https://doi.org/10.1093/database/bay098","pdf_url":"https://academic.oup.com/database/article-pdf/doi/10.1093/database/bay098/27329104/bay098.pdf","source":{"id":"https://openalex.org/S4210201630","display_name":"Database","issn_l":"1758-0463","issn":["1758-0463"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311647","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/P4310311647"],"host_organization_lineage_names":["University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Database","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/4","score":0.8399999737739563,"display_name":"Quality Education"}],"awards":[{"id":"https://openalex.org/G451797860","display_name":null,"funder_award_id":"ARO W911NF-14-1-0395","funder_id":"https://openalex.org/F4320332180","funder_display_name":"Defense Advanced Research Projects Agency"}],"funders":[{"id":"https://openalex.org/F4320310160","display_name":"University of Arizona","ror":"https://ror.org/03m2x1q45"},{"id":"https://openalex.org/F4320332180","display_name":"Defense Advanced Research Projects Agency","ror":"https://ror.org/02caytj08"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2894374770.pdf","grobid_xml":"https://content.openalex.org/works/W2894374770.grobid-xml"},"referenced_works_count":53,"referenced_works":["https://openalex.org/W76749362","https://openalex.org/W580573057","https://openalex.org/W943972918","https://openalex.org/W1602846073","https://openalex.org/W1632114991","https://openalex.org/W1874869336","https://openalex.org/W1954715867","https://openalex.org/W1969709265","https://openalex.org/W2003185534","https://openalex.org/W2032566933","https://openalex.org/W2036904266","https://openalex.org/W2058539819","https://openalex.org/W2071877188","https://openalex.org/W2075655036","https://openalex.org/W2097300420","https://openalex.org/W2104846587","https://openalex.org/W2105508573","https://openalex.org/W2106921868","https://openalex.org/W2107598941","https://openalex.org/W2108706252","https://openalex.org/W2110408238","https://openalex.org/W2116944463","https://openalex.org/W2123442489","https://openalex.org/W2126276057","https://openalex.org/W2126345078","https://openalex.org/W2141811925","https://openalex.org/W2147218300","https://openalex.org/W2152698860","https://openalex.org/W2163107094","https://openalex.org/W2174811574","https://openalex.org/W2229162816","https://openalex.org/W2250469303","https://openalex.org/W2251279337","https://openalex.org/W2251431888","https://openalex.org/W2251644265","https://openalex.org/W2280966365","https://openalex.org/W2531638282","https://openalex.org/W2572006936","https://openalex.org/W2786963443","https://openalex.org/W2914431807","https://openalex.org/W2916355958","https://openalex.org/W2952755768","https://openalex.org/W2962767115","https://openalex.org/W2963267629","https://openalex.org/W2963800132","https://openalex.org/W4293374413","https://openalex.org/W6603123688","https://openalex.org/W6636146974","https://openalex.org/W6636649193","https://openalex.org/W6640904281","https://openalex.org/W6658704000","https://openalex.org/W6675985199","https://openalex.org/W6691834956"],"related_works":["https://openalex.org/W4390608645","https://openalex.org/W1583765404","https://openalex.org/W4405901645","https://openalex.org/W4394895745","https://openalex.org/W4247566972","https://openalex.org/W2960264696","https://openalex.org/W3090563135","https://openalex.org/W2497432351","https://openalex.org/W4206777497","https://openalex.org/W2910064364"],"abstract_inverted_index":{"PubMed,":[0],"a":[1,36,84,115],"repository":[2],"and":[3,82,122],"search":[4],"engine":[5],"for":[6,38],"biomedical":[7,44],"literature,":[8],"now":[9],"indexes":[10],">1":[11],"million":[12],"articles":[13],"each":[14],"year.":[15],"This":[16,100],"exceeds":[17],"the":[18,65],"processing":[19],"capacity":[20],"of":[21,43,51,87,119],"human":[22],"domain":[23],"experts,":[24],"limiting":[25],"our":[26],"ability":[27],"to":[28,114],"truly":[29],"understand":[30],"many":[31],"diseases.":[32],"We":[33,61],"present":[34],"Reach,":[35],"system":[37],"automated,":[39],"large-scale":[40],"machine":[41],"reading":[42],"papers":[45],"that":[46,63,75,103],"can":[47,112],"extract":[48],"mechanistic":[49],"descriptions":[50],"biological":[52,71],"processes":[53,121],"with":[54,69,108],"relatively":[55],"high":[56,59],"precision":[57],"at":[58],"throughput.":[60],"demonstrate":[62],"combining":[64,104],"extracted":[66,109],"pathway":[67],"fragments":[68],"existing":[70],"data":[72],"analysis":[73],"algorithms":[74],"rely":[76],"on":[77],"curated":[78],"models":[79],"helps":[80],"identify":[81],"explain":[83],"large":[85],"number":[86],"previously":[88],"unidentified":[89],"mutually":[90],"exclusive":[91],"altered":[92],"signaling":[93],"pathways":[94],"in":[95],"seven":[96],"different":[97],"cancer":[98],"types.":[99],"work":[101],"shows":[102],"human-curated":[105],"'big":[106,110],"mechanisms'":[107],"data'":[111],"lead":[113],"causal,":[116],"predictive":[117],"understanding":[118],"cellular":[120],"unlock":[123],"important":[124],"downstream":[125],"applications.":[126]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":4},{"year":2024,"cited_by_count":10},{"year":2023,"cited_by_count":8},{"year":2022,"cited_by_count":12},{"year":2021,"cited_by_count":18},{"year":2020,"cited_by_count":9},{"year":2019,"cited_by_count":10},{"year":2018,"cited_by_count":2}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}